RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 BCL2L12Q9HB09 334 aa8.92□□□□□ -0.98
BRCA1-215ENST00000478531 ERBB4Q15303 1308 aa8.91□□□□□ -0.98
BRCA1-215ENST00000478531 DDR1Q08345 913 aa8.91□□□□□ -0.98
BRCA1-215ENST00000478531 AIMP1Q12904 312 aaKnown RBP8.91□□□□□ -0.98
BRCA1-215ENST00000478531 PDIA6Q15084 440 aa8.91□□□□□ -0.98
BRCA1-215ENST00000478531 TTLL7Q6ZT98 887 aa8.91□□□□□ -0.98
BRCA1-215ENST00000478531 ZBTB3Q9H5J0 574 aa8.91□□□□□ -0.98
BRCA1-215ENST00000478531 MYH16Q9H6N6 1097 aa8.91□□□□□ -0.98
BRCA1-215ENST00000478531 RTN4Q9NQC3 1192 aaKnown RBP8.91□□□□□ -0.98
BRCA1-215ENST00000478531 ZNF521Q96K83 1311 aa8.91□□□□□ -0.98
BRCA1-215ENST00000478531 ARFGEF2Q9Y6D5 1785 aa8.91□□□□□ -0.98
BRCA1-215ENST00000478531 NRXN2Q9P2S2 1712 aa8.9□□□□□ -0.98
BRCA1-215ENST00000478531 HNRNPUQ00839 825 aaKnown RBP eCLIP8.9□□□□□ -0.98
BRCA1-215ENST00000478531 GOLGA2Q08379 1002 aa8.9□□□□□ -0.98
BRCA1-215ENST00000478531 NFIXQ14938 502 aa8.9□□□□□ -0.98
BRCA1-215ENST00000478531 TWISTNBQ3B726 338 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-215ENST00000478531 TBC1D9BQ66K14 1250 aa8.9□□□□□ -0.98
BRCA1-215ENST00000478531 NLGN2Q8NFZ4 835 aa8.9□□□□□ -0.98
BRCA1-215ENST00000478531 ZNF652Q9Y2D9 606 aa8.9□□□□□ -0.98
BRCA1-215ENST00000478531 CACNA1FO60840 1977 aa8.9□□□□□ -0.98
BRCA1-215ENST00000478531 POLRMTO00411 1230 aaKnown RBP8.9□□□□□ -0.99
BRCA1-215ENST00000478531 TCERG1O14776 1098 aaKnown RBP8.9□□□□□ -0.99
BRCA1-215ENST00000478531 EXOSC9Q06265 439 aaKnown RBP8.9□□□□□ -0.99
BRCA1-215ENST00000478531 XAGE3Q8WTP9 111 aa8.9□□□□□ -0.99
BRCA1-215ENST00000478531 SYT17Q9BSW7 474 aa8.9□□□□□ -0.99
BRCA1-215ENST00000478531 DDX21Q9NR30 783 aaKnown RBP eCLIP8.9□□□□□ -0.99
BRCA1-215ENST00000478531 DBF4Q9UBU7 674 aaPredicted RBP8.9□□□□□ -0.99
BRCA1-215ENST00000478531 MAP3K15Q6ZN16 1313 aa8.9□□□□□ -0.99
BRCA1-215ENST00000478531 NPHP1O15259 732 aa8.89□□□□□ -0.99
BRCA1-215ENST00000478531 HLFQ16534 295 aa8.89□□□□□ -0.99
BRCA1-215ENST00000478531 C10orf71Q711Q0 1435 aa8.89□□□□□ -0.99
BRCA1-215ENST00000478531 COPS6Q7L5N1 327 aa8.89□□□□□ -0.99
BRCA1-215ENST00000478531 ANKRD31Q8N7Z5 1873 aa8.89□□□□□ -0.99
BRCA1-215ENST00000478531 CARMIL3Q8ND23 1372 aa8.89□□□□□ -0.99
BRCA1-215ENST00000478531 KIAA1551Q9HCM1 1747 aa8.89□□□□□ -0.99
BRCA1-215ENST00000478531 CACNA1SQ13698 1873 aa8.89□□□□□ -0.99
BRCA1-215ENST00000478531 FAM177BA6PVY3 158 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 TM4SF1P30408 202 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 CCDC30Q5VVM6 783 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 LRP10Q7Z4F1 713 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 CDCA7LQ96GN5 454 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 SETDB2Q96T68 719 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 WWC3Q9ULE0 1092 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 E9PSI1 815 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 SERPINB2P05120 415 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 CLEC4GQ6UXB4 293 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 PELP1Q8IZL8 1130 aaKnown RBP8.88□□□□□ -0.99
BRCA1-215ENST00000478531 STK31Q9BXU1 1019 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 HYPKQ9NX55 129 aa8.88□□□□□ -0.99
BRCA1-215ENST00000478531 NIP7Q9Y221 180 aaKnown RBP eCLIP8.88□□□□□ -0.99
BRCA1-215ENST00000478531 BRCA1P38398 1863 aaKnown RBP8.87□□□□□ -0.99
BRCA1-215ENST00000478531 COL11A2P13942 1736 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-215ENST00000478531 GPTP24298 496 aa8.87□□□□□ -0.99
BRCA1-215ENST00000478531 NBPF5PQ86XG9 351 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-215ENST00000478531 CCDC24Q8N4L8 307 aa8.87□□□□□ -0.99
BRCA1-215ENST00000478531 PHAXQ9H814 394 aaKnown RBP8.87□□□□□ -0.99
BRCA1-215ENST00000478531 CD2APQ9Y5K6 639 aa8.87□□□□□ -0.99
BRCA1-215ENST00000478531 PXDNLA1KZ92 1463 aa8.87□□□□□ -0.99
BRCA1-215ENST00000478531 ATP10DQ9P241 1426 aa8.87□□□□□ -0.99
BRCA1-215ENST00000478531 DLEC1Q9Y238 1755 aa8.87□□□□□ -0.99
BRCA1-215ENST00000478531 ERVV-1B6SEH8 477 aa8.86□□□□□ -0.99
BRCA1-215ENST00000478531 CNBD1Q8NA66 436 aa8.86□□□□□ -0.99
BRCA1-215ENST00000478531 ZNF428Q96B54 188 aa8.86□□□□□ -0.99
BRCA1-215ENST00000478531 CHMP4AQ9BY43 222 aa8.86□□□□□ -0.99
BRCA1-215ENST00000478531 SLFN5Q08AF3 891 aa8.86□□□□□ -0.99
BRCA1-215ENST00000478531 GIGYF2Q6Y7W6 1299 aaKnown RBP8.86□□□□□ -0.99
BRCA1-215ENST00000478531 TNRC6CQ9HCJ0 1690 aaKnown RBP8.86□□□□□ -0.99
BRCA1-215ENST00000478531 UBN2Q6ZU65 1347 aa8.85□□□□□ -0.99
BRCA1-215ENST00000478531 VAMP4O75379 141 aa8.85□□□□□ -0.99
BRCA1-215ENST00000478531 SLC4A2P04920 1241 aa8.85□□□□□ -0.99
BRCA1-215ENST00000478531 ST5P78524 1137 aa8.85□□□□□ -0.99
BRCA1-215ENST00000478531 PRR5LQ6MZQ0 368 aa8.85□□□□□ -0.99
BRCA1-215ENST00000478531 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
BRCA1-215ENST00000478531 A0A0G2JLW4 131 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-215ENST00000478531 RIC3Q7Z5B4 369 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 PLBD2Q8NHP8 589 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 DCAF8L1A6NGE4 600 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 RGL2O15211 777 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 DDX58O95786 925 aaKnown RBP8.84□□□□□ -0.99
BRCA1-215ENST00000478531 DPEP1P16444 411 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 CHRNA5P30532 468 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 GPR162Q16538 588 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 G2E3Q7L622 706 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 NUTM1Q86Y26 1132 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 POTEDQ86YR6 584 aa8.84□□□□□ -0.99
BRCA1-215ENST00000478531 LAMB2P55268 1798 aa8.83□□□□□ -1
BRCA1-215ENST00000478531 ATP5J2-PTCD1G3V325 749 aa8.83□□□□□ -1
BRCA1-215ENST00000478531 FKBP5Q13451 457 aaPredicted RBP8.83□□□□□ -1
BRCA1-215ENST00000478531 HSP90AB3PQ58FF7 597 aa8.83□□□□□ -1
BRCA1-215ENST00000478531 TPTE2Q6XPS3 522 aa8.83□□□□□ -1
BRCA1-215ENST00000478531 ZNF34Q8IZ26 560 aa8.83□□□□□ -1
BRCA1-215ENST00000478531 ARFGEF1Q9Y6D6 1849 aa8.83□□□□□ -1
BRCA1-215ENST00000478531 ABCC12Q96J65 1359 aa8.83□□□□□ -1
BRCA1-215ENST00000478531 ZBED9Q6R2W3 1325 aa8.83□□□□□ -1
BRCA1-215ENST00000478531 CHD4Q14839 1912 aa8.83□□□□□ -1
BRCA1-215ENST00000478531 TGFB2P61812 414 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 FLIIQ13045 1269 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 SUSD4Q5VX71 490 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 MYD88Q99836 296 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms