RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 USP17L17D6RBQ6 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L19D6RCP7 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L20D6RJB6 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 USP17L24Q0WX57 530 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 RHPN1Q8TCX5 695 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 LRRC4BQ9NT99 713 aa9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 GPC6Q9Y625 555 aaPredicted RBP9.5□□□□□ -0.89
CDKN1B-204ENST00000477087 EML1O00423 815 aa9.49□□□□□ -0.89
CDKN1B-204ENST00000477087 OIP5O43482 229 aa9.49□□□□□ -0.89
CDKN1B-204ENST00000477087 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
CDKN1B-204ENST00000477087 DKK1O94907 266 aa9.49□□□□□ -0.89
CDKN1B-204ENST00000477087 MAPTP10636 758 aaKnown RBP9.49□□□□□ -0.89
CDKN1B-204ENST00000477087 CTBSQ01459 385 aa9.49□□□□□ -0.89
CDKN1B-204ENST00000477087 CRTC2Q53ET0 693 aaPredicted RBP9.49□□□□□ -0.89
CDKN1B-204ENST00000477087 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
CDKN1B-204ENST00000477087 GOLGA6L1Q8N7Z2 621 aa9.49□□□□□ -0.89
CDKN1B-204ENST00000477087 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
CDKN1B-204ENST00000477087 FAM157BP0CG42 384 aa9.48□□□□□ -0.89
CDKN1B-204ENST00000477087 TNP2Q05952 138 aa9.48□□□□□ -0.89
CDKN1B-204ENST00000477087 DPYDQ12882 1025 aa9.48□□□□□ -0.89
CDKN1B-204ENST00000477087 PTK7Q13308 1070 aa9.48□□□□□ -0.89
CDKN1B-204ENST00000477087 SH3PXD2AQ5TCZ1 1133 aa9.48□□□□□ -0.89
CDKN1B-204ENST00000477087 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
CDKN1B-204ENST00000477087 PODNQ7Z5L7 613 aa9.48□□□□□ -0.89
CDKN1B-204ENST00000477087 HINFPQ9BQA5 517 aa9.48□□□□□ -0.89
CDKN1B-204ENST00000477087 LRRC69Q6ZNQ3 347 aa9.47□□□□□ -0.89
CDKN1B-204ENST00000477087 ANKMY2Q8IV38 441 aa9.47□□□□□ -0.89
CDKN1B-204ENST00000477087 SCG3Q8WXD2 468 aaKnown RBP9.47□□□□□ -0.89
CDKN1B-204ENST00000477087 HCN4Q9Y3Q4 1203 aa9.47□□□□□ -0.89
CDKN1B-204ENST00000477087 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
CDKN1B-204ENST00000477087 C2CD2LO14523 706 aa9.46□□□□□ -0.9
CDKN1B-204ENST00000477087 CD33P20138 364 aa9.46□□□□□ -0.9
CDKN1B-204ENST00000477087 CFAP70Q5T0N1 1121 aa9.46□□□□□ -0.9
CDKN1B-204ENST00000477087 C1orf53Q5VUE5 145 aa9.46□□□□□ -0.9
CDKN1B-204ENST00000477087 GALNT6Q8NCL4 622 aa9.46□□□□□ -0.9
CDKN1B-204ENST00000477087 GAS2L2Q8NHY3 880 aa9.46□□□□□ -0.9
CDKN1B-204ENST00000477087 CHMP7Q8WUX9 453 aaPredicted RBP9.46□□□□□ -0.9
CDKN1B-204ENST00000477087 PHACTR1Q9C0D0 580 aa9.46□□□□□ -0.9
CDKN1B-204ENST00000477087 PHF20L1A8MW92 1017 aa9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 ARAFP10398 606 aa9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 RFX1P22670 979 aa9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 IRS1P35568 1242 aa9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 HIRAP54198 1017 aaPredicted RBP9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 RASSF7Q02833 373 aa9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 FAM182BQ5T319 152 aa9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 EDARADDQ8WWZ3 215 aa9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 ZMYND15Q9H091 742 aa9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 MARK1Q9P0L2 795 aa9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 GGA1Q9UJY5 639 aa9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
CDKN1B-204ENST00000477087 LAMC2Q13753 1193 aa9.44□□□□□ -0.9
CDKN1B-204ENST00000477087 KANK3Q6NY19 840 aa9.44□□□□□ -0.9
CDKN1B-204ENST00000477087 STAG2Q8N3U4 1231 aa9.44□□□□□ -0.9
CDKN1B-204ENST00000477087 TMEM151AQ8N4L1 468 aa9.44□□□□□ -0.9
CDKN1B-204ENST00000477087 BEND7Q8N7W2 519 aaPredicted RBP9.44□□□□□ -0.9
CDKN1B-204ENST00000477087 ANKIB1Q9P2G1 1089 aa9.44□□□□□ -0.9
CDKN1B-204ENST00000477087 PRR12Q9ULL5 1215 aa9.44□□□□□ -0.9
CDKN1B-204ENST00000477087 WRNQ14191 1432 aaPredicted RBP eCLIP9.44□□□□□ -0.9
CDKN1B-204ENST00000477087 C21orf2O43822 256 aa9.43□□□□□ -0.9
CDKN1B-204ENST00000477087 GDF11O95390 407 aa9.43□□□□□ -0.9
CDKN1B-204ENST00000477087 AMPD1P23109 780 aa9.43□□□□□ -0.9
CDKN1B-204ENST00000477087 SLCO4C1Q6ZQN7 724 aa9.43□□□□□ -0.9
CDKN1B-204ENST00000477087 GTF3C3Q9Y5Q9 886 aa9.43□□□□□ -0.9
CDKN1B-204ENST00000477087 CNTNAP5Q8WYK1 1306 aa9.42□□□□□ -0.9
CDKN1B-204ENST00000477087 CDCA8Q53HL2 280 aa9.42□□□□□ -0.9
CDKN1B-204ENST00000477087 POTEAQ6S8J7 498 aa9.42□□□□□ -0.9
CDKN1B-204ENST00000477087 NGLY1Q96IV0 654 aa9.42□□□□□ -0.9
CDKN1B-204ENST00000477087 C2orf49Q9BVC5 232 aaPredicted RBP9.42□□□□□ -0.9
CDKN1B-204ENST00000477087 RRAGCQ9HB90 399 aa9.42□□□□□ -0.9
CDKN1B-204ENST00000477087 NEURL1BA8MQ27 555 aa9.41□□□□□ -0.9
CDKN1B-204ENST00000477087 SHISA8B8ZZ34 492 aa9.41□□□□□ -0.9
CDKN1B-204ENST00000477087 EFSO43281 561 aa9.41□□□□□ -0.9
CDKN1B-204ENST00000477087 LGR5O75473 907 aa9.41□□□□□ -0.9
CDKN1B-204ENST00000477087 ADH6P28332 368 aa9.41□□□□□ -0.9
CDKN1B-204ENST00000477087 HIF1AQ16665 826 aa9.41□□□□□ -0.9
CDKN1B-204ENST00000477087 C1orf229Q6ZS94 237 aaPredicted RBP9.41□□□□□ -0.9
CDKN1B-204ENST00000477087 ALDH16A1Q8IZ83 802 aa9.41□□□□□ -0.9
CDKN1B-204ENST00000477087 FAM200AQ8TCP9 573 aa9.41□□□□□ -0.9
CDKN1B-204ENST00000477087 AVENQ9NQS1 362 aaPredicted RBP9.41□□□□□ -0.9
CDKN1B-204ENST00000477087 IGFBP4P22692 258 aa9.4□□□□□ -0.9
CDKN1B-204ENST00000477087 GSK3AP49840 483 aa9.4□□□□□ -0.9
CDKN1B-204ENST00000477087 HSH2DQ96JZ2 352 aa9.4□□□□□ -0.9
CDKN1B-204ENST00000477087 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
CDKN1B-204ENST00000477087 STRN4Q9NRL3 753 aa9.4□□□□□ -0.9
CDKN1B-204ENST00000477087 EEA1Q15075 1411 aa9.39□□□□□ -0.91
CDKN1B-204ENST00000477087 C7orf43Q8WVR3 580 aa9.39□□□□□ -0.91
CDKN1B-204ENST00000477087 SUSD3Q96L08 255 aa9.39□□□□□ -0.91
CDKN1B-204ENST00000477087 ARXQ96QS3 562 aa9.39□□□□□ -0.91
CDKN1B-204ENST00000477087 PDS5BQ9NTI5 1447 aa9.39□□□□□ -0.91
CDKN1B-204ENST00000477087 LAMC3Q9Y6N6 1575 aa9.38□□□□□ -0.91
CDKN1B-204ENST00000477087 EPXP11678 715 aa9.38□□□□□ -0.91
CDKN1B-204ENST00000477087 ZNF468Q5VIY5 522 aaPredicted RBP9.38□□□□□ -0.91
CDKN1B-204ENST00000477087 VTI1AQ96AJ9 217 aa9.38□□□□□ -0.91
CDKN1B-204ENST00000477087 BRD7Q9NPI1 651 aa9.38□□□□□ -0.91
CDKN1B-204ENST00000477087 HCN2Q9UL51 889 aa9.38□□□□□ -0.91
CDKN1B-204ENST00000477087 MKL2Q9ULH7 1088 aa9.38□□□□□ -0.91
CDKN1B-204ENST00000477087 NOVA2Q9UNW9 492 aaKnown RBP9.38□□□□□ -0.91
CDKN1B-204ENST00000477087 PCBP4P57723 403 aaKnown RBP9.37□□□□□ -0.91
CDKN1B-204ENST00000477087 KCTD17Q8N5Z5 321 aa9.37□□□□□ -0.91
CDKN1B-204ENST00000477087 CCDC97Q96F63 343 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1550.7 ms