RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SBF1O95248 1867 aa22.22■■□□□ 1.15
HSPG2-209ENST00000480900 ERVV-1B6SEH8 477 aa22.21■■□□□ 1.15
HSPG2-209ENST00000480900 LAS1LQ9Y4W2 734 aaKnown RBP22.21■■□□□ 1.15
HSPG2-209ENST00000480900 H0YIN7 160 aa22.2■■□□□ 1.14
HSPG2-209ENST00000480900 MYL6BP14649 208 aa22.2■■□□□ 1.14
HSPG2-209ENST00000480900 PDE6BP35913 854 aa22.2■■□□□ 1.14
HSPG2-209ENST00000480900 KIF6Q6ZMV9 814 aa22.2■■□□□ 1.14
HSPG2-209ENST00000480900 C2CD5Q86YS7 1000 aa22.2■■□□□ 1.14
HSPG2-209ENST00000480900 NGEFQ8N5V2 710 aa22.2■■□□□ 1.14
HSPG2-209ENST00000480900 CFAP44Q96MT7 982 aa22.2■■□□□ 1.14
HSPG2-209ENST00000480900 MAP3K15Q6ZN16 1313 aa22.2■■□□□ 1.14
HSPG2-209ENST00000480900 NPHP1O15259 732 aa22.19■■□□□ 1.14
HSPG2-209ENST00000480900 ST5P78524 1137 aa22.19■■□□□ 1.14
HSPG2-209ENST00000480900 HLFQ16534 295 aa22.19■■□□□ 1.14
HSPG2-209ENST00000480900 ARHGAP27Q6ZUM4 889 aa22.19■■□□□ 1.14
HSPG2-209ENST00000480900 NBPF5PQ86XG9 351 aaPredicted RBP22.19■■□□□ 1.14
HSPG2-209ENST00000480900 NIP7Q9Y221 180 aaKnown RBP eCLIP22.19■■□□□ 1.14
HSPG2-209ENST00000480900 ATP10DQ9P241 1426 aa22.19■■□□□ 1.14
HSPG2-209ENST00000480900 ARFGEF2Q9Y6D5 1785 aa22.19■■□□□ 1.14
HSPG2-209ENST00000480900 CACNA1SQ13698 1873 aa22.19■■□□□ 1.14
HSPG2-209ENST00000480900 EIF2S2P20042 333 aaKnown RBP22.18■■□□□ 1.14
HSPG2-209ENST00000480900 CALD1Q05682 793 aaKnown RBP22.18■■□□□ 1.14
HSPG2-209ENST00000480900 TTLL7Q6ZT98 887 aa22.18■■□□□ 1.14
HSPG2-209ENST00000480900 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
HSPG2-209ENST00000480900 HOXB7P09629 217 aa22.17■■□□□ 1.14
HSPG2-209ENST00000480900 PDIA6Q15084 440 aa22.17■■□□□ 1.14
HSPG2-209ENST00000480900 LRP10Q7Z4F1 713 aa22.17■■□□□ 1.14
HSPG2-209ENST00000480900 TTLL6Q8N841 843 aa22.17■■□□□ 1.14
HSPG2-209ENST00000480900 ZNF853P0CG23 659 aa22.16■■□□□ 1.14
HSPG2-209ENST00000480900 CCDC24Q8N4L8 307 aa22.16■■□□□ 1.14
HSPG2-209ENST00000480900 ANKRD36CQ5JPF3 1778 aa22.16■■□□□ 1.14
HSPG2-209ENST00000480900 CCDC88AQ3V6T2 1871 aa22.15■■□□□ 1.14
HSPG2-209ENST00000480900 KRT24Q2M2I5 525 aa22.15■■□□□ 1.14
HSPG2-209ENST00000480900 TPTE2Q6XPS3 522 aa22.15■■□□□ 1.14
HSPG2-209ENST00000480900 MBIPQ9NS73 344 aa22.15■■□□□ 1.14
HSPG2-209ENST00000480900 IFT57Q9NWB7 429 aa22.15■■□□□ 1.14
HSPG2-209ENST00000480900 GNAI1P63096 354 aa22.14■■□□□ 1.13
HSPG2-209ENST00000480900 PROSER3Q2NL68 480 aa22.14■■□□□ 1.13
HSPG2-209ENST00000480900 ZBTB3Q9H5J0 574 aa22.14■■□□□ 1.13
HSPG2-209ENST00000480900 SLX4Q8IY92 1834 aa22.14■■□□□ 1.13
HSPG2-209ENST00000480900 FER1L6Q2WGJ9 1857 aa22.13■■□□□ 1.13
HSPG2-209ENST00000480900 IBTKQ9P2D0 1353 aaPredicted RBP22.12■■□□□ 1.13
HSPG2-209ENST00000480900 ANXA1P04083 346 aa22.12■■□□□ 1.13
HSPG2-209ENST00000480900 GIGYF2Q6Y7W6 1299 aaKnown RBP22.12■■□□□ 1.13
HSPG2-209ENST00000480900 NECTIN2Q92692 538 aa22.12■■□□□ 1.13
HSPG2-209ENST00000480900 ZNF622Q969S3 477 aaKnown RBP eCLIP22.12■■□□□ 1.13
HSPG2-209ENST00000480900 NYXQ9GZU5 481 aa22.12■■□□□ 1.13
HSPG2-209ENST00000480900 DDX21Q9NR30 783 aaKnown RBP eCLIP22.12■■□□□ 1.13
HSPG2-209ENST00000480900 SRGNP10124 158 aa22.11■■□□□ 1.13
HSPG2-209ENST00000480900 HDGFL1Q5TGJ6 251 aa22.11■■□□□ 1.13
HSPG2-209ENST00000480900 STYK1Q6J9G0 422 aa22.11■■□□□ 1.13
HSPG2-209ENST00000480900 KLRG2A4D1S0 409 aaPredicted RBP22.1■■□□□ 1.13
HSPG2-209ENST00000480900 CCDC27Q2M243 656 aa22.1■■□□□ 1.13
HSPG2-209ENST00000480900 DUSP27Q5VZP5 1158 aa22.1■■□□□ 1.13
HSPG2-209ENST00000480900 ZNF34Q8IZ26 560 aa22.1■■□□□ 1.13
HSPG2-209ENST00000480900 CNKSR1Q969H4 720 aa22.1■■□□□ 1.13
HSPG2-209ENST00000480900 TNRC6CQ9HCJ0 1690 aaKnown RBP22.1■■□□□ 1.13
HSPG2-209ENST00000480900 FAM177BA6PVY3 158 aa22.09■■□□□ 1.13
HSPG2-209ENST00000480900 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
HSPG2-209ENST00000480900 MASTLQ96GX5 879 aa22.09■■□□□ 1.13
HSPG2-209ENST00000480900 GPBP1L1Q9HC44 474 aaPredicted RBP22.09■■□□□ 1.13
HSPG2-209ENST00000480900 DICER1Q9UPY3 1922 aaKnown RBP22.09■■□□□ 1.13
HSPG2-209ENST00000480900 UBN2Q6ZU65 1347 aa22.08■■□□□ 1.13
HSPG2-209ENST00000480900 RIC1Q4ADV7 1423 aa22.08■■□□□ 1.13
HSPG2-209ENST00000480900 GPTP24298 496 aa22.08■■□□□ 1.13
HSPG2-209ENST00000480900 GTF2E1P29083 439 aaPredicted RBP22.08■■□□□ 1.13
HSPG2-209ENST00000480900 C9orf131Q5VYM1 1079 aa22.08■■□□□ 1.13
HSPG2-209ENST00000480900 COPS6Q7L5N1 327 aa22.08■■□□□ 1.13
HSPG2-209ENST00000480900 XAGE3Q8WTP9 111 aa22.08■■□□□ 1.13
HSPG2-209ENST00000480900 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
HSPG2-209ENST00000480900 PARP10Q53GL7 1025 aa22.07■■□□□ 1.12
HSPG2-209ENST00000480900 DBF4Q9UBU7 674 aaPredicted RBP22.07■■□□□ 1.12
HSPG2-209ENST00000480900 ABCC12Q96J65 1359 aa22.07■■□□□ 1.12
HSPG2-209ENST00000480900 NPR1P16066 1061 aa22.06■■□□□ 1.12
HSPG2-209ENST00000480900 RASSF7Q02833 373 aa22.05■■□□□ 1.12
HSPG2-209ENST00000480900 AIMP1Q12904 312 aaKnown RBP22.05■■□□□ 1.12
HSPG2-209ENST00000480900 HSP90AB3PQ58FF7 597 aa22.05■■□□□ 1.12
HSPG2-209ENST00000480900 PRPF40BQ6NWY9 871 aaKnown RBP22.05■■□□□ 1.12
HSPG2-209ENST00000480900 WWC1Q8IX03 1113 aa22.05■■□□□ 1.12
HSPG2-209ENST00000480900 ZNF526Q8TF50 670 aaPredicted RBP22.05■■□□□ 1.12
HSPG2-209ENST00000480900 RNF181Q9P0P0 153 aa22.05■■□□□ 1.12
HSPG2-209ENST00000480900 TIAM2Q8IVF5 1701 aa22.05■■□□□ 1.12
HSPG2-209ENST00000480900 SUSD4Q5VX71 490 aa22.04■■□□□ 1.12
HSPG2-209ENST00000480900 PPP1R42Q7Z4L9 355 aa22.04■■□□□ 1.12
HSPG2-209ENST00000480900 NUTM1Q86Y26 1132 aa22.04■■□□□ 1.12
HSPG2-209ENST00000480900 HYPKQ9NX55 129 aa22.04■■□□□ 1.12
HSPG2-209ENST00000480900 C21orf2O43822 256 aa22.03■■□□□ 1.12
HSPG2-209ENST00000480900 NTSR2O95665 410 aa22.03■■□□□ 1.12
HSPG2-209ENST00000480900 CRY2Q49AN0 593 aa22.03■■□□□ 1.12
HSPG2-209ENST00000480900 ERFEQ4G0M1 354 aa22.03■■□□□ 1.12
HSPG2-209ENST00000480900 CACNA1FO60840 1977 aa22.03■■□□□ 1.12
HSPG2-209ENST00000480900 IL16Q14005 1332 aa22.03■■□□□ 1.12
HSPG2-209ENST00000480900 NFKBIEO00221 500 aa22.02■■□□□ 1.12
HSPG2-209ENST00000480900 LMNB1P20700 586 aa22.02■■□□□ 1.12
HSPG2-209ENST00000480900 C1QTNF8P60827 252 aa22.02■■□□□ 1.12
HSPG2-209ENST00000480900 SOGA3Q5TF21 947 aa22.02■■□□□ 1.12
HSPG2-209ENST00000480900 CHMP4AQ9BY43 222 aa22.02■■□□□ 1.12
HSPG2-209ENST00000480900 RNF123Q5XPI4 1314 aa22.02■■□□□ 1.12
HSPG2-209ENST00000480900 ZC3H4Q9UPT8 1303 aaKnown RBP22.02■■□□□ 1.12
HSPG2-209ENST00000480900 LAMB2P55268 1798 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms