RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 HSP90AB1P08238 724 aaKnown RBP16.75■□□□□ 0.27
USP11-208ENST00000480104 CCDC93Q567U6 631 aa16.75■□□□□ 0.27
USP11-208ENST00000480104 PRR5LQ6MZQ0 368 aa16.75■□□□□ 0.27
USP11-208ENST00000480104 GPC2Q8N158 579 aa16.75■□□□□ 0.27
USP11-208ENST00000480104 FZD9O00144 591 aa16.74■□□□□ 0.27
USP11-208ENST00000480104 FKBP4Q02790 459 aaKnown RBP eCLIP16.74■□□□□ 0.27
USP11-208ENST00000480104 STYK1Q6J9G0 422 aa16.74■□□□□ 0.27
USP11-208ENST00000480104 HHIPL1Q96JK4 782 aa16.74■□□□□ 0.27
USP11-208ENST00000480104 PPM1GO15355 546 aaPredicted RBP16.73■□□□□ 0.27
USP11-208ENST00000480104 CELF2O95319 508 aaKnown RBP16.73■□□□□ 0.27
USP11-208ENST00000480104 C7orf43Q8WVR3 580 aa16.73■□□□□ 0.27
USP11-208ENST00000480104 ZBTB1Q9Y2K1 713 aa16.73■□□□□ 0.27
USP11-208ENST00000480104 SRGNP10124 158 aa16.72■□□□□ 0.27
USP11-208ENST00000480104 NOGQ13253 232 aa16.72■□□□□ 0.27
USP11-208ENST00000480104 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
USP11-208ENST00000480104 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
USP11-208ENST00000480104 CYP19A1P11511 503 aaPredicted RBP16.71■□□□□ 0.27
USP11-208ENST00000480104 LMOD1P29536 600 aaPredicted RBP16.71■□□□□ 0.27
USP11-208ENST00000480104 EPS15P42566 896 aa16.71■□□□□ 0.27
USP11-208ENST00000480104 TBC1D9BQ66K14 1250 aa16.71■□□□□ 0.27
USP11-208ENST00000480104 CTU1Q7Z7A3 348 aaKnown RBP16.71■□□□□ 0.27
USP11-208ENST00000480104 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
USP11-208ENST00000480104 GJA3Q9Y6H8 435 aa16.71■□□□□ 0.27
USP11-208ENST00000480104 ZNF530Q6P9A1 599 aaPredicted RBP16.7■□□□□ 0.26
USP11-208ENST00000480104 OLFM4Q6UX06 510 aa16.7■□□□□ 0.26
USP11-208ENST00000480104 MASTLQ96GX5 879 aa16.7■□□□□ 0.26
USP11-208ENST00000480104 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
USP11-208ENST00000480104 SCNN1DP51172 638 aa16.69■□□□□ 0.26
USP11-208ENST00000480104 SAGE1Q9NXZ1 904 aa16.69■□□□□ 0.26
USP11-208ENST00000480104 COL6A3P12111 3177 aa16.69■□□□□ 0.26
USP11-208ENST00000480104 WASHC2AQ641Q2 1341 aa16.69■□□□□ 0.26
USP11-208ENST00000480104 TRIOBPQ9H2D6 2365 aa16.69■□□□□ 0.26
USP11-208ENST00000480104 ANKRD26Q9UPS8 1709 aa16.68■□□□□ 0.26
USP11-208ENST00000480104 IARSP41252 1262 aaKnown RBP16.68■□□□□ 0.26
USP11-208ENST00000480104 CARD11Q9BXL7 1154 aa16.68■□□□□ 0.26
USP11-208ENST00000480104 ST20-MTHFSA0A0A6YYL1 179 aa16.67■□□□□ 0.26
USP11-208ENST00000480104 MTHFSP49914 203 aa16.67■□□□□ 0.26
USP11-208ENST00000480104 USP50Q70EL3 339 aaPredicted RBP16.67■□□□□ 0.26
USP11-208ENST00000480104 CNBD1Q8NA66 436 aa16.67■□□□□ 0.26
USP11-208ENST00000480104 HTTP42858 3142 aa16.67■□□□□ 0.26
USP11-208ENST00000480104 GLIS2Q9BZE0 524 aaPredicted RBP16.66■□□□□ 0.26
USP11-208ENST00000480104 ZNF408Q9H9D4 720 aa16.66■□□□□ 0.26
USP11-208ENST00000480104 BCORQ6W2J9 1755 aa16.65■□□□□ 0.26
USP11-208ENST00000480104 TRPA1O75762 1119 aa16.65■□□□□ 0.26
USP11-208ENST00000480104 AKAP4Q5JQC9 854 aa16.65■□□□□ 0.26
USP11-208ENST00000480104 KIF20BQ96Q89 1820 aa16.65■□□□□ 0.26
USP11-208ENST00000480104 RANBP2P49792 3224 aaKnown RBP16.65■□□□□ 0.26
USP11-208ENST00000480104 COL4A5P29400 1685 aa16.65■□□□□ 0.26
USP11-208ENST00000480104 NPHP1O15259 732 aa16.64■□□□□ 0.25
USP11-208ENST00000480104 EIF6P56537 245 aaKnown RBP16.64■□□□□ 0.25
USP11-208ENST00000480104 PLEKHO1Q53GL0 409 aaPredicted RBP16.64■□□□□ 0.25
USP11-208ENST00000480104 RTKN2Q8IZC4 609 aa16.64■□□□□ 0.25
USP11-208ENST00000480104 RNF186Q9NXI6 227 aa16.64■□□□□ 0.25
USP11-208ENST00000480104 CANXP27824 592 aaKnown RBP16.63■□□□□ 0.25
USP11-208ENST00000480104 ST5P78524 1137 aa16.63■□□□□ 0.25
USP11-208ENST00000480104 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
USP11-208ENST00000480104 JDP2Q8WYK2 163 aa16.63■□□□□ 0.25
USP11-208ENST00000480104 CEP290O15078 2479 aa16.63■□□□□ 0.25
USP11-208ENST00000480104 HUNKP57058 714 aa16.62■□□□□ 0.25
USP11-208ENST00000480104 EIF4A2Q14240 407 aaKnown RBP16.62■□□□□ 0.25
USP11-208ENST00000480104 SLC17A8Q8NDX2 589 aa16.62■□□□□ 0.25
USP11-208ENST00000480104 BRCA2P51587 3418 aa16.62■□□□□ 0.25
USP11-208ENST00000480104 SCN7AQ01118 1682 aa16.62■□□□□ 0.25
USP11-208ENST00000480104 CENPFP49454 3210 aa16.61■□□□□ 0.25
USP11-208ENST00000480104 FAM155AB1AL88 458 aaPredicted RBP16.61■□□□□ 0.25
USP11-208ENST00000480104 C1orf141Q5JVX7 400 aa16.61■□□□□ 0.25
USP11-208ENST00000480104 TESK2Q96S53 571 aa16.61■□□□□ 0.25
USP11-208ENST00000480104 SCN11AQ9UI33 1791 aa16.61■□□□□ 0.25
USP11-208ENST00000480104 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
USP11-208ENST00000480104 KIF23Q02241 960 aaPredicted RBP16.6■□□□□ 0.25
USP11-208ENST00000480104 ADARB2Q9NS39 739 aaKnown RBP16.6■□□□□ 0.25
USP11-208ENST00000480104 A0A087WZG4 1122 aa16.59■□□□□ 0.25
USP11-208ENST00000480104 NPR1P16066 1061 aa16.59■□□□□ 0.25
USP11-208ENST00000480104 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
USP11-208ENST00000480104 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.24
USP11-208ENST00000480104 AMOTQ4VCS5 1084 aa16.58■□□□□ 0.24
USP11-208ENST00000480104 SETDB2Q96T68 719 aa16.58■□□□□ 0.24
USP11-208ENST00000480104 SNED1Q8TER0 1413 aa16.58■□□□□ 0.24
USP11-208ENST00000480104 PSMD1Q99460 953 aa16.57■□□□□ 0.24
USP11-208ENST00000480104 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
USP11-208ENST00000480104 COLQQ9Y215 455 aaPredicted RBP16.57■□□□□ 0.24
USP11-208ENST00000480104 RGMBQ6NW40 437 aa16.56■□□□□ 0.24
USP11-208ENST00000480104 GPRC5DQ9NZD1 345 aa16.56■□□□□ 0.24
USP11-208ENST00000480104 POLKQ9UBT6 870 aa16.56■□□□□ 0.24
USP11-208ENST00000480104 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
USP11-208ENST00000480104 ZNF330Q9Y3S2 320 aaPredicted RBP16.55■□□□□ 0.24
USP11-208ENST00000480104 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
USP11-208ENST00000480104 PGAP2Q9UHJ9 254 aa16.54■□□□□ 0.24
USP11-208ENST00000480104 DLK2Q6UY11 383 aa16.53■□□□□ 0.24
USP11-208ENST00000480104 CDC37L1Q7L3B6 337 aa16.53■□□□□ 0.24
USP11-208ENST00000480104 LARGE2Q8N3Y3 721 aa16.53■□□□□ 0.24
USP11-208ENST00000480104 CSRNP1Q96S65 589 aa16.53■□□□□ 0.24
USP11-208ENST00000480104 HDAC9Q9UKV0 1011 aa16.53■□□□□ 0.24
USP11-208ENST00000480104 KLRG2A4D1S0 409 aaPredicted RBP16.52■□□□□ 0.24
USP11-208ENST00000480104 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
USP11-208ENST00000480104 NBPF5PQ86XG9 351 aaPredicted RBP16.52■□□□□ 0.24
USP11-208ENST00000480104 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.24
USP11-208ENST00000480104 VSIG10Q8N0Z9 540 aa16.52■□□□□ 0.24
USP11-208ENST00000480104 CCDC102AQ96A19 550 aa16.52■□□□□ 0.24
USP11-208ENST00000480104 MRC1P22897 1456 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms