RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ST5P78524 1137 aa15.5■□□□□ 0.07
HMGN1-213ENST00000482192 C2CD5Q86YS7 1000 aa15.5■□□□□ 0.07
HMGN1-213ENST00000482192 NGEFQ8N5V2 710 aa15.5■□□□□ 0.07
HMGN1-213ENST00000482192 PDZRN3Q9UPQ7 1066 aa15.5■□□□□ 0.07
HMGN1-213ENST00000482192 NIP7Q9Y221 180 aaKnown RBP eCLIP15.5■□□□□ 0.07
HMGN1-213ENST00000482192 UTRNP46939 3433 aa15.49■□□□□ 0.07
HMGN1-213ENST00000482192 MAP3K15Q6ZN16 1313 aa15.49■□□□□ 0.07
HMGN1-213ENST00000482192 H0YIN7 160 aa15.49■□□□□ 0.07
HMGN1-213ENST00000482192 EIF2S2P20042 333 aaKnown RBP15.49■□□□□ 0.07
HMGN1-213ENST00000482192 PDE6BP35913 854 aa15.49■□□□□ 0.07
HMGN1-213ENST00000482192 NBPF5PQ86XG9 351 aaPredicted RBP15.49■□□□□ 0.07
HMGN1-213ENST00000482192 HOXB7P09629 217 aa15.48■□□□□ 0.07
HMGN1-213ENST00000482192 HLFQ16534 295 aa15.48■□□□□ 0.07
HMGN1-213ENST00000482192 ARHGAP27Q6ZUM4 889 aa15.48■□□□□ 0.07
HMGN1-213ENST00000482192 IFT57Q9NWB7 429 aa15.48■□□□□ 0.07
HMGN1-213ENST00000482192 DLEC1Q9Y238 1755 aa15.48■□□□□ 0.07
HMGN1-213ENST00000482192 ADCY9O60503 1353 aa15.48■□□□□ 0.07
HMGN1-213ENST00000482192 GNAI1P63096 354 aa15.47■□□□□ 0.07
HMGN1-213ENST00000482192 PDIA6Q15084 440 aa15.47■□□□□ 0.07
HMGN1-213ENST00000482192 KRT24Q2M2I5 525 aa15.47■□□□□ 0.07
HMGN1-213ENST00000482192 TPTE2Q6XPS3 522 aa15.47■□□□□ 0.07
HMGN1-213ENST00000482192 TTLL7Q6ZT98 887 aa15.47■□□□□ 0.07
HMGN1-213ENST00000482192 CCDC24Q8N4L8 307 aa15.47■□□□□ 0.07
HMGN1-213ENST00000482192 ZBTB3Q9H5J0 574 aa15.47■□□□□ 0.07
HMGN1-213ENST00000482192 MBIPQ9NS73 344 aa15.47■□□□□ 0.07
HMGN1-213ENST00000482192 ATP10DQ9P241 1426 aa15.47■□□□□ 0.07
HMGN1-213ENST00000482192 ARFGEF1Q9Y6D6 1849 aa15.47■□□□□ 0.07
HMGN1-213ENST00000482192 ZNF853P0CG23 659 aa15.46■□□□□ 0.07
HMGN1-213ENST00000482192 LRP10Q7Z4F1 713 aa15.46■□□□□ 0.07
HMGN1-213ENST00000482192 TTLL6Q8N841 843 aa15.46■□□□□ 0.07
HMGN1-213ENST00000482192 ANKRD31Q8N7Z5 1873 aa15.46■□□□□ 0.06
HMGN1-213ENST00000482192 CCDC27Q2M243 656 aa15.45■□□□□ 0.06
HMGN1-213ENST00000482192 PROSER3Q2NL68 480 aa15.45■□□□□ 0.06
HMGN1-213ENST00000482192 HDGFL1Q5TGJ6 251 aa15.45■□□□□ 0.06
HMGN1-213ENST00000482192 NECTIN2Q92692 538 aa15.45■□□□□ 0.06
HMGN1-213ENST00000482192 DDX21Q9NR30 783 aaKnown RBP eCLIP15.45■□□□□ 0.06
HMGN1-213ENST00000482192 GOLGB1Q14789 3259 aaKnown RBP15.44■□□□□ 0.06
HMGN1-213ENST00000482192 ANXA1P04083 346 aa15.44■□□□□ 0.06
HMGN1-213ENST00000482192 NYXQ9GZU5 481 aa15.44■□□□□ 0.06
HMGN1-213ENST00000482192 COL11A2P13942 1736 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-213ENST00000482192 FAM177BA6PVY3 158 aa15.43■□□□□ 0.06
HMGN1-213ENST00000482192 GTF2E1P29083 439 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-213ENST00000482192 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
HMGN1-213ENST00000482192 DUSP27Q5VZP5 1158 aa15.43■□□□□ 0.06
HMGN1-213ENST00000482192 STYK1Q6J9G0 422 aa15.43■□□□□ 0.06
HMGN1-213ENST00000482192 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
HMGN1-213ENST00000482192 ZNF622Q969S3 477 aaKnown RBP eCLIP15.43■□□□□ 0.06
HMGN1-213ENST00000482192 CHPF2Q9P2E5 772 aa15.43■□□□□ 0.06
HMGN1-213ENST00000482192 IBTKQ9P2D0 1353 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-213ENST00000482192 SRGNP10124 158 aa15.42■□□□□ 0.06
HMGN1-213ENST00000482192 GPTP24298 496 aa15.42■□□□□ 0.06
HMGN1-213ENST00000482192 COPS6Q7L5N1 327 aa15.42■□□□□ 0.06
HMGN1-213ENST00000482192 ZNF34Q8IZ26 560 aa15.42■□□□□ 0.06
HMGN1-213ENST00000482192 XAGE3Q8WTP9 111 aa15.42■□□□□ 0.06
HMGN1-213ENST00000482192 CNKSR1Q969H4 720 aa15.42■□□□□ 0.06
HMGN1-213ENST00000482192 MASTLQ96GX5 879 aa15.42■□□□□ 0.06
HMGN1-213ENST00000482192 DBF4Q9UBU7 674 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-213ENST00000482192 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
HMGN1-213ENST00000482192 KLRG2A4D1S0 409 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-213ENST00000482192 WWC1Q8IX03 1113 aa15.41■□□□□ 0.06
HMGN1-213ENST00000482192 NUP98P52948 1817 aa15.4■□□□□ 0.06
HMGN1-213ENST00000482192 NPR1P16066 1061 aa15.4■□□□□ 0.06
HMGN1-213ENST00000482192 AIMP1Q12904 312 aaKnown RBP15.4■□□□□ 0.06
HMGN1-213ENST00000482192 PARP10Q53GL7 1025 aa15.4■□□□□ 0.06
HMGN1-213ENST00000482192 HSP90AB3PQ58FF7 597 aa15.4■□□□□ 0.06
HMGN1-213ENST00000482192 GPBP1L1Q9HC44 474 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-213ENST00000482192 SENP3-EIF4A1A0A087X0R7 540 aa15.39■□□□□ 0.05
HMGN1-213ENST00000482192 SUSD4Q5VX71 490 aa15.39■□□□□ 0.05
HMGN1-213ENST00000482192 C9orf131Q5VYM1 1079 aa15.39■□□□□ 0.05
HMGN1-213ENST00000482192 PRPF40BQ6NWY9 871 aaKnown RBP15.39■□□□□ 0.05
HMGN1-213ENST00000482192 PPP1R42Q7Z4L9 355 aa15.39■□□□□ 0.05
HMGN1-213ENST00000482192 NUTM1Q86Y26 1132 aa15.39■□□□□ 0.05
HMGN1-213ENST00000482192 ZNF526Q8TF50 670 aaPredicted RBP15.39■□□□□ 0.05
HMGN1-213ENST00000482192 CHMP4AQ9BY43 222 aa15.39■□□□□ 0.05
HMGN1-213ENST00000482192 HYPKQ9NX55 129 aa15.39■□□□□ 0.05
HMGN1-213ENST00000482192 RIC1Q4ADV7 1423 aa15.39■□□□□ 0.05
HMGN1-213ENST00000482192 IL16Q14005 1332 aa15.39■□□□□ 0.05
HMGN1-213ENST00000482192 ABCC12Q96J65 1359 aa15.38■□□□□ 0.05
HMGN1-213ENST00000482192 ELL2O00472 640 aaPredicted RBP15.38■□□□□ 0.05
HMGN1-213ENST00000482192 C21orf2O43822 256 aa15.38■□□□□ 0.05
HMGN1-213ENST00000482192 ERFEQ4G0M1 354 aa15.38■□□□□ 0.05
HMGN1-213ENST00000482192 FAM9BQ8IZU0 186 aa15.38■□□□□ 0.05
HMGN1-213ENST00000482192 C8orf58Q8NAV2 365 aa15.38■□□□□ 0.05
HMGN1-213ENST00000482192 RNF181Q9P0P0 153 aa15.38■□□□□ 0.05
HMGN1-213ENST00000482192 NTSR2O95665 410 aa15.37■□□□□ 0.05
HMGN1-213ENST00000482192 RASSF7Q02833 373 aa15.37■□□□□ 0.05
HMGN1-213ENST00000482192 CRY2Q49AN0 593 aa15.37■□□□□ 0.05
HMGN1-213ENST00000482192 SOGA3Q5TF21 947 aa15.37■□□□□ 0.05
HMGN1-213ENST00000482192 PLBD2Q8NHP8 589 aa15.37■□□□□ 0.05
HMGN1-213ENST00000482192 TSR2Q969E8 191 aaKnown RBP15.37■□□□□ 0.05
HMGN1-213ENST00000482192 TNRC6CQ9HCJ0 1690 aaKnown RBP15.37■□□□□ 0.05
HMGN1-213ENST00000482192 RNF123Q5XPI4 1314 aa15.37■□□□□ 0.05
HMGN1-213ENST00000482192 LMNB1P20700 586 aa15.36■□□□□ 0.05
HMGN1-213ENST00000482192 TCIRG1Q13488 830 aa15.36■□□□□ 0.05
HMGN1-213ENST00000482192 ANKRD13DQ6ZTN6 518 aa15.36■□□□□ 0.05
HMGN1-213ENST00000482192 UTP14AQ9BVJ6 771 aaKnown RBP15.36■□□□□ 0.05
HMGN1-213ENST00000482192 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
HMGN1-213ENST00000482192 ARFGEF2Q9Y6D5 1785 aa15.36■□□□□ 0.05
HMGN1-213ENST00000482192 ANKRD36CQ5JPF3 1778 aa15.35■□□□□ 0.05
HMGN1-213ENST00000482192 NFKBIEO00221 500 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms