RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 CCAR1Q8IX12 1150 aaKnown RBP13.48□□□□□ -0.25
DDX39B-219ENST00000481456 RUFY1Q96T51 708 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 SKILP12757 684 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 TIGD1Q96MW7 591 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 ABCA8O94911 1581 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 GADD45BO75293 160 aaPredicted RBP13.48□□□□□ -0.25
DDX39B-219ENST00000481456 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 ZNF397Q8NF99 534 aaPredicted RBP13.48□□□□□ -0.25
DDX39B-219ENST00000481456 PCMTD1Q96MG8 357 aaPredicted RBP13.48□□□□□ -0.25
DDX39B-219ENST00000481456 RIOK3O14730 519 aaKnown RBP13.47□□□□□ -0.25
DDX39B-219ENST00000481456 FSIP1Q8NA03 581 aa13.47□□□□□ -0.25
DDX39B-219ENST00000481456 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
DDX39B-219ENST00000481456 URI1O94763 535 aaPredicted RBP13.47□□□□□ -0.25
DDX39B-219ENST00000481456 VPS53Q5VIR6 699 aa13.47□□□□□ -0.25
DDX39B-219ENST00000481456 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
DDX39B-219ENST00000481456 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
DDX39B-219ENST00000481456 RAPGEF4Q8WZA2 1011 aa13.47□□□□□ -0.25
DDX39B-219ENST00000481456 DNAJC25Q9H1X3 360 aa13.47□□□□□ -0.25
DDX39B-219ENST00000481456 MYOM2P54296 1465 aa13.47□□□□□ -0.25
DDX39B-219ENST00000481456 LAMC1P11047 1609 aa13.47□□□□□ -0.25
DDX39B-219ENST00000481456 TTLL5Q6EMB2 1281 aa13.46□□□□□ -0.25
DDX39B-219ENST00000481456 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
DDX39B-219ENST00000481456 TMC6Q7Z403 805 aa13.46□□□□□ -0.25
DDX39B-219ENST00000481456 CCDC47Q96A33 483 aaKnown RBP13.46□□□□□ -0.25
DDX39B-219ENST00000481456 C17orf53Q8N3J3 647 aaPredicted RBP13.46□□□□□ -0.25
DDX39B-219ENST00000481456 CTNNA3Q9UI47 895 aa13.46□□□□□ -0.25
DDX39B-219ENST00000481456 CASQ1P31415 396 aa13.46□□□□□ -0.26
DDX39B-219ENST00000481456 KRT24Q2M2I5 525 aa13.46□□□□□ -0.26
DDX39B-219ENST00000481456 CAGE1Q8TC20 777 aa13.46□□□□□ -0.26
DDX39B-219ENST00000481456 AOX1Q06278 1338 aa13.46□□□□□ -0.26
DDX39B-219ENST00000481456 NPHP3Q7Z494 1330 aa13.46□□□□□ -0.26
DDX39B-219ENST00000481456 ATP7AQ04656 1500 aa13.46□□□□□ -0.26
DDX39B-219ENST00000481456 CCDC8Q9H0W5 538 aaPredicted RBP13.45□□□□□ -0.26
DDX39B-219ENST00000481456 IQGAP3Q86VI3 1631 aa13.45□□□□□ -0.26
DDX39B-219ENST00000481456 CDKL5O76039 1030 aa13.45□□□□□ -0.26
DDX39B-219ENST00000481456 SLU7O95391 586 aaKnown RBP13.45□□□□□ -0.26
DDX39B-219ENST00000481456 XBP1P17861 261 aa13.45□□□□□ -0.26
DDX39B-219ENST00000481456 RBM8AQ9Y5S9 174 aaKnown RBP13.45□□□□□ -0.26
DDX39B-219ENST00000481456 TTC41PQ6P2S7 1318 aa13.45□□□□□ -0.26
DDX39B-219ENST00000481456 EPB41L2O43491 1005 aaKnown RBP13.45□□□□□ -0.26
DDX39B-219ENST00000481456 LUZP1Q86V48 1076 aa13.45□□□□□ -0.26
DDX39B-219ENST00000481456 PREX2Q70Z35 1606 aa13.45□□□□□ -0.26
DDX39B-219ENST00000481456 TOP1P11387 765 aaKnown RBP13.44□□□□□ -0.26
DDX39B-219ENST00000481456 PIP4K2AP48426 406 aaPredicted RBP13.44□□□□□ -0.26
DDX39B-219ENST00000481456 SOS1Q07889 1333 aaPredicted RBP13.44□□□□□ -0.26
DDX39B-219ENST00000481456 EIF4A2Q14240 407 aaKnown RBP13.44□□□□□ -0.26
DDX39B-219ENST00000481456 TUBB4AP04350 444 aa13.44□□□□□ -0.26
DDX39B-219ENST00000481456 IL13P35225 146 aa13.44□□□□□ -0.26
DDX39B-219ENST00000481456 POLR3GO15318 223 aaPredicted RBP13.44□□□□□ -0.26
DDX39B-219ENST00000481456 CCDC158Q5M9N0 1113 aa13.44□□□□□ -0.26
DDX39B-219ENST00000481456 SSH2Q76I76 1423 aa13.44□□□□□ -0.26
DDX39B-219ENST00000481456 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
DDX39B-219ENST00000481456 GTF2F1P35269 517 aaKnown RBP eCLIP13.43□□□□□ -0.26
DDX39B-219ENST00000481456 BCL2L12Q9HB09 334 aa13.43□□□□□ -0.26
DDX39B-219ENST00000481456 BRMS1Q9HCU9 246 aa13.43□□□□□ -0.26
DDX39B-219ENST00000481456 CDC42BPAQ5VT25 1732 aa13.43□□□□□ -0.26
DDX39B-219ENST00000481456 TTC39AQ5SRH9 613 aa13.43□□□□□ -0.26
DDX39B-219ENST00000481456 NPATQ14207 1427 aa13.43□□□□□ -0.26
DDX39B-219ENST00000481456 U2AF2P26368 475 aaKnown RBP eCLIP13.43□□□□□ -0.265e-14■■■■□ 22.7
DDX39B-219ENST00000481456 RUFY3Q7L099 469 aa13.43□□□□□ -0.26
DDX39B-219ENST00000481456 MYO5CQ9NQX4 1742 aa13.43□□□□□ -0.26
DDX39B-219ENST00000481456 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.43□□□□□ -0.26
DDX39B-219ENST00000481456 SART3Q15020 963 aaKnown RBP13.43□□□□□ -0.26
DDX39B-219ENST00000481456 SLC3A2P08195 630 aaKnown RBP13.43□□□□□ -0.26
DDX39B-219ENST00000481456 GBP3Q9H0R5 595 aa13.43□□□□□ -0.26
DDX39B-219ENST00000481456 GABPB1Q06547 395 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-219ENST00000481456 C8orf76Q96K31 380 aa13.42□□□□□ -0.26
DDX39B-219ENST00000481456 DBF4Q9UBU7 674 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-219ENST00000481456 SNX14Q9Y5W7 946 aa13.42□□□□□ -0.26
DDX39B-219ENST00000481456 GOLGA6L9A6NEM1 432 aa13.42□□□□□ -0.26
DDX39B-219ENST00000481456 UNC13BO14795 1591 aa13.42□□□□□ -0.26
DDX39B-219ENST00000481456 FAM69CQ0P6D2 419 aa13.42□□□□□ -0.26
DDX39B-219ENST00000481456 GUCY1B3Q02153 619 aa13.42□□□□□ -0.26
DDX39B-219ENST00000481456 CLEC17AQ6ZS10 378 aa13.42□□□□□ -0.26
DDX39B-219ENST00000481456 CCDC69A6NI79 296 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 FBXO31Q5XUX0 539 aaPredicted RBP13.41□□□□□ -0.26
DDX39B-219ENST00000481456 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.41□□□□□ -0.263e-10■□□□□ 10.7
DDX39B-219ENST00000481456 YTHDC2Q9H6S0 1430 aaKnown RBP13.41□□□□□ -0.26
DDX39B-219ENST00000481456 PI4KAP2A4QPH2 592 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 G3V3G9 751 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 MYL6BP14649 208 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 HSPA4P34932 840 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 IMMTQ16891 758 aaKnown RBP13.41□□□□□ -0.26
DDX39B-219ENST00000481456 DCAF8Q5TAQ9 597 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 TXLNBQ8N3L3 684 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 PI4KAP1Q8N8J0 262 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 TBC1D2BQ9UPU7 963 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 RAD50Q92878 1312 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
DDX39B-219ENST00000481456 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
DDX39B-219ENST00000481456 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 IGSF3O75054 1194 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 ATP2B1P20020 1258 aa13.41□□□□□ -0.26
DDX39B-219ENST00000481456 CHL1O00533 1208 aa13.4□□□□□ -0.26
DDX39B-219ENST00000481456 RGS12O14924 1447 aa13.4□□□□□ -0.26
DDX39B-219ENST00000481456 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
DDX39B-219ENST00000481456 RTL1A6NKG5 1358 aa13.4□□□□□ -0.26
DDX39B-219ENST00000481456 CREB3L3Q68CJ9 461 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms