RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 NPM2Q86SE8 214 aaKnown RBP12.72□□□□□ -0.37
NIFK-205ENST00000477693 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
NIFK-205ENST00000477693 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
NIFK-205ENST00000477693 BCL2L12Q9HB09 334 aa12.72□□□□□ -0.37
NIFK-205ENST00000477693 MBIPQ9NS73 344 aa12.72□□□□□ -0.37
NIFK-205ENST00000477693 LAS1LQ9Y4W2 734 aaKnown RBP12.72□□□□□ -0.37
NIFK-205ENST00000477693 CAMTA2O94983 1202 aa12.71□□□□□ -0.37
NIFK-205ENST00000477693 TM4SF1P30408 202 aa12.71□□□□□ -0.37
NIFK-205ENST00000477693 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.37
NIFK-205ENST00000477693 GNAI1P63096 354 aa12.71□□□□□ -0.37
NIFK-205ENST00000477693 YTHDC1Q96MU7 727 aaKnown RBP12.71□□□□□ -0.37
NIFK-205ENST00000477693 ZNF330Q9Y3S2 320 aaPredicted RBP12.71□□□□□ -0.37
NIFK-205ENST00000477693 RGL2O15211 777 aa12.7□□□□□ -0.38
NIFK-205ENST00000477693 HOXB7P09629 217 aa12.7□□□□□ -0.38
NIFK-205ENST00000477693 DDR1Q08345 913 aa12.7□□□□□ -0.38
NIFK-205ENST00000477693 DZIP3Q86Y13 1208 aaKnown RBP12.7□□□□□ -0.38
NIFK-205ENST00000477693 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
NIFK-205ENST00000477693 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
NIFK-205ENST00000477693 PARP3Q9Y6F1 533 aa12.7□□□□□ -0.38
NIFK-205ENST00000477693 BCORQ6W2J9 1755 aa12.7□□□□□ -0.38
NIFK-205ENST00000477693 C10orf71Q711Q0 1435 aa12.7□□□□□ -0.38
NIFK-205ENST00000477693 IL16Q14005 1332 aa12.69□□□□□ -0.38
NIFK-205ENST00000477693 POLRMTO00411 1230 aaKnown RBP12.69□□□□□ -0.38
NIFK-205ENST00000477693 NFIXQ14938 502 aa12.69□□□□□ -0.38
NIFK-205ENST00000477693 KRT24Q2M2I5 525 aa12.69□□□□□ -0.38
NIFK-205ENST00000477693 NLGN2Q8NFZ4 835 aa12.69□□□□□ -0.38
NIFK-205ENST00000477693 KIF13BQ9NQT8 1826 aa12.68□□□□□ -0.38
NIFK-205ENST00000477693 PDIA6Q15084 440 aa12.68□□□□□ -0.38
NIFK-205ENST00000477693 CLEC4GQ6UXB4 293 aa12.68□□□□□ -0.38
NIFK-205ENST00000477693 LRP10Q7Z4F1 713 aa12.68□□□□□ -0.38
NIFK-205ENST00000477693 NRXN2Q9P2S2 1712 aa12.68□□□□□ -0.38
NIFK-205ENST00000477693 EIF2S2P20042 333 aaKnown RBP12.67□□□□□ -0.38
NIFK-205ENST00000477693 TBC1D9BQ66K14 1250 aa12.67□□□□□ -0.38
NIFK-205ENST00000477693 WDR63Q8IWG1 891 aa12.67□□□□□ -0.38
NIFK-205ENST00000477693 ERVV-1B6SEH8 477 aa12.66□□□□□ -0.38
NIFK-205ENST00000477693 MYL6BP14649 208 aa12.66□□□□□ -0.38
NIFK-205ENST00000477693 TGFB2P61812 414 aa12.66□□□□□ -0.38
NIFK-205ENST00000477693 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
NIFK-205ENST00000477693 ZNF652Q9Y2D9 606 aa12.66□□□□□ -0.38
NIFK-205ENST00000477693 CARMIL3Q8ND23 1372 aa12.66□□□□□ -0.38
NIFK-205ENST00000477693 PXDNLA1KZ92 1463 aa12.65□□□□□ -0.38
NIFK-205ENST00000477693 MAP3K15Q6ZN16 1313 aa12.65□□□□□ -0.38
NIFK-205ENST00000477693 SERPINB2P05120 415 aa12.65□□□□□ -0.38
NIFK-205ENST00000477693 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
NIFK-205ENST00000477693 HDGFL1Q5TGJ6 251 aa12.65□□□□□ -0.38
NIFK-205ENST00000477693 DDX21Q9NR30 783 aaKnown RBP eCLIP12.65□□□□□ -0.38
NIFK-205ENST00000477693 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
NIFK-205ENST00000477693 ZNF521Q96K83 1311 aa12.64□□□□□ -0.39
NIFK-205ENST00000477693 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
NIFK-205ENST00000477693 BICDL1Q6ZP65 573 aa12.64□□□□□ -0.39
NIFK-205ENST00000477693 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
NIFK-205ENST00000477693 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
NIFK-205ENST00000477693 SETDB2Q96T68 719 aa12.64□□□□□ -0.39
NIFK-205ENST00000477693 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
NIFK-205ENST00000477693 ATP10DQ9P241 1426 aa12.63□□□□□ -0.39
NIFK-205ENST00000477693 GOLGB1Q14789 3259 aaKnown RBP12.63□□□□□ -0.39
NIFK-205ENST00000477693 AFDNP55196 1824 aaKnown RBP12.63□□□□□ -0.39
NIFK-205ENST00000477693 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
NIFK-205ENST00000477693 HLFQ16534 295 aa12.63□□□□□ -0.39
NIFK-205ENST00000477693 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
NIFK-205ENST00000477693 NECTIN2Q92692 538 aa12.63□□□□□ -0.39
NIFK-205ENST00000477693 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
NIFK-205ENST00000477693 CHPF2Q9P2E5 772 aa12.63□□□□□ -0.39
NIFK-205ENST00000477693 DBF4Q9UBU7 674 aaPredicted RBP12.63□□□□□ -0.39
NIFK-205ENST00000477693 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
NIFK-205ENST00000477693 ANXA1P04083 346 aa12.62□□□□□ -0.39
NIFK-205ENST00000477693 GIGYF2Q6Y7W6 1299 aaKnown RBP12.62□□□□□ -0.39
NIFK-205ENST00000477693 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
NIFK-205ENST00000477693 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
NIFK-205ENST00000477693 UTRNP46939 3433 aa12.62□□□□□ -0.39
NIFK-205ENST00000477693 E9PSI1 815 aa12.61□□□□□ -0.39
NIFK-205ENST00000477693 ELL2O00472 640 aaPredicted RBP12.61□□□□□ -0.39
NIFK-205ENST00000477693 KCNA3P22001 575 aa12.61□□□□□ -0.39
NIFK-205ENST00000477693 GPR162Q16538 588 aa12.61□□□□□ -0.39
NIFK-205ENST00000477693 PRR5LQ6MZQ0 368 aa12.61□□□□□ -0.39
NIFK-205ENST00000477693 COPS6Q7L5N1 327 aa12.61□□□□□ -0.39
NIFK-205ENST00000477693 CNBD1Q8NA66 436 aa12.61□□□□□ -0.39
NIFK-205ENST00000477693 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
NIFK-205ENST00000477693 HYPKQ9NX55 129 aa12.61□□□□□ -0.39
NIFK-205ENST00000477693 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
NIFK-205ENST00000477693 A0A0G2JLW4 131 aa12.6□□□□□ -0.39
NIFK-205ENST00000477693 DPEP1P16444 411 aa12.6□□□□□ -0.39
NIFK-205ENST00000477693 YBX3P16989 372 aaKnown RBP eCLIP12.6□□□□□ -0.393e-7■□□□□ 10.8
NIFK-205ENST00000477693 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
NIFK-205ENST00000477693 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
NIFK-205ENST00000477693 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
NIFK-205ENST00000477693 N4BP2Q86UW6 1770 aaPredicted RBP12.59□□□□□ -0.39
NIFK-205ENST00000477693 AIMP1Q12904 312 aaKnown RBP12.59□□□□□ -0.39
NIFK-205ENST00000477693 TWISTNBQ3B726 338 aaPredicted RBP12.59□□□□□ -0.39
NIFK-205ENST00000477693 NBPF5PQ86XG9 351 aaPredicted RBP12.59□□□□□ -0.39
NIFK-205ENST00000477693 ZNF34Q8IZ26 560 aa12.59□□□□□ -0.39
NIFK-205ENST00000477693 BRIP1Q9BX63 1249 aa12.59□□□□□ -0.39
NIFK-205ENST00000477693 MYH16Q9H6N6 1097 aa12.59□□□□□ -0.39
NIFK-205ENST00000477693 NUP98P52948 1817 aa12.59□□□□□ -0.39
NIFK-205ENST00000477693 UBN2Q6ZU65 1347 aa12.59□□□□□ -0.39
NIFK-205ENST00000477693 GRIN3BO60391 1043 aa12.58□□□□□ -0.4
NIFK-205ENST00000477693 BRCA1P38398 1863 aaKnown RBP12.58□□□□□ -0.4
NIFK-205ENST00000477693 ST5P78524 1137 aa12.58□□□□□ -0.4
NIFK-205ENST00000477693 TPTE2Q6XPS3 522 aa12.58□□□□□ -0.4
NIFK-205ENST00000477693 PELP1Q8IZL8 1130 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms