RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 CAMTA2O94983 1202 aa8.69□□□□□ -1.02
PRDM1-206ENST00000481163 CALD1Q05682 793 aaKnown RBP8.69□□□□□ -1.02
PRDM1-206ENST00000481163 HLFQ16534 295 aa8.69□□□□□ -1.02
PRDM1-206ENST00000481163 KIF6Q6ZMV9 814 aa8.69□□□□□ -1.02
PRDM1-206ENST00000481163 TTLL7Q6ZT98 887 aa8.69□□□□□ -1.02
PRDM1-206ENST00000481163 TSR2Q969E8 191 aaKnown RBP8.69□□□□□ -1.02
PRDM1-206ENST00000481163 SETDB2Q96T68 719 aa8.69□□□□□ -1.02
PRDM1-206ENST00000481163 TCERG1O14776 1098 aaKnown RBP8.68□□□□□ -1.02
PRDM1-206ENST00000481163 DPEP1P16444 411 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 YBX3P16989 372 aaKnown RBP eCLIP8.68□□□□□ -1.02
PRDM1-206ENST00000481163 GPTP24298 496 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 CHRNA5P30532 468 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 PROSER3Q2NL68 480 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 HDGFL1Q5TGJ6 251 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 DUSP27Q5VZP5 1158 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 WWC1Q8IX03 1113 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 BABAM1Q9NWV8 329 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 ZNF219Q9P2Y4 722 aaPredicted RBP8.68□□□□□ -1.02
PRDM1-206ENST00000481163 NIP7Q9Y221 180 aaKnown RBP eCLIP8.68□□□□□ -1.02
PRDM1-206ENST00000481163 BCS1LQ9Y276 419 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 SCN7AQ01118 1682 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 KIF13BQ9NQT8 1826 aa8.68□□□□□ -1.02
PRDM1-206ENST00000481163 YY1P25490 414 aa8.67□□□□□ -1.02
PRDM1-206ENST00000481163 GTF2E1P29083 439 aaPredicted RBP8.67□□□□□ -1.02
PRDM1-206ENST00000481163 COPS6Q7L5N1 327 aa8.67□□□□□ -1.02
PRDM1-206ENST00000481163 NBPF5PQ86XG9 351 aaPredicted RBP8.67□□□□□ -1.02
PRDM1-206ENST00000481163 MIER1Q8N108 512 aa8.67□□□□□ -1.02
PRDM1-206ENST00000481163 IFT57Q9NWB7 429 aa8.67□□□□□ -1.02
PRDM1-206ENST00000481163 CHPF2Q9P2E5 772 aa8.67□□□□□ -1.02
PRDM1-206ENST00000481163 ZNF652Q9Y2D9 606 aa8.67□□□□□ -1.02
PRDM1-206ENST00000481163 CCDC88AQ3V6T2 1871 aa8.66□□□□□ -1.02
PRDM1-206ENST00000481163 ZNF853P0CG23 659 aa8.66□□□□□ -1.02
PRDM1-206ENST00000481163 TGFB2P61812 414 aa8.66□□□□□ -1.02
PRDM1-206ENST00000481163 C2CD5Q86YS7 1000 aa8.66□□□□□ -1.02
PRDM1-206ENST00000481163 C8orf58Q8NAV2 365 aa8.66□□□□□ -1.02
PRDM1-206ENST00000481163 XAGE3Q8WTP9 111 aa8.66□□□□□ -1.02
PRDM1-206ENST00000481163 ZNF622Q969S3 477 aaKnown RBP eCLIP8.66□□□□□ -1.02
PRDM1-206ENST00000481163 ANKRD31Q8N7Z5 1873 aa8.66□□□□□ -1.02
PRDM1-206ENST00000481163 MAP3K15Q6ZN16 1313 aa8.65□□□□□ -1.02
PRDM1-206ENST00000481163 ST5P78524 1137 aa8.65□□□□□ -1.02
PRDM1-206ENST00000481163 PDIA6Q15084 440 aa8.65□□□□□ -1.02
PRDM1-206ENST00000481163 PRR5LQ6MZQ0 368 aa8.65□□□□□ -1.02
PRDM1-206ENST00000481163 ARHGAP27Q6ZUM4 889 aa8.65□□□□□ -1.02
PRDM1-206ENST00000481163 TSPYL6Q8N831 410 aa8.65□□□□□ -1.02
PRDM1-206ENST00000481163 CNBD1Q8NA66 436 aa8.65□□□□□ -1.02
PRDM1-206ENST00000481163 PIM2Q9P1W9 311 aa8.65□□□□□ -1.02
PRDM1-206ENST00000481163 KIAA1551Q9HCM1 1747 aa8.65□□□□□ -1.03
PRDM1-206ENST00000481163 PXDNLA1KZ92 1463 aa8.64□□□□□ -1.03
PRDM1-206ENST00000481163 C10orf71Q711Q0 1435 aa8.64□□□□□ -1.03
PRDM1-206ENST00000481163 BRCA1P38398 1863 aaKnown RBP8.64□□□□□ -1.03
PRDM1-206ENST00000481163 CARMIL3Q8ND23 1372 aa8.64□□□□□ -1.03
PRDM1-206ENST00000481163 NRXN2Q9P2S2 1712 aa8.64□□□□□ -1.03
PRDM1-206ENST00000481163 H0YIN7 160 aa8.64□□□□□ -1.03
PRDM1-206ENST00000481163 GRIN3BO60391 1043 aa8.64□□□□□ -1.03
PRDM1-206ENST00000481163 CLEC4GQ6UXB4 293 aa8.64□□□□□ -1.03
PRDM1-206ENST00000481163 TPTE2Q6XPS3 522 aa8.64□□□□□ -1.03
PRDM1-206ENST00000481163 NUTM1Q86Y26 1132 aa8.64□□□□□ -1.03
PRDM1-206ENST00000481163 PHAXQ9H814 394 aaKnown RBP8.64□□□□□ -1.03
PRDM1-206ENST00000481163 DDX21Q9NR30 783 aaKnown RBP eCLIP8.64□□□□□ -1.03
PRDM1-206ENST00000481163 ERVV-1B6SEH8 477 aa8.63□□□□□ -1.03
PRDM1-206ENST00000481163 KCNA3P22001 575 aa8.63□□□□□ -1.03
PRDM1-206ENST00000481163 PDE6BP35913 854 aa8.63□□□□□ -1.03
PRDM1-206ENST00000481163 CCDC27Q2M243 656 aa8.63□□□□□ -1.03
PRDM1-206ENST00000481163 TWISTNBQ3B726 338 aaPredicted RBP8.63□□□□□ -1.03
PRDM1-206ENST00000481163 DALRD3Q5D0E6 543 aaKnown RBP8.63□□□□□ -1.03
PRDM1-206ENST00000481163 RTL5Q5HYW3 569 aaPredicted RBP8.63□□□□□ -1.03
PRDM1-206ENST00000481163 GIGYF2Q6Y7W6 1299 aaKnown RBP8.63□□□□□ -1.03
PRDM1-206ENST00000481163 RIC3Q7Z5B4 369 aa8.63□□□□□ -1.03
PRDM1-206ENST00000481163 WDR63Q8IWG1 891 aa8.63□□□□□ -1.03
PRDM1-206ENST00000481163 CNKSR2Q8WXI2 1034 aa8.63□□□□□ -1.03
PRDM1-206ENST00000481163 SPINK5Q9NQ38 1064 aaPredicted RBP8.63□□□□□ -1.03
PRDM1-206ENST00000481163 DBF4Q9UBU7 674 aaPredicted RBP8.63□□□□□ -1.03
PRDM1-206ENST00000481163 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
PRDM1-206ENST00000481163 ERBB4Q15303 1308 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 ARFGEF1Q9Y6D6 1849 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 ATP5J2-PTCD1G3V325 749 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 CCER2I3L3R5 266 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 EXOSC9Q06265 439 aaKnown RBP8.62□□□□□ -1.03
PRDM1-206ENST00000481163 GOLGA2Q08379 1002 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 ERFEQ4G0M1 354 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 CCDC30Q5VVM6 783 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 SUSD4Q5VX71 490 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 ANKRD13DQ6ZTN6 518 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 STK31Q9BXU1 1019 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 HYPKQ9NX55 129 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 TAF1P21675 1872 aa8.62□□□□□ -1.03
PRDM1-206ENST00000481163 SLX4Q8IY92 1834 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 ARFGEF2Q9Y6D5 1785 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 UBN2Q6ZU65 1347 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 FANCIQ9NVI1 1328 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 CACNA1FO60840 1977 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 COL11A2P13942 1736 aaPredicted RBP8.61□□□□□ -1.03
PRDM1-206ENST00000481163 HOXB7P09629 217 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 LRP10Q7Z4F1 713 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 PPP1R42Q7Z4L9 355 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 TTLL6Q8N841 843 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 ZNF526Q8TF50 670 aaPredicted RBP8.61□□□□□ -1.03
PRDM1-206ENST00000481163 BRIP1Q9BX63 1249 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 NYXQ9GZU5 481 aa8.61□□□□□ -1.03
PRDM1-206ENST00000481163 MYH16Q9H6N6 1097 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms