RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 NEUROD2Q15784 382 aa20.62■□□□□ 0.89
CLDN11-204ENST00000477531 TPTE2Q6XPS3 522 aa20.62■□□□□ 0.89
CLDN11-204ENST00000477531 KIF6Q6ZMV9 814 aa20.62■□□□□ 0.89
CLDN11-204ENST00000477531 CCDC146Q8IYE0 955 aa20.62■□□□□ 0.89
CLDN11-204ENST00000477531 CNKSR1Q969H4 720 aa20.61■□□□□ 0.89
CLDN11-204ENST00000477531 RUNDC1Q96C34 613 aa20.61■□□□□ 0.89
CLDN11-204ENST00000477531 PRKRIP1Q9H875 184 aaPredicted RBP20.61■□□□□ 0.89
CLDN11-204ENST00000477531 KDM3BQ7LBC6 1761 aa20.61■□□□□ 0.89
CLDN11-204ENST00000477531 KDM2BQ8NHM5 1336 aa20.6■□□□□ 0.89
CLDN11-204ENST00000477531 BCORQ6W2J9 1755 aa20.6■□□□□ 0.89
CLDN11-204ENST00000477531 KIF3CO14782 793 aa20.6■□□□□ 0.89
CLDN11-204ENST00000477531 LMNB1P20700 586 aa20.6■□□□□ 0.89
CLDN11-204ENST00000477531 GTF2E1P29083 439 aaPredicted RBP20.6■□□□□ 0.89
CLDN11-204ENST00000477531 ERVV-1B6SEH8 477 aa20.59■□□□□ 0.89
CLDN11-204ENST00000477531 MYL6BP14649 208 aa20.59■□□□□ 0.89
CLDN11-204ENST00000477531 STYK1Q6J9G0 422 aa20.59■□□□□ 0.89
CLDN11-204ENST00000477531 MASTLQ96GX5 879 aa20.59■□□□□ 0.89
CLDN11-204ENST00000477531 ERBB4Q15303 1308 aa20.58■□□□□ 0.89
CLDN11-204ENST00000477531 FAM177BA6PVY3 158 aa20.58■□□□□ 0.89
CLDN11-204ENST00000477531 RASSF7Q02833 373 aa20.58■□□□□ 0.89
CLDN11-204ENST00000477531 C16orf71Q8IYS4 520 aaPredicted RBP20.58■□□□□ 0.89
CLDN11-204ENST00000477531 ADAMTS8Q9UP79 889 aa20.58■□□□□ 0.89
CLDN11-204ENST00000477531 LAMB4A4D0S4 1761 aa20.58■□□□□ 0.89
CLDN11-204ENST00000477531 DLEC1Q9Y238 1755 aa20.58■□□□□ 0.89
CLDN11-204ENST00000477531 MAP3K15Q6ZN16 1313 aa20.57■□□□□ 0.88
CLDN11-204ENST00000477531 ZC3H4Q9UPT8 1303 aaKnown RBP20.57■□□□□ 0.88
CLDN11-204ENST00000477531 C21orf2O43822 256 aa20.57■□□□□ 0.88
CLDN11-204ENST00000477531 SRGNP10124 158 aa20.57■□□□□ 0.88
CLDN11-204ENST00000477531 EIF2S2P20042 333 aaKnown RBP20.57■□□□□ 0.88
CLDN11-204ENST00000477531 HLFQ16534 295 aa20.57■□□□□ 0.88
CLDN11-204ENST00000477531 NYXQ9GZU5 481 aa20.57■□□□□ 0.88
CLDN11-204ENST00000477531 ZNF219Q9P2Y4 722 aaPredicted RBP20.57■□□□□ 0.88
CLDN11-204ENST00000477531 SOGA3Q5TF21 947 aa20.56■□□□□ 0.88
CLDN11-204ENST00000477531 ANKRD31Q8N7Z5 1873 aa20.56■□□□□ 0.88
CLDN11-204ENST00000477531 TOMM70O94826 608 aa20.55■□□□□ 0.88
CLDN11-204ENST00000477531 TTLL7Q6ZT98 887 aa20.55■□□□□ 0.88
CLDN11-204ENST00000477531 NMRK2Q9NPI5 230 aa20.55■□□□□ 0.88
CLDN11-204ENST00000477531 LAS1LQ9Y4W2 734 aaKnown RBP20.55■□□□□ 0.88
CLDN11-204ENST00000477531 NPR1P16066 1061 aa20.54■□□□□ 0.88
CLDN11-204ENST00000477531 PRPF40BQ6NWY9 871 aaKnown RBP20.54■□□□□ 0.88
CLDN11-204ENST00000477531 NFKBIEO00221 500 aa20.53■□□□□ 0.88
CLDN11-204ENST00000477531 HSPA6P17066 643 aa20.53■□□□□ 0.88
CLDN11-204ENST00000477531 ZBTB3Q9H5J0 574 aa20.53■□□□□ 0.88
CLDN11-204ENST00000477531 SBF1O95248 1867 aa20.52■□□□□ 0.88
CLDN11-204ENST00000477531 KLRG2A4D1S0 409 aaPredicted RBP20.51■□□□□ 0.87
CLDN11-204ENST00000477531 CHL1O00533 1208 aa20.51■□□□□ 0.87
CLDN11-204ENST00000477531 ALDH1B1P30837 517 aa20.51■□□□□ 0.87
CLDN11-204ENST00000477531 TAOK3Q9H2K8 898 aa20.51■□□□□ 0.87
CLDN11-204ENST00000477531 RRAGCQ9HB90 399 aa20.51■□□□□ 0.87
CLDN11-204ENST00000477531 TRIM35Q9UPQ4 493 aa20.51■□□□□ 0.87
CLDN11-204ENST00000477531 GPTP24298 496 aa20.5■□□□□ 0.87
CLDN11-204ENST00000477531 COL11A2P13942 1736 aaPredicted RBP20.5■□□□□ 0.87
CLDN11-204ENST00000477531 GLTPD2A6NH11 291 aa20.49■□□□□ 0.87
CLDN11-204ENST00000477531 ERFEQ4G0M1 354 aa20.49■□□□□ 0.87
CLDN11-204ENST00000477531 DPY19L2Q6NUT2 758 aa20.49■□□□□ 0.87
CLDN11-204ENST00000477531 GIGYF2Q6Y7W6 1299 aaKnown RBP20.49■□□□□ 0.87
CLDN11-204ENST00000477531 PPP1R42Q7Z4L9 355 aa20.49■□□□□ 0.87
CLDN11-204ENST00000477531 RBM46Q8TBY0 533 aaKnown RBP20.49■□□□□ 0.87
CLDN11-204ENST00000477531 NECTIN2Q92692 538 aa20.49■□□□□ 0.87
CLDN11-204ENST00000477531 PRELPP51888 382 aa20.48■□□□□ 0.87
CLDN11-204ENST00000477531 CCDC93Q567U6 631 aa20.48■□□□□ 0.87
CLDN11-204ENST00000477531 NUTM1Q86Y26 1132 aa20.48■□□□□ 0.87
CLDN11-204ENST00000477531 LTBP3Q9NS15 1303 aa20.48■□□□□ 0.87
CLDN11-204ENST00000477531 CALD1Q05682 793 aaKnown RBP20.47■□□□□ 0.87
CLDN11-204ENST00000477531 PDIA6Q15084 440 aa20.47■□□□□ 0.87
CLDN11-204ENST00000477531 PARP10Q53GL7 1025 aa20.47■□□□□ 0.87
CLDN11-204ENST00000477531 ZNF34Q8IZ26 560 aa20.47■□□□□ 0.87
CLDN11-204ENST00000477531 CFAP44Q96MT7 982 aa20.47■□□□□ 0.87
CLDN11-204ENST00000477531 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
CLDN11-204ENST00000477531 NUP98P52948 1817 aa20.46■□□□□ 0.87
CLDN11-204ENST00000477531 APAF1O14727 1248 aa20.46■□□□□ 0.87
CLDN11-204ENST00000477531 ANXA1P04083 346 aa20.46■□□□□ 0.87
CLDN11-204ENST00000477531 AIMP1Q12904 312 aaKnown RBP20.46■□□□□ 0.87
CLDN11-204ENST00000477531 HSP90AB3PQ58FF7 597 aa20.46■□□□□ 0.87
CLDN11-204ENST00000477531 SUSD4Q5VX71 490 aa20.46■□□□□ 0.87
CLDN11-204ENST00000477531 RPGRQ92834 1020 aaKnown RBP20.46■□□□□ 0.87
CLDN11-204ENST00000477531 DDX21Q9NR30 783 aaKnown RBP eCLIP20.46■□□□□ 0.87
CLDN11-204ENST00000477531 SLX4Q8IY92 1834 aa20.46■□□□□ 0.87
CLDN11-204ENST00000477531 HOXB7P09629 217 aa20.45■□□□□ 0.86
CLDN11-204ENST00000477531 VEGFAP15692 232 aaPredicted RBP20.45■□□□□ 0.86
CLDN11-204ENST00000477531 PROSER3Q2NL68 480 aa20.45■□□□□ 0.86
CLDN11-204ENST00000477531 COPS6Q7L5N1 327 aa20.45■□□□□ 0.86
CLDN11-204ENST00000477531 RTKN2Q8IZC4 609 aa20.45■□□□□ 0.86
CLDN11-204ENST00000477531 CEP350Q5VT06 3117 aa20.45■□□□□ 0.86
CLDN11-204ENST00000477531 UBN2Q6ZU65 1347 aa20.45■□□□□ 0.86
CLDN11-204ENST00000477531 CCDC88AQ3V6T2 1871 aa20.44■□□□□ 0.86
CLDN11-204ENST00000477531 APLP1P51693 650 aa20.44■□□□□ 0.86
CLDN11-204ENST00000477531 FSTL1Q12841 308 aa20.44■□□□□ 0.86
CLDN11-204ENST00000477531 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
CLDN11-204ENST00000477531 LRP10Q7Z4F1 713 aa20.44■□□□□ 0.86
CLDN11-204ENST00000477531 XAGE3Q8WTP9 111 aa20.44■□□□□ 0.86
CLDN11-204ENST00000477531 C7orf43Q8WVR3 580 aa20.44■□□□□ 0.86
CLDN11-204ENST00000477531 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
CLDN11-204ENST00000477531 UTP14AQ9BVJ6 771 aaKnown RBP20.43■□□□□ 0.86
CLDN11-204ENST00000477531 ABCC12Q96J65 1359 aa20.43■□□□□ 0.86
CLDN11-204ENST00000477531 CACNA1SQ13698 1873 aa20.43■□□□□ 0.86
CLDN11-204ENST00000477531 FER1L6Q2WGJ9 1857 aa20.43■□□□□ 0.86
CLDN11-204ENST00000477531 TNRC6CQ9HCJ0 1690 aaKnown RBP20.42■□□□□ 0.86
CLDN11-204ENST00000477531 NTSR2O95665 410 aa20.42■□□□□ 0.86
CLDN11-204ENST00000477531 GNAI1P63096 354 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms