RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
HLA-DQA1-206ENST00000482745 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
HLA-DQA1-206ENST00000482745 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
HLA-DQA1-206ENST00000482745 DLEC1Q9Y238 1755 aa13.08□□□□□ -0.32
HLA-DQA1-206ENST00000482745 ZNF652Q9Y2D9 606 aa13.08□□□□□ -0.32
HLA-DQA1-206ENST00000482745 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
HLA-DQA1-206ENST00000482745 CCDC24Q8N4L8 307 aa13.07□□□□□ -0.32
HLA-DQA1-206ENST00000482745 MYL6BP14649 208 aa13.07□□□□□ -0.32
HLA-DQA1-206ENST00000482745 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
HLA-DQA1-206ENST00000482745 BABAM1Q9NWV8 329 aa13.07□□□□□ -0.32
HLA-DQA1-206ENST00000482745 APAF1O14727 1248 aa13.06□□□□□ -0.32
HLA-DQA1-206ENST00000482745 PRR5LQ6MZQ0 368 aa13.06□□□□□ -0.32
HLA-DQA1-206ENST00000482745 ARHGAP27Q6ZUM4 889 aa13.06□□□□□ -0.32
HLA-DQA1-206ENST00000482745 CNBD1Q8NA66 436 aa13.06□□□□□ -0.32
HLA-DQA1-206ENST00000482745 COL11A2P13942 1736 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQA1-206ENST00000482745 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
HLA-DQA1-206ENST00000482745 CLEC4GQ6UXB4 293 aa13.06□□□□□ -0.32
HLA-DQA1-206ENST00000482745 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
HLA-DQA1-206ENST00000482745 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
HLA-DQA1-206ENST00000482745 NUP98P52948 1817 aa13.05□□□□□ -0.32
HLA-DQA1-206ENST00000482745 H0YIN7 160 aa13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 ST5P78524 1137 aa13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 HLFQ16534 295 aa13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 KIF6Q6ZMV9 814 aa13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 NBPF5PQ86XG9 351 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 NIP7Q9Y221 180 aaKnown RBP eCLIP13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 CHL1O00533 1208 aa13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 NECTIN2Q92692 538 aa13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 ADCY9O60503 1353 aa13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 CACNA1SQ13698 1873 aa13.04□□□□□ -0.32
HLA-DQA1-206ENST00000482745 FAM177BA6PVY3 158 aa13.03□□□□□ -0.32
HLA-DQA1-206ENST00000482745 PDE6BP35913 854 aa13.03□□□□□ -0.32
HLA-DQA1-206ENST00000482745 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
HLA-DQA1-206ENST00000482745 TTLL7Q6ZT98 887 aa13.03□□□□□ -0.32
HLA-DQA1-206ENST00000482745 BRIP1Q9BX63 1249 aa13.03□□□□□ -0.32
HLA-DQA1-206ENST00000482745 ZBTB3Q9H5J0 574 aa13.03□□□□□ -0.32
HLA-DQA1-206ENST00000482745 ZNF526Q8TF50 670 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQA1-206ENST00000482745 MAP3K15Q6ZN16 1313 aa13.03□□□□□ -0.32
HLA-DQA1-206ENST00000482745 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.33
HLA-DQA1-206ENST00000482745 RGL2O15211 777 aa13.02□□□□□ -0.33
HLA-DQA1-206ENST00000482745 ANXA1P04083 346 aa13.02□□□□□ -0.33
HLA-DQA1-206ENST00000482745 TTLL6Q8N841 843 aa13.02□□□□□ -0.33
HLA-DQA1-206ENST00000482745 ZNF622Q969S3 477 aaKnown RBP eCLIP13.02□□□□□ -0.33
HLA-DQA1-206ENST00000482745 PROSER3Q2NL68 480 aa13.01□□□□□ -0.33
HLA-DQA1-206ENST00000482745 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
HLA-DQA1-206ENST00000482745 ERVV-1B6SEH8 477 aa13.01□□□□□ -0.33
HLA-DQA1-206ENST00000482745 PPP4R2Q9NY27 417 aa13.01□□□□□ -0.33
HLA-DQA1-206ENST00000482745 PDIA6Q15084 440 aa13□□□□□ -0.33
HLA-DQA1-206ENST00000482745 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
HLA-DQA1-206ENST00000482745 MBIPQ9NS73 344 aa13□□□□□ -0.33
HLA-DQA1-206ENST00000482745 PDZRN3Q9UPQ7 1066 aa13□□□□□ -0.33
HLA-DQA1-206ENST00000482745 GPTP24298 496 aa13□□□□□ -0.33
HLA-DQA1-206ENST00000482745 GTF2E1P29083 439 aaPredicted RBP13□□□□□ -0.33
HLA-DQA1-206ENST00000482745 CALD1Q05682 793 aaKnown RBP13□□□□□ -0.33
HLA-DQA1-206ENST00000482745 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
HLA-DQA1-206ENST00000482745 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
HLA-DQA1-206ENST00000482745 HDGFL1Q5TGJ6 251 aa12.99□□□□□ -0.33
HLA-DQA1-206ENST00000482745 SBF1O95248 1867 aa12.99□□□□□ -0.33
HLA-DQA1-206ENST00000482745 ARFGEF2Q9Y6D5 1785 aa12.99□□□□□ -0.33
HLA-DQA1-206ENST00000482745 TNRC6CQ9HCJ0 1690 aaKnown RBP12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 GNAI1P63096 354 aa12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 RASSF7Q02833 373 aa12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 AIMP1Q12904 312 aaKnown RBP12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 C9orf131Q5VYM1 1079 aa12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 LRP10Q7Z4F1 713 aa12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 IFT57Q9NWB7 429 aa12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 CHPF2Q9P2E5 772 aa12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 ANKRD36CQ5JPF3 1778 aa12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 UBN2Q6ZU65 1347 aa12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 NYXQ9GZU5 481 aa12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 RNF181Q9P0P0 153 aa12.98□□□□□ -0.33
HLA-DQA1-206ENST00000482745 SLX4Q8IY92 1834 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 HOXB7P09629 217 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 ZNF853P0CG23 659 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 SRGNP10124 158 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 DUSP27Q5VZP5 1158 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 GIGYF2Q6Y7W6 1299 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 COPS6Q7L5N1 327 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 NUTM1Q86Y26 1132 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 XAGE3Q8WTP9 111 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 MASTLQ96GX5 879 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 DDX21Q9NR30 783 aaKnown RBP eCLIP12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 STYK1Q6J9G0 422 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
HLA-DQA1-206ENST00000482745 C21orf2O43822 256 aa12.96□□□□□ -0.33
HLA-DQA1-206ENST00000482745 PRPF40BQ6NWY9 871 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-206ENST00000482745 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQA1-206ENST00000482745 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.34
HLA-DQA1-206ENST00000482745 ERFEQ4G0M1 354 aa12.95□□□□□ -0.34
HLA-DQA1-206ENST00000482745 SUSD4Q5VX71 490 aa12.95□□□□□ -0.34
HLA-DQA1-206ENST00000482745 ZNF34Q8IZ26 560 aa12.95□□□□□ -0.34
HLA-DQA1-206ENST00000482745 IBTKQ9P2D0 1353 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQA1-206ENST00000482745 FER1L6Q2WGJ9 1857 aa12.95□□□□□ -0.34
HLA-DQA1-206ENST00000482745 TIAM2Q8IVF5 1701 aa12.95□□□□□ -0.34
HLA-DQA1-206ENST00000482745 NPR1P16066 1061 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms