RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 CCDC24Q8N4L8 307 aa23.42■■□□□ 1.34
RAPGEF3-208ENST00000476259 CNBD1Q8NA66 436 aa23.42■■□□□ 1.34
RAPGEF3-208ENST00000476259 RGL2O15211 777 aa23.41■■□□□ 1.34
RAPGEF3-208ENST00000476259 BRIP1Q9BX63 1249 aa23.41■■□□□ 1.34
RAPGEF3-208ENST00000476259 LAS1LQ9Y4W2 734 aaKnown RBP23.41■■□□□ 1.34
RAPGEF3-208ENST00000476259 ARFGEF2Q9Y6D5 1785 aa23.4■■□□□ 1.34
RAPGEF3-208ENST00000476259 ERBB4Q15303 1308 aa23.4■■□□□ 1.34
RAPGEF3-208ENST00000476259 PDE6BP35913 854 aa23.4■■□□□ 1.34
RAPGEF3-208ENST00000476259 ST5P78524 1137 aa23.4■■□□□ 1.34
RAPGEF3-208ENST00000476259 HLFQ16534 295 aa23.4■■□□□ 1.34
RAPGEF3-208ENST00000476259 CCDC88AQ3V6T2 1871 aa23.39■■□□□ 1.34
RAPGEF3-208ENST00000476259 CCDC184Q52MB2 194 aa23.39■■□□□ 1.33
RAPGEF3-208ENST00000476259 NIP7Q9Y221 180 aaKnown RBP eCLIP23.39■■□□□ 1.33
RAPGEF3-208ENST00000476259 CHL1O00533 1208 aa23.38■■□□□ 1.33
RAPGEF3-208ENST00000476259 APAF1O14727 1248 aa23.38■■□□□ 1.33
RAPGEF3-208ENST00000476259 EIF2S2P20042 333 aaKnown RBP23.38■■□□□ 1.33
RAPGEF3-208ENST00000476259 KIF6Q6ZMV9 814 aa23.38■■□□□ 1.33
RAPGEF3-208ENST00000476259 NBPF5PQ86XG9 351 aaPredicted RBP23.38■■□□□ 1.33
RAPGEF3-208ENST00000476259 TTLL6Q8N841 843 aa23.38■■□□□ 1.33
RAPGEF3-208ENST00000476259 PDZRN3Q9UPQ7 1066 aa23.38■■□□□ 1.33
RAPGEF3-208ENST00000476259 MAP3K15Q6ZN16 1313 aa23.37■■□□□ 1.33
RAPGEF3-208ENST00000476259 TTLL7Q6ZT98 887 aa23.37■■□□□ 1.33
RAPGEF3-208ENST00000476259 ZNF526Q8TF50 670 aaPredicted RBP23.37■■□□□ 1.33
RAPGEF3-208ENST00000476259 ERVV-1B6SEH8 477 aa23.36■■□□□ 1.33
RAPGEF3-208ENST00000476259 GPBP1L1Q9HC44 474 aaPredicted RBP23.36■■□□□ 1.33
RAPGEF3-208ENST00000476259 ANKRD36CQ5JPF3 1778 aa23.36■■□□□ 1.33
RAPGEF3-208ENST00000476259 ANP32CO43423 234 aa23.35■■□□□ 1.33
RAPGEF3-208ENST00000476259 ZNF622Q969S3 477 aaKnown RBP eCLIP23.35■■□□□ 1.33
RAPGEF3-208ENST00000476259 SLX4Q8IY92 1834 aa23.34■■□□□ 1.33
RAPGEF3-208ENST00000476259 FAM177BA6PVY3 158 aa23.34■■□□□ 1.33
RAPGEF3-208ENST00000476259 PDIA6Q15084 440 aa23.34■■□□□ 1.33
RAPGEF3-208ENST00000476259 KRT24Q2M2I5 525 aa23.34■■□□□ 1.33
RAPGEF3-208ENST00000476259 TPTE2Q6XPS3 522 aa23.34■■□□□ 1.33
RAPGEF3-208ENST00000476259 ZBTB3Q9H5J0 574 aa23.34■■□□□ 1.33
RAPGEF3-208ENST00000476259 FER1L6Q2WGJ9 1857 aa23.33■■□□□ 1.33
RAPGEF3-208ENST00000476259 TNRC6CQ9HCJ0 1690 aaKnown RBP23.33■■□□□ 1.33
RAPGEF3-208ENST00000476259 NECTIN2Q92692 538 aa23.33■■□□□ 1.33
RAPGEF3-208ENST00000476259 CFAP44Q96MT7 982 aa23.33■■□□□ 1.33
RAPGEF3-208ENST00000476259 ANXA1P04083 346 aa23.32■■□□□ 1.32
RAPGEF3-208ENST00000476259 PROSER3Q2NL68 480 aa23.32■■□□□ 1.32
RAPGEF3-208ENST00000476259 C9orf131Q5VYM1 1079 aa23.32■■□□□ 1.32
RAPGEF3-208ENST00000476259 LRP10Q7Z4F1 713 aa23.32■■□□□ 1.32
RAPGEF3-208ENST00000476259 TIAM2Q8IVF5 1701 aa23.31■■□□□ 1.32
RAPGEF3-208ENST00000476259 C1QTNF8P60827 252 aa23.31■■□□□ 1.32
RAPGEF3-208ENST00000476259 SRGNP10124 158 aa23.3■■□□□ 1.32
RAPGEF3-208ENST00000476259 RASSF7Q02833 373 aa23.3■■□□□ 1.32
RAPGEF3-208ENST00000476259 MRS2Q9HD23 443 aa23.3■■□□□ 1.32
RAPGEF3-208ENST00000476259 MBIPQ9NS73 344 aa23.3■■□□□ 1.32
RAPGEF3-208ENST00000476259 RNF181Q9P0P0 153 aa23.3■■□□□ 1.32
RAPGEF3-208ENST00000476259 GPTP24298 496 aa23.29■■□□□ 1.32
RAPGEF3-208ENST00000476259 GTF2E1P29083 439 aaPredicted RBP23.29■■□□□ 1.32
RAPGEF3-208ENST00000476259 CALD1Q05682 793 aaKnown RBP23.29■■□□□ 1.32
RAPGEF3-208ENST00000476259 STYK1Q6J9G0 422 aa23.29■■□□□ 1.32
RAPGEF3-208ENST00000476259 GIGYF2Q6Y7W6 1299 aaKnown RBP23.29■■□□□ 1.32
RAPGEF3-208ENST00000476259 MASTLQ96GX5 879 aa23.29■■□□□ 1.32
RAPGEF3-208ENST00000476259 NYXQ9GZU5 481 aa23.29■■□□□ 1.32
RAPGEF3-208ENST00000476259 DICER1Q9UPY3 1922 aaKnown RBP23.29■■□□□ 1.32
RAPGEF3-208ENST00000476259 CNKSR1Q969H4 720 aa23.28■■□□□ 1.32
RAPGEF3-208ENST00000476259 ZNF219Q9P2Y4 722 aaPredicted RBP23.28■■□□□ 1.32
RAPGEF3-208ENST00000476259 UBN2Q6ZU65 1347 aa23.28■■□□□ 1.32
RAPGEF3-208ENST00000476259 C21orf2O43822 256 aa23.27■■□□□ 1.32
RAPGEF3-208ENST00000476259 HOXB7P09629 217 aa23.27■■□□□ 1.32
RAPGEF3-208ENST00000476259 ZNF853P0CG23 659 aa23.27■■□□□ 1.32
RAPGEF3-208ENST00000476259 GNAI1P63096 354 aa23.27■■□□□ 1.32
RAPGEF3-208ENST00000476259 HDGFL1Q5TGJ6 251 aa23.27■■□□□ 1.32
RAPGEF3-208ENST00000476259 DDX21Q9NR30 783 aaKnown RBP eCLIP23.27■■□□□ 1.32
RAPGEF3-208ENST00000476259 IFT57Q9NWB7 429 aa23.27■■□□□ 1.32
RAPGEF3-208ENST00000476259 ZNF34Q8IZ26 560 aa23.26■■□□□ 1.31
RAPGEF3-208ENST00000476259 ABCC12Q96J65 1359 aa23.26■■□□□ 1.31
RAPGEF3-208ENST00000476259 IBTKQ9P2D0 1353 aaPredicted RBP23.26■■□□□ 1.31
RAPGEF3-208ENST00000476259 KLRG2A4D1S0 409 aaPredicted RBP23.25■■□□□ 1.31
RAPGEF3-208ENST00000476259 AIMP1Q12904 312 aaKnown RBP23.25■■□□□ 1.31
RAPGEF3-208ENST00000476259 DUSP27Q5VZP5 1158 aa23.25■■□□□ 1.31
RAPGEF3-208ENST00000476259 PRPF40BQ6NWY9 871 aaKnown RBP23.25■■□□□ 1.31
RAPGEF3-208ENST00000476259 COPS6Q7L5N1 327 aa23.25■■□□□ 1.31
RAPGEF3-208ENST00000476259 NUTM1Q86Y26 1132 aa23.25■■□□□ 1.31
RAPGEF3-208ENST00000476259 XAGE3Q8WTP9 111 aa23.25■■□□□ 1.31
RAPGEF3-208ENST00000476259 CHPF2Q9P2E5 772 aa23.25■■□□□ 1.31
RAPGEF3-208ENST00000476259 NFKBIEO00221 500 aa23.24■■□□□ 1.31
RAPGEF3-208ENST00000476259 NPR1P16066 1061 aa23.24■■□□□ 1.31
RAPGEF3-208ENST00000476259 SUSD4Q5VX71 490 aa23.24■■□□□ 1.31
RAPGEF3-208ENST00000476259 SENP3-EIF4A1A0A087X0R7 540 aa23.23■■□□□ 1.31
RAPGEF3-208ENST00000476259 LMNB1P20700 586 aa23.23■■□□□ 1.31
RAPGEF3-208ENST00000476259 ERFEQ4G0M1 354 aa23.23■■□□□ 1.31
RAPGEF3-208ENST00000476259 RIC1Q4ADV7 1423 aa23.23■■□□□ 1.31
RAPGEF3-208ENST00000476259 LAMB2P55268 1798 aa23.22■■□□□ 1.31
RAPGEF3-208ENST00000476259 PRELPP51888 382 aa23.22■■□□□ 1.31
RAPGEF3-208ENST00000476259 PARP10Q53GL7 1025 aa23.22■■□□□ 1.31
RAPGEF3-208ENST00000476259 DBF4Q9UBU7 674 aaPredicted RBP23.22■■□□□ 1.31
RAPGEF3-208ENST00000476259 KIF3CO14782 793 aa23.21■■□□□ 1.31
RAPGEF3-208ENST00000476259 NTSR2O95665 410 aa23.21■■□□□ 1.31
RAPGEF3-208ENST00000476259 PPP1R42Q7Z4L9 355 aa23.21■■□□□ 1.31
RAPGEF3-208ENST00000476259 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
RAPGEF3-208ENST00000476259 ZC3H4Q9UPT8 1303 aaKnown RBP23.19■■□□□ 1.3
RAPGEF3-208ENST00000476259 ELL2O00472 640 aaPredicted RBP23.19■■□□□ 1.3
RAPGEF3-208ENST00000476259 CCDC27Q2M243 656 aa23.19■■□□□ 1.3
RAPGEF3-208ENST00000476259 HSP90AB3PQ58FF7 597 aa23.19■■□□□ 1.3
RAPGEF3-208ENST00000476259 KDM2BQ8NHM5 1336 aa23.18■■□□□ 1.3
RAPGEF3-208ENST00000476259 ALDH1B1P30837 517 aa23.18■■□□□ 1.3
RAPGEF3-208ENST00000476259 CRY2Q49AN0 593 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms