RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 CCDC30Q5VVM6 783 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 ERICH6BQ5W0A0 696 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 DIEXFQ68CQ4 756 aaKnown RBP3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 CC2D2BQ6DHV5 1058 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 NLGN1Q8N2Q7 840 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 NECTIN2Q92692 538 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 MTFR1LQ9H019 292 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 DDX21Q9NR30 783 aaKnown RBP eCLIP3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 ATG3Q9NT62 314 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 CCDC87Q9NVE4 849 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 TRIM35Q9UPQ4 493 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 LTBP3Q9NS15 1303 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 LOC102724428A0A0B4J2F2 783 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 SIK1P57059 783 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 GOLGA2Q08379 1002 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 TXNRD1Q16881 649 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 NUTM2GQ5VZR2 741 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 DBF4Q9UBU7 674 aaPredicted RBP3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 NARFQ9UHQ1 456 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 CD2APQ9Y5K6 639 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 ANKRD31Q8N7Z5 1873 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 MAST2Q6P0Q8 1798 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 KLRG2A4D1S0 409 aaPredicted RBP3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 U2SURPO15042 1029 aaKnown RBP3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 ALDH1L1O75891 902 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 RIPK4P57078 832 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 SLC15A2Q16348 729 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 IL17REQ8NFR9 667 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 PIGBQ92521 554 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 PLA2G12BQ9BX93 195 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 DACH1Q9UI36 760 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 UTYO14607 1347 aa3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 USP42Q9H9J4 1324 aaKnown RBP3.5□□□□□ -1.85
RAB3IP-206ENST00000481897 BTBD11A6QL63 1104 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 CYP19A1P11511 503 aaPredicted RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 EIF5P55010 431 aaKnown RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 TGFB2P61812 414 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 SLFN5Q08AF3 891 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 SLC10A5Q5PT55 438 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 CCNL1Q9UK58 526 aaPredicted RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 ADAMTS8Q9UP79 889 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 FER1L6Q2WGJ9 1857 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 GIGYF1O75420 1035 aaPredicted RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 MNX1P50219 401 aaPredicted RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 AEBP1Q8IUX7 1158 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 API5Q9BZZ5 524 aaKnown RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 RTCBQ9Y3I0 505 aaKnown RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 CHD4Q14839 1912 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 ABCC12Q96J65 1359 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 COL11A2P13942 1736 aaPredicted RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 IPO8O15397 1037 aaKnown RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 APBA3O96018 575 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 L3MBTL3Q96JM7 780 aaPredicted RBP3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 POLR3GLQ9BT43 218 aa3.49□□□□□ -1.85
RAB3IP-206ENST00000481897 MAP3K15Q6ZN16 1313 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 STYK1Q6J9G0 422 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 KIF6Q6ZMV9 814 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 LRP10Q7Z4F1 713 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 PLBD2Q8NHP8 589 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 TSPYL4Q9UJ04 414 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 FANCIQ9NVI1 1328 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 COL1A1P02452 1464 aaPredicted RBP3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 ECM29Q5VYK3 1845 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 POLD1P28340 1107 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 PRIM1P49642 420 aaKnown RBP3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 CCDC191Q8NCU4 936 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 PHACTR3Q96KR7 559 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 STK31Q9BXU1 1019 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 TIAM2Q8IVF5 1701 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 WDR90Q96KV7 1748 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 PDS5AQ29RF7 1337 aaKnown RBP3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 PNPLA7Q6ZV29 1317 aa3.48□□□□□ -1.85
RAB3IP-206ENST00000481897 SNED1Q8TER0 1413 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 KCNQ2O43526 872 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 NT5C2P49902 561 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 CCT4P50991 539 aaKnown RBP3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 PDE3AQ14432 1141 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 INTS5Q6P9B9 1019 aaKnown RBP3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 GIGYF2Q6Y7W6 1299 aaKnown RBP3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 IL27Q8NEV9 243 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 ANO8Q9HCE9 1232 aaPredicted RBP3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 ZNF646O15015 1829 aaPredicted RBP3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 SCN4AP35499 1836 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 PPM1GO15355 546 aaPredicted RBP3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 MAP4K4O95819 1239 aaPredicted RBP3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 TM4SF1P30408 202 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 HOXA10P31260 410 aaPredicted RBP3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 TRAPPC3LQ5T215 181 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 C15orf52Q6ZUT6 534 aaKnown RBP3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 PPP1R42Q7Z4L9 355 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 KIF12Q96FN5 646 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 LTV1Q96GA3 475 aaPredicted RBP3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 ISCA1Q9BUE6 129 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 SPON1Q9HCB6 807 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 ABCC4O15439 1325 aa3.47□□□□□ -1.85
RAB3IP-206ENST00000481897 EIF5BO60841 1220 aaKnown RBP3.46□□□□□ -1.85
RAB3IP-206ENST00000481897 HMOX1P09601 288 aa3.46□□□□□ -1.85
RAB3IP-206ENST00000481897 PDE6BP35913 854 aa3.46□□□□□ -1.85
RAB3IP-206ENST00000481897 ATP6V1AP38606 617 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms