RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 GUCY1B3Q02153 619 aa16.7■□□□□ 0.26
NPHP4-208ENST00000478423 G2E3Q7L622 706 aa16.7■□□□□ 0.26
NPHP4-208ENST00000478423 YEATS2Q9ULM3 1422 aa16.7■□□□□ 0.26
NPHP4-208ENST00000478423 ABCA8O94911 1581 aa16.69■□□□□ 0.26
NPHP4-208ENST00000478423 IL2RBP14784 551 aa16.69■□□□□ 0.26
NPHP4-208ENST00000478423 LTKP29376 864 aa16.69■□□□□ 0.26
NPHP4-208ENST00000478423 FILIP1LQ4L180 1135 aa16.69■□□□□ 0.26
NPHP4-208ENST00000478423 IL27Q8NEV9 243 aa16.69■□□□□ 0.26
NPHP4-208ENST00000478423 ARHGEF5Q12774 1597 aa16.69■□□□□ 0.26
NPHP4-208ENST00000478423 WASF1Q92558 559 aa16.69■□□□□ 0.26
NPHP4-208ENST00000478423 CDC5LQ99459 802 aaKnown RBP16.69■□□□□ 0.26
NPHP4-208ENST00000478423 SCAND2PQ9GZW5 306 aaPredicted RBP16.69■□□□□ 0.26
NPHP4-208ENST00000478423 SERPINC1P01008 464 aa16.68■□□□□ 0.26
NPHP4-208ENST00000478423 USP5P45974 858 aa16.68■□□□□ 0.26
NPHP4-208ENST00000478423 HAND2P61296 217 aa16.68■□□□□ 0.26
NPHP4-208ENST00000478423 CCT2P78371 535 aaKnown RBP16.68■□□□□ 0.26
NPHP4-208ENST00000478423 DZIP1Q86YF9 867 aaKnown RBP16.68■□□□□ 0.26
NPHP4-208ENST00000478423 MNS1Q8NEH6 495 aa16.68■□□□□ 0.26
NPHP4-208ENST00000478423 DCAF5Q96JK2 942 aa16.68■□□□□ 0.26
NPHP4-208ENST00000478423 GDPD2Q9HCC8 539 aa16.68■□□□□ 0.26
NPHP4-208ENST00000478423 ZBTB7BO15156 539 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-208ENST00000478423 ACSBG1Q96GR2 724 aa16.68■□□□□ 0.26
NPHP4-208ENST00000478423 C8orf76Q96K31 380 aa16.68■□□□□ 0.26
NPHP4-208ENST00000478423 TMEM2Q9UHN6 1383 aa16.68■□□□□ 0.26
NPHP4-208ENST00000478423 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
NPHP4-208ENST00000478423 NAP1L1P55209 391 aaKnown RBP16.68■□□□□ 0.26
NPHP4-208ENST00000478423 RNMTO43148 476 aaKnown RBP16.67■□□□□ 0.26
NPHP4-208ENST00000478423 EPS15P42566 896 aa16.67■□□□□ 0.26
NPHP4-208ENST00000478423 MKNK2Q9HBH9 465 aa16.67■□□□□ 0.26
NPHP4-208ENST00000478423 CHL1O00533 1208 aa16.67■□□□□ 0.26
NPHP4-208ENST00000478423 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
NPHP4-208ENST00000478423 MAP3K11Q16584 847 aa16.67■□□□□ 0.26
NPHP4-208ENST00000478423 CEP57L1Q8IYX8 460 aa16.67■□□□□ 0.26
NPHP4-208ENST00000478423 ESYT1Q9BSJ8 1104 aa16.67■□□□□ 0.26
NPHP4-208ENST00000478423 GCC2Q8IWJ2 1684 aa16.67■□□□□ 0.26
NPHP4-208ENST00000478423 SBNO1A3KN83 1393 aa16.67■□□□□ 0.26
NPHP4-208ENST00000478423 CAMK4Q16566 473 aa16.66■□□□□ 0.26
NPHP4-208ENST00000478423 CCDC196A0A1B0GTZ2 297 aa16.66■□□□□ 0.26
NPHP4-208ENST00000478423 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
NPHP4-208ENST00000478423 KRT18P05783 430 aaKnown RBP16.66■□□□□ 0.26
NPHP4-208ENST00000478423 IQCA1Q86XH1 822 aa16.66■□□□□ 0.26
NPHP4-208ENST00000478423 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
NPHP4-208ENST00000478423 IFIT3O14879 490 aaKnown RBP16.66■□□□□ 0.26
NPHP4-208ENST00000478423 POLR3DP05423 398 aaPredicted RBP16.66■□□□□ 0.26
NPHP4-208ENST00000478423 HMGB2P26583 209 aaKnown RBP16.66■□□□□ 0.26
NPHP4-208ENST00000478423 DDB1Q16531 1140 aa16.66■□□□□ 0.26
NPHP4-208ENST00000478423 NEK1Q96PY6 1258 aa16.66■□□□□ 0.26
NPHP4-208ENST00000478423 TCEANC2Q96MN5 208 aa16.66■□□□□ 0.26
NPHP4-208ENST00000478423 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
NPHP4-208ENST00000478423 DDX21Q9NR30 783 aaKnown RBP eCLIP16.65■□□□□ 0.26
NPHP4-208ENST00000478423 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
NPHP4-208ENST00000478423 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
NPHP4-208ENST00000478423 TFIP11Q9UBB9 837 aaKnown RBP16.65■□□□□ 0.26
NPHP4-208ENST00000478423 KDM6BO15054 1643 aa16.65■□□□□ 0.26
NPHP4-208ENST00000478423 TOM1O60784 492 aa16.65■□□□□ 0.26
NPHP4-208ENST00000478423 PPFIA3O75145 1194 aa16.65■□□□□ 0.26
NPHP4-208ENST00000478423 UBAP1LF5GYI3 381 aa16.64■□□□□ 0.26
NPHP4-208ENST00000478423 TTF1Q15361 905 aaPredicted RBP16.64■□□□□ 0.26
NPHP4-208ENST00000478423 STX6O43752 255 aa16.64■□□□□ 0.25
NPHP4-208ENST00000478423 ATP2B3Q16720 1220 aa16.64■□□□□ 0.25
NPHP4-208ENST00000478423 FILIP1Q7Z7B0 1213 aa16.64■□□□□ 0.25
NPHP4-208ENST00000478423 MAGEC2Q9UBF1 373 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-208ENST00000478423 SLC12A7Q9Y666 1083 aa16.64■□□□□ 0.25
NPHP4-208ENST00000478423 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-208ENST00000478423 PLEKHM2Q8IWE5 1019 aa16.64■□□□□ 0.25
NPHP4-208ENST00000478423 CTCFLQ8NI51 663 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-208ENST00000478423 RPGRQ92834 1020 aaKnown RBP16.64■□□□□ 0.25
NPHP4-208ENST00000478423 RNF41Q9H4P4 317 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-208ENST00000478423 ZNF287Q9HBT7 754 aa16.64■□□□□ 0.25
NPHP4-208ENST00000478423 SBNO2Q9Y2G9 1366 aa16.64■□□□□ 0.25
NPHP4-208ENST00000478423 GPS2Q13227 327 aa16.64■□□□□ 0.25
NPHP4-208ENST00000478423 BAG4O95429 457 aaKnown RBP16.63■□□□□ 0.25
NPHP4-208ENST00000478423 GJB2P29033 226 aa16.63■□□□□ 0.25
NPHP4-208ENST00000478423 ATP6V1AP38606 617 aa16.63■□□□□ 0.25
NPHP4-208ENST00000478423 LGR6Q9HBX8 967 aa16.63■□□□□ 0.25
NPHP4-208ENST00000478423 HMG20BQ9P0W2 317 aa16.63■□□□□ 0.25
NPHP4-208ENST00000478423 SOS1Q07889 1333 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-208ENST00000478423 C6orf229H3BNL8 230 aa16.63■□□□□ 0.25
NPHP4-208ENST00000478423 ZHX3Q9H4I2 956 aa16.63■□□□□ 0.25
NPHP4-208ENST00000478423 AK7Q96M32 723 aa16.63■□□□□ 0.25
NPHP4-208ENST00000478423 RBM8AQ9Y5S9 174 aaKnown RBP16.62■□□□□ 0.25
NPHP4-208ENST00000478423 ESPNB1AK53 854 aa16.62■□□□□ 0.25
NPHP4-208ENST00000478423 SEC24BO95487 1268 aa16.62■□□□□ 0.25
NPHP4-208ENST00000478423 BRF1Q92994 677 aa16.62■□□□□ 0.25
NPHP4-208ENST00000478423 DACH1Q9UI36 760 aa16.62■□□□□ 0.25
NPHP4-208ENST00000478423 USP16Q9Y5T5 823 aa16.62■□□□□ 0.25
NPHP4-208ENST00000478423 ZNF790Q6PG37 636 aa16.62■□□□□ 0.25
NPHP4-208ENST00000478423 SSBP05455 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
NPHP4-208ENST00000478423 STIM1Q13586 685 aa16.62■□□□□ 0.25
NPHP4-208ENST00000478423 CCDC152Q4G0S7 254 aa16.61■□□□□ 0.25
NPHP4-208ENST00000478423 NBPF6Q5VWK0 638 aa16.61■□□□□ 0.25
NPHP4-208ENST00000478423 NBPF5PQ86XG9 351 aaPredicted RBP16.61■□□□□ 0.25
NPHP4-208ENST00000478423 NBPF4Q96M43 638 aa16.61■□□□□ 0.25
NPHP4-208ENST00000478423 MICU3Q86XE3 530 aa16.61■□□□□ 0.25
NPHP4-208ENST00000478423 TMOD2Q9NZR1 351 aa16.61■□□□□ 0.25
NPHP4-208ENST00000478423 IQSEC3Q9UPP2 1182 aaPredicted RBP16.61■□□□□ 0.25
NPHP4-208ENST00000478423 GOLGA8AA7E2F4 631 aa16.61■□□□□ 0.25
NPHP4-208ENST00000478423 RFC4P35249 363 aa16.61■□□□□ 0.25
NPHP4-208ENST00000478423 NECAB1Q8N987 351 aa16.61■□□□□ 0.25
NPHP4-208ENST00000478423 SIRT1Q96EB6 747 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms