RNA–Protein interactions for RNA: ENST00000477696.5

CD40-205, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 771 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-205ENST00000477696 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
CD40-205ENST00000477696 CARMIL3Q8ND23 1372 aa11.21□□□□□ -0.61
CD40-205ENST00000477696 NPHP1O15259 732 aa11.21□□□□□ -0.61
CD40-205ENST00000477696 DPEP1P16444 411 aa11.21□□□□□ -0.61
CD40-205ENST00000477696 BICDL1Q6ZP65 573 aa11.21□□□□□ -0.61
CD40-205ENST00000477696 CFAP44Q96MT7 982 aa11.21□□□□□ -0.61
CD40-205ENST00000477696 GPBP1L1Q9HC44 474 aaPredicted RBP11.21□□□□□ -0.61
CD40-205ENST00000477696 PIM2Q9P1W9 311 aa11.21□□□□□ -0.61
CD40-205ENST00000477696 WWC3Q9ULE0 1092 aa11.21□□□□□ -0.61
CD40-205ENST00000477696 LAS1LQ9Y4W2 734 aaKnown RBP11.21□□□□□ -0.61
CD40-205ENST00000477696 CACNA1SQ13698 1873 aa11.21□□□□□ -0.62
CD40-205ENST00000477696 WDR90Q96KV7 1748 aa11.21□□□□□ -0.62
CD40-205ENST00000477696 DICER1Q9UPY3 1922 aaKnown RBP11.2□□□□□ -0.62
CD40-205ENST00000477696 ERVV-1B6SEH8 477 aa11.2□□□□□ -0.62
CD40-205ENST00000477696 KCNA3P22001 575 aa11.2□□□□□ -0.62
CD40-205ENST00000477696 HOXD11P31277 338 aaPredicted RBP11.2□□□□□ -0.62
CD40-205ENST00000477696 PIP4K2AP48426 406 aaPredicted RBP11.2□□□□□ -0.62
CD40-205ENST00000477696 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
CD40-205ENST00000477696 TBC1D9BQ66K14 1250 aa11.2□□□□□ -0.62
CD40-205ENST00000477696 KIF6Q6ZMV9 814 aa11.2□□□□□ -0.62
CD40-205ENST00000477696 H0YIN7 160 aa11.19□□□□□ -0.62
CD40-205ENST00000477696 HOXB7P09629 217 aa11.19□□□□□ -0.62
CD40-205ENST00000477696 PDE6BP35913 854 aa11.19□□□□□ -0.62
CD40-205ENST00000477696 GNAI1P63096 354 aa11.19□□□□□ -0.62
CD40-205ENST00000477696 ST5P78524 1137 aa11.19□□□□□ -0.62
CD40-205ENST00000477696 NCBP3Q53F19 620 aaKnown RBP11.19□□□□□ -0.62
CD40-205ENST00000477696 BRIP1Q9BX63 1249 aa11.19□□□□□ -0.62
CD40-205ENST00000477696 CHMP4AQ9BY43 222 aa11.19□□□□□ -0.62
CD40-205ENST00000477696 IFT57Q9NWB7 429 aa11.19□□□□□ -0.62
CD40-205ENST00000477696 BCS1LQ9Y276 419 aa11.19□□□□□ -0.62
CD40-205ENST00000477696 FER1L6Q2WGJ9 1857 aa11.19□□□□□ -0.62
CD40-205ENST00000477696 KIF3CO14782 793 aa11.18□□□□□ -0.62
CD40-205ENST00000477696 MYL6BP14649 208 aa11.18□□□□□ -0.62
CD40-205ENST00000477696 EIF2S2P20042 333 aaKnown RBP11.18□□□□□ -0.62
CD40-205ENST00000477696 CCDC184Q52MB2 194 aa11.18□□□□□ -0.62
CD40-205ENST00000477696 TPTE2Q6XPS3 522 aa11.18□□□□□ -0.62
CD40-205ENST00000477696 NBPF5PQ86XG9 351 aaPredicted RBP11.18□□□□□ -0.62
CD40-205ENST00000477696 NGEFQ8N5V2 710 aa11.18□□□□□ -0.62
CD40-205ENST00000477696 CNBD1Q8NA66 436 aa11.18□□□□□ -0.62
CD40-205ENST00000477696 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
CD40-205ENST00000477696 MAP3K15Q6ZN16 1313 aa11.17□□□□□ -0.62
CD40-205ENST00000477696 ZNF853P0CG23 659 aa11.17□□□□□ -0.62
CD40-205ENST00000477696 CCDC27Q2M243 656 aa11.17□□□□□ -0.62
CD40-205ENST00000477696 C2CD5Q86YS7 1000 aa11.17□□□□□ -0.62
CD40-205ENST00000477696 NIP7Q9Y221 180 aaKnown RBP eCLIP11.17□□□□□ -0.62
CD40-205ENST00000477696 CHRNA5P30532 468 aa11.16□□□□□ -0.62
CD40-205ENST00000477696 PRR5LQ6MZQ0 368 aa11.16□□□□□ -0.62
CD40-205ENST00000477696 ARHGAP27Q6ZUM4 889 aa11.16□□□□□ -0.62
CD40-205ENST00000477696 TTLL6Q8N841 843 aa11.16□□□□□ -0.62
CD40-205ENST00000477696 ZNF526Q8TF50 670 aaPredicted RBP11.16□□□□□ -0.62
CD40-205ENST00000477696 NYXQ9GZU5 481 aa11.16□□□□□ -0.62
CD40-205ENST00000477696 MBIPQ9NS73 344 aa11.16□□□□□ -0.62
CD40-205ENST00000477696 HSPA6P17066 643 aa11.15□□□□□ -0.62
CD40-205ENST00000477696 GTF2E1P29083 439 aaPredicted RBP11.15□□□□□ -0.62
CD40-205ENST00000477696 HLFQ16534 295 aa11.15□□□□□ -0.62
CD40-205ENST00000477696 DDX21Q9NR30 783 aaKnown RBP eCLIP11.15□□□□□ -0.62
CD40-205ENST00000477696 NUP98P52948 1817 aa11.14□□□□□ -0.63
CD40-205ENST00000477696 PDIA6Q15084 440 aa11.14□□□□□ -0.63
CD40-205ENST00000477696 HSP90AB3PQ58FF7 597 aa11.14□□□□□ -0.63
CD40-205ENST00000477696 HDGFL1Q5TGJ6 251 aa11.14□□□□□ -0.63
CD40-205ENST00000477696 DUSP27Q5VZP5 1158 aa11.14□□□□□ -0.63
CD40-205ENST00000477696 TTLL7Q6ZT98 887 aa11.14□□□□□ -0.63
CD40-205ENST00000477696 ZNF622Q969S3 477 aaKnown RBP eCLIP11.14□□□□□ -0.63
CD40-205ENST00000477696 DBF4Q9UBU7 674 aaPredicted RBP11.14□□□□□ -0.63
CD40-205ENST00000477696 IL16Q14005 1332 aa11.13□□□□□ -0.63
CD40-205ENST00000477696 PARP10Q53GL7 1025 aa11.13□□□□□ -0.63
CD40-205ENST00000477696 STYK1Q6J9G0 422 aa11.13□□□□□ -0.63
CD40-205ENST00000477696 GIGYF2Q6Y7W6 1299 aaKnown RBP11.13□□□□□ -0.63
CD40-205ENST00000477696 COPS6Q7L5N1 327 aa11.13□□□□□ -0.63
CD40-205ENST00000477696 PPP1R42Q7Z4L9 355 aa11.13□□□□□ -0.63
CD40-205ENST00000477696 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
CD40-205ENST00000477696 NECTIN2Q92692 538 aa11.13□□□□□ -0.63
CD40-205ENST00000477696 CNKSR1Q969H4 720 aa11.13□□□□□ -0.63
CD40-205ENST00000477696 ZBTB3Q9H5J0 574 aa11.13□□□□□ -0.63
CD40-205ENST00000477696 HYPKQ9NX55 129 aa11.13□□□□□ -0.63
CD40-205ENST00000477696 KRT24Q2M2I5 525 aa11.12□□□□□ -0.63
CD40-205ENST00000477696 PROSER3Q2NL68 480 aa11.12□□□□□ -0.63
CD40-205ENST00000477696 LRP10Q7Z4F1 713 aa11.12□□□□□ -0.63
CD40-205ENST00000477696 WDR63Q8IWG1 891 aa11.12□□□□□ -0.63
CD40-205ENST00000477696 ZNF34Q8IZ26 560 aa11.12□□□□□ -0.63
CD40-205ENST00000477696 FAM9BQ8IZU0 186 aa11.12□□□□□ -0.63
CD40-205ENST00000477696 MASTLQ96GX5 879 aa11.12□□□□□ -0.63
CD40-205ENST00000477696 CHPF2Q9P2E5 772 aa11.12□□□□□ -0.63
CD40-205ENST00000477696 IBTKQ9P2D0 1353 aaPredicted RBP11.12□□□□□ -0.63
CD40-205ENST00000477696 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
CD40-205ENST00000477696 FAM177BA6PVY3 158 aa11.11□□□□□ -0.63
CD40-205ENST00000477696 SRGNP10124 158 aa11.11□□□□□ -0.63
CD40-205ENST00000477696 AIMP1Q12904 312 aaKnown RBP11.11□□□□□ -0.63
CD40-205ENST00000477696 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
CD40-205ENST00000477696 C9orf131Q5VYM1 1079 aa11.11□□□□□ -0.63
CD40-205ENST00000477696 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
CD40-205ENST00000477696 XAGE3Q8WTP9 111 aa11.11□□□□□ -0.63
CD40-205ENST00000477696 SLX4Q8IY92 1834 aa11.11□□□□□ -0.63
CD40-205ENST00000477696 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
CD40-205ENST00000477696 KLRG2A4D1S0 409 aaPredicted RBP11.1□□□□□ -0.63
CD40-205ENST00000477696 TOMM70O94826 608 aa11.1□□□□□ -0.63
CD40-205ENST00000477696 ANXA1P04083 346 aa11.1□□□□□ -0.63
CD40-205ENST00000477696 NPR1P16066 1061 aa11.1□□□□□ -0.63
CD40-205ENST00000477696 GPTP24298 496 aa11.1□□□□□ -0.63
CD40-205ENST00000477696 ALDH1B1P30837 517 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms