RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 DPEP1P16444 411 aa29.06■■■□□ 2.24
SF1-214ENST00000477596 HDGFL1Q5TGJ6 251 aa29.05■■■□□ 2.24
SF1-214ENST00000477596 CCDC24Q8N4L8 307 aa29.05■■■□□ 2.24
SF1-214ENST00000477596 BRCA1P38398 1863 aaKnown RBP29.04■■■□□ 2.24
SF1-214ENST00000477596 NUP98P52948 1817 aa29.04■■■□□ 2.24
SF1-214ENST00000477596 MAP3K15Q6ZN16 1313 aa29.04■■■□□ 2.24
SF1-214ENST00000477596 ELL2O00472 640 aaPredicted RBP29.04■■■□□ 2.24
SF1-214ENST00000477596 TGFB2P61812 414 aa29.04■■■□□ 2.24
SF1-214ENST00000477596 ZBTB3Q9H5J0 574 aa29.04■■■□□ 2.24
SF1-214ENST00000477596 CHPF2Q9P2E5 772 aa29.04■■■□□ 2.24
SF1-214ENST00000477596 ZNF652Q9Y2D9 606 aa29.04■■■□□ 2.24
SF1-214ENST00000477596 ANKRD31Q8N7Z5 1873 aa29.04■■■□□ 2.24
SF1-214ENST00000477596 HOXB7P09629 217 aa29.03■■■□□ 2.24
SF1-214ENST00000477596 NCBP3Q53F19 620 aaKnown RBP29.03■■■□□ 2.24
SF1-214ENST00000477596 DIEXFQ68CQ4 756 aaKnown RBP29.03■■■□□ 2.24
SF1-214ENST00000477596 CLEC4GQ6UXB4 293 aa29.03■■■□□ 2.24
SF1-214ENST00000477596 KIF6Q6ZMV9 814 aa29.03■■■□□ 2.24
SF1-214ENST00000477596 C8orf58Q8NAV2 365 aa29.03■■■□□ 2.24
SF1-214ENST00000477596 SETDB2Q96T68 719 aa29.03■■■□□ 2.24
SF1-214ENST00000477596 CHRNA5P30532 468 aa29.02■■■□□ 2.24
SF1-214ENST00000477596 PRR5LQ6MZQ0 368 aa29.02■■■□□ 2.24
SF1-214ENST00000477596 CCER2I3L3R5 266 aa29.01■■■□□ 2.23
SF1-214ENST00000477596 NIP7Q9Y221 180 aaKnown RBP eCLIP29.01■■■□□ 2.23
SF1-214ENST00000477596 IL16Q14005 1332 aa29■■■□□ 2.23
SF1-214ENST00000477596 KCNA3P22001 575 aa29■■■□□ 2.23
SF1-214ENST00000477596 TSPYL6Q8N831 410 aa29■■■□□ 2.23
SF1-214ENST00000477596 DDX21Q9NR30 783 aaKnown RBP eCLIP29■■■□□ 2.23
SF1-214ENST00000477596 ERVV-1B6SEH8 477 aa28.99■■■□□ 2.23
SF1-214ENST00000477596 XAGE3Q8WTP9 111 aa28.99■■■□□ 2.23
SF1-214ENST00000477596 COL11A2P13942 1736 aaPredicted RBP28.98■■■□□ 2.23
SF1-214ENST00000477596 RGL2O15211 777 aa28.98■■■□□ 2.23
SF1-214ENST00000477596 AIMP1Q12904 312 aaKnown RBP28.98■■■□□ 2.23
SF1-214ENST00000477596 CNBD1Q8NA66 436 aa28.98■■■□□ 2.23
SF1-214ENST00000477596 ATP10DQ9P241 1426 aa28.97■■■□□ 2.23
SF1-214ENST00000477596 FAM177BA6PVY3 158 aa28.97■■■□□ 2.23
SF1-214ENST00000477596 COPS6Q7L5N1 327 aa28.97■■■□□ 2.23
SF1-214ENST00000477596 SPINK5Q9NQ38 1064 aaPredicted RBP28.97■■■□□ 2.23
SF1-214ENST00000477596 FANCIQ9NVI1 1328 aa28.96■■■□□ 2.23
SF1-214ENST00000477596 DLEC1Q9Y238 1755 aa28.96■■■□□ 2.23
SF1-214ENST00000477596 WDR63Q8IWG1 891 aa28.96■■■□□ 2.23
SF1-214ENST00000477596 MIER1Q8N108 512 aa28.96■■■□□ 2.23
SF1-214ENST00000477596 CHD4Q14839 1912 aa28.95■■■□□ 2.23
SF1-214ENST00000477596 GPTP24298 496 aa28.95■■■□□ 2.22
SF1-214ENST00000477596 NBPF5PQ86XG9 351 aaPredicted RBP28.95■■■□□ 2.22
SF1-214ENST00000477596 BCS1LQ9Y276 419 aa28.95■■■□□ 2.22
SF1-214ENST00000477596 UBN2Q6ZU65 1347 aa28.94■■■□□ 2.22
SF1-214ENST00000477596 DBF4Q9UBU7 674 aaPredicted RBP28.94■■■□□ 2.22
SF1-214ENST00000477596 NPHP1O15259 732 aa28.93■■■□□ 2.22
SF1-214ENST00000477596 GIGYF2Q6Y7W6 1299 aaKnown RBP28.93■■■□□ 2.22
SF1-214ENST00000477596 GRIN3BO60391 1043 aa28.92■■■□□ 2.22
SF1-214ENST00000477596 C2CD5Q86YS7 1000 aa28.92■■■□□ 2.22
SF1-214ENST00000477596 ANKRD36CQ5JPF3 1778 aa28.92■■■□□ 2.22
SF1-214ENST00000477596 ZNF521Q96K83 1311 aa28.92■■■□□ 2.22
SF1-214ENST00000477596 YY1P25490 414 aa28.91■■■□□ 2.22
SF1-214ENST00000477596 ST5P78524 1137 aa28.91■■■□□ 2.22
SF1-214ENST00000477596 BRIP1Q9BX63 1249 aa28.91■■■□□ 2.22
SF1-214ENST00000477596 TNRC6CQ9HCJ0 1690 aaKnown RBP28.9■■■□□ 2.22
SF1-214ENST00000477596 ZNF34Q8IZ26 560 aa28.9■■■□□ 2.22
SF1-214ENST00000477596 PIM2Q9P1W9 311 aa28.9■■■□□ 2.22
SF1-214ENST00000477596 ARFGEF1Q9Y6D6 1849 aa28.9■■■□□ 2.22
SF1-214ENST00000477596 ABCC12Q96J65 1359 aa28.89■■■□□ 2.22
SF1-214ENST00000477596 TCERG1O14776 1098 aaKnown RBP28.89■■■□□ 2.22
SF1-214ENST00000477596 TWISTNBQ3B726 338 aaPredicted RBP28.88■■■□□ 2.21
SF1-214ENST00000477596 PHAXQ9H814 394 aaKnown RBP28.88■■■□□ 2.21
SF1-214ENST00000477596 HYPKQ9NX55 129 aa28.88■■■□□ 2.21
SF1-214ENST00000477596 SUSD4Q5VX71 490 aa28.87■■■□□ 2.21
SF1-214ENST00000477596 NUTM1Q86Y26 1132 aa28.87■■■□□ 2.21
SF1-214ENST00000477596 ARFGEF2Q9Y6D5 1785 aa28.87■■■□□ 2.21
SF1-214ENST00000477596 H0YIN7 160 aa28.86■■■□□ 2.21
SF1-214ENST00000477596 PDE6BP35913 854 aa28.86■■■□□ 2.21
SF1-214ENST00000477596 DALRD3Q5D0E6 543 aaKnown RBP28.86■■■□□ 2.21
SF1-214ENST00000477596 TPTE2Q6XPS3 522 aa28.86■■■□□ 2.21
SF1-214ENST00000477596 EXOSC9Q06265 439 aaKnown RBP28.85■■■□□ 2.21
SF1-214ENST00000477596 CCDC30Q5VVM6 783 aa28.85■■■□□ 2.21
SF1-214ENST00000477596 ZNF428Q96B54 188 aa28.84■■■□□ 2.21
SF1-214ENST00000477596 IBTKQ9P2D0 1353 aaPredicted RBP28.84■■■□□ 2.21
SF1-214ENST00000477596 CACNA1SQ13698 1873 aa28.83■■■□□ 2.21
SF1-214ENST00000477596 NTSR2O95665 410 aa28.83■■■□□ 2.21
SF1-214ENST00000477596 ERFEQ4G0M1 354 aa28.83■■■□□ 2.21
SF1-214ENST00000477596 PLBD2Q8NHP8 589 aa28.83■■■□□ 2.21
SF1-214ENST00000477596 GTF2E1P29083 439 aaPredicted RBP28.82■■■□□ 2.2
SF1-214ENST00000477596 GOLGA2Q08379 1002 aa28.82■■■□□ 2.2
SF1-214ENST00000477596 ANKRD13DQ6ZTN6 518 aa28.82■■■□□ 2.2
SF1-214ENST00000477596 ZNF622Q969S3 477 aaKnown RBP eCLIP28.82■■■□□ 2.22e-17■□□□□ 10.4
SF1-214ENST00000477596 NYXQ9GZU5 481 aa28.82■■■□□ 2.2
SF1-214ENST00000477596 TCIRG1Q13488 830 aa28.81■■■□□ 2.2
SF1-214ENST00000477596 MYH16Q9H6N6 1097 aa28.81■■■□□ 2.2
SF1-214ENST00000477596 SRGNP10124 158 aa28.8■■■□□ 2.2
SF1-214ENST00000477596 PARP10Q53GL7 1025 aa28.8■■■□□ 2.2
SF1-214ENST00000477596 HSP90AB3PQ58FF7 597 aa28.8■■■□□ 2.2
SF1-214ENST00000477596 NLRP10Q86W26 655 aa28.8■■■□□ 2.2
SF1-214ENST00000477596 ARHGAP27Q6ZUM4 889 aa28.79■■■□□ 2.2
SF1-214ENST00000477596 TTLL6Q8N841 843 aa28.79■■■□□ 2.2
SF1-214ENST00000477596 VAMP4O75379 141 aa28.78■■■□□ 2.2
SF1-214ENST00000477596 KLRG2A4D1S0 409 aaPredicted RBP28.77■■■□□ 2.2
SF1-214ENST00000477596 ATP5J2-PTCD1G3V325 749 aa28.77■■■□□ 2.2
SF1-214ENST00000477596 G2E3Q7L622 706 aa28.77■■■□□ 2.2
SF1-214ENST00000477596 PPP1R42Q7Z4L9 355 aa28.77■■■□□ 2.2
SF1-214ENST00000477596 UTP14AQ9BVJ6 771 aaKnown RBP28.77■■■□□ 2.2
SF1-214ENST00000477596 STK31Q9BXU1 1019 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms