RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 BABAM1Q9NWV8 329 aa26.82■■□□□ 1.88
TRIM8-203ENST00000479004 ADAMTS8Q9UP79 889 aa26.81■■□□□ 1.88
TRIM8-203ENST00000479004 RRP7AQ9Y3A4 280 aaKnown RBP26.81■■□□□ 1.88
TRIM8-203ENST00000479004 COL11A2P13942 1736 aaPredicted RBP26.81■■□□□ 1.88
TRIM8-203ENST00000479004 ST5P78524 1137 aa26.8■■□□□ 1.88
TRIM8-203ENST00000479004 NPHP1O15259 732 aa26.79■■□□□ 1.88
TRIM8-203ENST00000479004 HLFQ16534 295 aa26.79■■□□□ 1.88
TRIM8-203ENST00000479004 ZNF622Q969S3 477 aaKnown RBP eCLIP26.79■■□□□ 1.88
TRIM8-203ENST00000479004 SENP3-EIF4A1A0A087X0R7 540 aa26.78■■□□□ 1.88
TRIM8-203ENST00000479004 NEUROD2Q15784 382 aa26.78■■□□□ 1.88
TRIM8-203ENST00000479004 NBPF5PQ86XG9 351 aaPredicted RBP26.78■■□□□ 1.88
TRIM8-203ENST00000479004 NGEFQ8N5V2 710 aa26.78■■□□□ 1.88
TRIM8-203ENST00000479004 NIP7Q9Y221 180 aaKnown RBP eCLIP26.78■■□□□ 1.88
TRIM8-203ENST00000479004 KIF3CO14782 793 aa26.77■■□□□ 1.88
TRIM8-203ENST00000479004 RNF181Q9P0P0 153 aa26.77■■□□□ 1.88
TRIM8-203ENST00000479004 ERBB4Q15303 1308 aa26.76■■□□□ 1.87
TRIM8-203ENST00000479004 ERVV-1B6SEH8 477 aa26.76■■□□□ 1.87
TRIM8-203ENST00000479004 MYL6BP14649 208 aa26.76■■□□□ 1.87
TRIM8-203ENST00000479004 TRIM35Q9UPQ4 493 aa26.76■■□□□ 1.87
TRIM8-203ENST00000479004 NUP98P52948 1817 aa26.76■■□□□ 1.87
TRIM8-203ENST00000479004 RASSF7Q02833 373 aa26.75■■□□□ 1.87
TRIM8-203ENST00000479004 TPTE2Q6XPS3 522 aa26.75■■□□□ 1.87
TRIM8-203ENST00000479004 MAP3K15Q6ZN16 1313 aa26.74■■□□□ 1.87
TRIM8-203ENST00000479004 SRGNP10124 158 aa26.74■■□□□ 1.87
TRIM8-203ENST00000479004 STYK1Q6J9G0 422 aa26.74■■□□□ 1.87
TRIM8-203ENST00000479004 TTLL7Q6ZT98 887 aa26.74■■□□□ 1.87
TRIM8-203ENST00000479004 CCDC88AQ3V6T2 1871 aa26.72■■□□□ 1.87
TRIM8-203ENST00000479004 PRELPP51888 382 aa26.72■■□□□ 1.87
TRIM8-203ENST00000479004 KIF6Q6ZMV9 814 aa26.72■■□□□ 1.87
TRIM8-203ENST00000479004 CNKSR1Q969H4 720 aa26.72■■□□□ 1.87
TRIM8-203ENST00000479004 MASTLQ96GX5 879 aa26.72■■□□□ 1.87
TRIM8-203ENST00000479004 CACNA1SQ13698 1873 aa26.72■■□□□ 1.87
TRIM8-203ENST00000479004 NFKBIEO00221 500 aa26.71■■□□□ 1.87
TRIM8-203ENST00000479004 CHL1O00533 1208 aa26.71■■□□□ 1.87
TRIM8-203ENST00000479004 C21orf2O43822 256 aa26.71■■□□□ 1.87
TRIM8-203ENST00000479004 LMNB1P20700 586 aa26.71■■□□□ 1.87
TRIM8-203ENST00000479004 SLX4Q8IY92 1834 aa26.71■■□□□ 1.87
TRIM8-203ENST00000479004 ARFGEF2Q9Y6D5 1785 aa26.71■■□□□ 1.87
TRIM8-203ENST00000479004 KLRG2A4D1S0 409 aaPredicted RBP26.7■■□□□ 1.86
TRIM8-203ENST00000479004 FAM177BA6PVY3 158 aa26.7■■□□□ 1.86
TRIM8-203ENST00000479004 EIF2S2P20042 333 aaKnown RBP26.7■■□□□ 1.86
TRIM8-203ENST00000479004 PDIA6Q15084 440 aa26.7■■□□□ 1.86
TRIM8-203ENST00000479004 LRP10Q7Z4F1 713 aa26.7■■□□□ 1.86
TRIM8-203ENST00000479004 FER1L6Q2WGJ9 1857 aa26.7■■□□□ 1.86
TRIM8-203ENST00000479004 NMRK2Q9NPI5 230 aa26.69■■□□□ 1.86
TRIM8-203ENST00000479004 ZC3H4Q9UPT8 1303 aaKnown RBP26.68■■□□□ 1.86
TRIM8-203ENST00000479004 ZBTB3Q9H5J0 574 aa26.68■■□□□ 1.86
TRIM8-203ENST00000479004 ZNF219Q9P2Y4 722 aaPredicted RBP26.68■■□□□ 1.86
TRIM8-203ENST00000479004 PRPF40BQ6NWY9 871 aaKnown RBP26.67■■□□□ 1.86
TRIM8-203ENST00000479004 NYXQ9GZU5 481 aa26.67■■□□□ 1.86
TRIM8-203ENST00000479004 LAS1LQ9Y4W2 734 aaKnown RBP26.67■■□□□ 1.86
TRIM8-203ENST00000479004 KDM2BQ8NHM5 1336 aa26.66■■□□□ 1.86
TRIM8-203ENST00000479004 NPR1P16066 1061 aa26.66■■□□□ 1.86
TRIM8-203ENST00000479004 GTF2E1P29083 439 aaPredicted RBP26.65■■□□□ 1.86
TRIM8-203ENST00000479004 PROSER3Q2NL68 480 aa26.65■■□□□ 1.86
TRIM8-203ENST00000479004 GIGYF2Q6Y7W6 1299 aaKnown RBP26.65■■□□□ 1.86
TRIM8-203ENST00000479004 CEP350Q5VT06 3117 aa26.64■■□□□ 1.86
TRIM8-203ENST00000479004 TOMM70O94826 608 aa26.64■■□□□ 1.86
TRIM8-203ENST00000479004 KRT24Q2M2I5 525 aa26.64■■□□□ 1.86
TRIM8-203ENST00000479004 ZNF34Q8IZ26 560 aa26.64■■□□□ 1.86
TRIM8-203ENST00000479004 UBN2Q6ZU65 1347 aa26.64■■□□□ 1.85
TRIM8-203ENST00000479004 DICER1Q9UPY3 1922 aaKnown RBP26.63■■□□□ 1.85
TRIM8-203ENST00000479004 TIAM2Q8IVF5 1701 aa26.63■■□□□ 1.85
TRIM8-203ENST00000479004 ANXA1P04083 346 aa26.63■■□□□ 1.85
TRIM8-203ENST00000479004 GPTP24298 496 aa26.63■■□□□ 1.85
TRIM8-203ENST00000479004 C7orf43Q8WVR3 580 aa26.63■■□□□ 1.85
TRIM8-203ENST00000479004 IBTKQ9P2D0 1353 aaPredicted RBP26.62■■□□□ 1.85
TRIM8-203ENST00000479004 APAF1O14727 1248 aa26.62■■□□□ 1.85
TRIM8-203ENST00000479004 SOGA3Q5TF21 947 aa26.62■■□□□ 1.85
TRIM8-203ENST00000479004 SUSD4Q5VX71 490 aa26.62■■□□□ 1.85
TRIM8-203ENST00000479004 NUTM1Q86Y26 1132 aa26.62■■□□□ 1.85
TRIM8-203ENST00000479004 NECTIN2Q92692 538 aa26.62■■□□□ 1.85
TRIM8-203ENST00000479004 CFAP44Q96MT7 982 aa26.62■■□□□ 1.85
TRIM8-203ENST00000479004 TNRC6CQ9HCJ0 1690 aaKnown RBP26.62■■□□□ 1.85
TRIM8-203ENST00000479004 LTBP3Q9NS15 1303 aa26.62■■□□□ 1.85
TRIM8-203ENST00000479004 ABCC12Q96J65 1359 aa26.61■■□□□ 1.85
TRIM8-203ENST00000479004 HSPA6P17066 643 aa26.61■■□□□ 1.85
TRIM8-203ENST00000479004 ERFEQ4G0M1 354 aa26.61■■□□□ 1.85
TRIM8-203ENST00000479004 RRAGCQ9HB90 399 aa26.61■■□□□ 1.85
TRIM8-203ENST00000479004 ANP32CO43423 234 aa26.6■■□□□ 1.85
TRIM8-203ENST00000479004 TAOK3Q9H2K8 898 aa26.6■■□□□ 1.85
TRIM8-203ENST00000479004 DDX21Q9NR30 783 aaKnown RBP eCLIP26.6■■□□□ 1.85
TRIM8-203ENST00000479004 GLTPD2A6NH11 291 aa26.59■■□□□ 1.85
TRIM8-203ENST00000479004 CRY2Q49AN0 593 aa26.59■■□□□ 1.85
TRIM8-203ENST00000479004 COPS6Q7L5N1 327 aa26.59■■□□□ 1.85
TRIM8-203ENST00000479004 RIC1Q4ADV7 1423 aa26.58■■□□□ 1.85
TRIM8-203ENST00000479004 NTSR2O95665 410 aa26.58■■□□□ 1.85
TRIM8-203ENST00000479004 HOXB7P09629 217 aa26.58■■□□□ 1.85
TRIM8-203ENST00000479004 ALDH1B1P30837 517 aa26.58■■□□□ 1.85
TRIM8-203ENST00000479004 CCDC184Q52MB2 194 aa26.58■■□□□ 1.85
TRIM8-203ENST00000479004 PARP10Q53GL7 1025 aa26.58■■□□□ 1.85
TRIM8-203ENST00000479004 ZNF853P0CG23 659 aa26.57■■□□□ 1.84
TRIM8-203ENST00000479004 PPP1R42Q7Z4L9 355 aa26.57■■□□□ 1.84
TRIM8-203ENST00000479004 XAGE3Q8WTP9 111 aa26.57■■□□□ 1.84
TRIM8-203ENST00000479004 MBIPQ9NS73 344 aa26.57■■□□□ 1.84
TRIM8-203ENST00000479004 CCDC93Q567U6 631 aa26.56■■□□□ 1.84
TRIM8-203ENST00000479004 C16orf71Q8IYS4 520 aaPredicted RBP26.56■■□□□ 1.84
TRIM8-203ENST00000479004 RBM46Q8TBY0 533 aaKnown RBP26.56■■□□□ 1.84
TRIM8-203ENST00000479004 ANKRD36CQ5JPF3 1778 aa26.56■■□□□ 1.84
TRIM8-203ENST00000479004 AIMP1Q12904 312 aaKnown RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms