RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 MCCP23508 829 aa19.45■□□□□ 0.7
VARS2-207ENST00000476162 LARP1Q6PKG0 1096 aaKnown RBP19.45■□□□□ 0.7
VARS2-207ENST00000476162 COPS6Q7L5N1 327 aa19.45■□□□□ 0.7
VARS2-207ENST00000476162 SNRPA1P09661 255 aaKnown RBP19.44■□□□□ 0.7
VARS2-207ENST00000476162 NEK4P51957 841 aa19.44■□□□□ 0.7
VARS2-207ENST00000476162 CLASRPQ8N2M8 674 aaKnown RBP19.44■□□□□ 0.7
VARS2-207ENST00000476162 BICC1Q9H694 974 aaKnown RBP19.44■□□□□ 0.7
VARS2-207ENST00000476162 C5P01031 1676 aa19.44■□□□□ 0.7
VARS2-207ENST00000476162 PLEKHG2Q9H7P9 1386 aa19.43■□□□□ 0.7
VARS2-207ENST00000476162 XRCC6P12956 609 aaKnown RBP eCLIP19.43■□□□□ 0.7
VARS2-207ENST00000476162 PIP4K2AP48426 406 aaPredicted RBP19.43■□□□□ 0.7
VARS2-207ENST00000476162 CABP4P57796 275 aa19.43■□□□□ 0.7
VARS2-207ENST00000476162 USP42Q9H9J4 1324 aaKnown RBP19.43■□□□□ 0.7
VARS2-207ENST00000476162 NEXNQ0ZGT2 675 aa19.43■□□□□ 0.7
VARS2-207ENST00000476162 CNTROBQ8N137 903 aa19.43■□□□□ 0.7
VARS2-207ENST00000476162 FMNL2Q96PY5 1086 aa19.43■□□□□ 0.7
VARS2-207ENST00000476162 TTC41PQ6P2S7 1318 aa19.42■□□□□ 0.7
VARS2-207ENST00000476162 NEURL1BA8MQ27 555 aa19.42■□□□□ 0.7
VARS2-207ENST00000476162 ANAPC15P60006 121 aa19.42■□□□□ 0.7
VARS2-207ENST00000476162 LRP10Q7Z4F1 713 aa19.42■□□□□ 0.7
VARS2-207ENST00000476162 PRDM11Q9NQV5 511 aa19.42■□□□□ 0.7
VARS2-207ENST00000476162 MRC1P22897 1456 aa19.42■□□□□ 0.7
VARS2-207ENST00000476162 XIRP1Q702N8 1843 aaKnown RBP19.42■□□□□ 0.7
VARS2-207ENST00000476162 ERC1Q8IUD2 1116 aa19.41■□□□□ 0.7
VARS2-207ENST00000476162 ZGPATQ8N5A5 531 aaKnown RBP19.41■□□□□ 0.7
VARS2-207ENST00000476162 MYD88Q99836 296 aa19.41■□□□□ 0.7
VARS2-207ENST00000476162 GLRX3O76003 335 aaKnown RBP19.41■□□□□ 0.7
VARS2-207ENST00000476162 METTL22Q9BUU2 404 aaPredicted RBP19.41■□□□□ 0.7
VARS2-207ENST00000476162 GCKRQ14397 625 aa19.4■□□□□ 0.7
VARS2-207ENST00000476162 ANKRD13DQ6ZTN6 518 aa19.4■□□□□ 0.7
VARS2-207ENST00000476162 CWC22Q9HCG8 908 aaKnown RBP19.4■□□□□ 0.7
VARS2-207ENST00000476162 FSD2A1L4K1 749 aa19.4■□□□□ 0.7
VARS2-207ENST00000476162 NUCB2P80303 420 aa19.4■□□□□ 0.7
VARS2-207ENST00000476162 SLAIN2Q9P270 581 aa19.4■□□□□ 0.7
VARS2-207ENST00000476162 PKD1L3Q7Z443 1732 aa19.39■□□□□ 0.7
VARS2-207ENST00000476162 SGSM2O43147 1006 aa19.39■□□□□ 0.69
VARS2-207ENST00000476162 IFIT2P09913 472 aaKnown RBP19.39■□□□□ 0.69
VARS2-207ENST00000476162 PKP1Q13835 747 aa19.39■□□□□ 0.69
VARS2-207ENST00000476162 CLEC17AQ6ZS10 378 aa19.39■□□□□ 0.69
VARS2-207ENST00000476162 TOM1L2Q6ZVM7 507 aa19.39■□□□□ 0.69
VARS2-207ENST00000476162 ECHDC1Q9NTX5 307 aa19.39■□□□□ 0.69
VARS2-207ENST00000476162 WDR17Q8IZU2 1322 aa19.39■□□□□ 0.69
VARS2-207ENST00000476162 SASH1O94885 1247 aa19.39■□□□□ 0.69
VARS2-207ENST00000476162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.39■□□□□ 0.69
VARS2-207ENST00000476162 SOS2Q07890 1332 aaPredicted RBP19.38■□□□□ 0.69
VARS2-207ENST00000476162 EPB41L2O43491 1005 aaKnown RBP19.38■□□□□ 0.69
VARS2-207ENST00000476162 G3BP1Q13283 466 aaKnown RBP eCLIP19.38■□□□□ 0.699e-7■■□□□ 11.6
VARS2-207ENST00000476162 AACSQ86V21 672 aa19.38■□□□□ 0.69
VARS2-207ENST00000476162 IL17RAQ96F46 866 aa19.38■□□□□ 0.69
VARS2-207ENST00000476162 TMX3Q96JJ7 454 aa19.38■□□□□ 0.69
VARS2-207ENST00000476162 BAG4O95429 457 aaKnown RBP19.37■□□□□ 0.69
VARS2-207ENST00000476162 CYP2E1P05181 493 aaPredicted RBP19.37■□□□□ 0.69
VARS2-207ENST00000476162 HSPA4P34932 840 aa19.37■□□□□ 0.69
VARS2-207ENST00000476162 MCM2P49736 904 aa19.37■□□□□ 0.69
VARS2-207ENST00000476162 ZNF335Q9H4Z2 1342 aaPredicted RBP19.37■□□□□ 0.69
VARS2-207ENST00000476162 EPHA10Q5JZY3 1008 aa19.37■□□□□ 0.69
VARS2-207ENST00000476162 CWC27Q6UX04 472 aaKnown RBP19.37■□□□□ 0.69
VARS2-207ENST00000476162 ZCRB1Q8TBF4 217 aaKnown RBP19.37■□□□□ 0.69
VARS2-207ENST00000476162 GPATCH3Q96I76 525 aa19.37■□□□□ 0.69
VARS2-207ENST00000476162 ARXQ96QS3 562 aa19.37■□□□□ 0.69
VARS2-207ENST00000476162 AK9Q5TCS8 1911 aa19.36■□□□□ 0.69
VARS2-207ENST00000476162 GOLGA6L3A6NEY3 463 aa19.36■□□□□ 0.69
VARS2-207ENST00000476162 UPF3BQ9BZI7 483 aaKnown RBP19.36■□□□□ 0.69
VARS2-207ENST00000476162 SIL1Q9H173 461 aa19.36■□□□□ 0.69
VARS2-207ENST00000476162 PTMSP20962 102 aa19.36■□□□□ 0.69
VARS2-207ENST00000476162 KLHDC4Q8TBB5 520 aa19.36■□□□□ 0.69
VARS2-207ENST00000476162 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
VARS2-207ENST00000476162 EAF2Q96CJ1 260 aaPredicted RBP19.36■□□□□ 0.69
VARS2-207ENST00000476162 RAD50Q92878 1312 aa19.35■□□□□ 0.69
VARS2-207ENST00000476162 LSG1Q9H089 658 aaKnown RBP19.35■□□□□ 0.69
VARS2-207ENST00000476162 PCDH11XQ9BZA7 1347 aa19.35■□□□□ 0.69
VARS2-207ENST00000476162 PCDH11YQ9BZA8 1340 aa19.35■□□□□ 0.69
VARS2-207ENST00000476162 GOLGA6L22H0YM25 854 aa19.35■□□□□ 0.69
VARS2-207ENST00000476162 SKOR2Q2VWA4 1001 aaPredicted RBP19.35■□□□□ 0.69
VARS2-207ENST00000476162 PDCL3Q9H2J4 239 aa19.35■□□□□ 0.69
VARS2-207ENST00000476162 NOL8Q76FK4 1167 aaKnown RBP19.34■□□□□ 0.69
VARS2-207ENST00000476162 CCDC8Q9H0W5 538 aaPredicted RBP19.34■□□□□ 0.69
VARS2-207ENST00000476162 PANK2Q9BZ23 570 aa19.33■□□□□ 0.69
VARS2-207ENST00000476162 DIAPH3Q9NSV4 1193 aa19.33■□□□□ 0.69
VARS2-207ENST00000476162 COL5A2P05997 1499 aaPredicted RBP19.33■□□□□ 0.69
VARS2-207ENST00000476162 ATP5J2-PTCD1G3V325 749 aa19.33■□□□□ 0.68
VARS2-207ENST00000476162 PTCD1O75127 700 aaKnown RBP19.33■□□□□ 0.68
VARS2-207ENST00000476162 KIAA1211Q6ZU35 1233 aa19.33■□□□□ 0.68
VARS2-207ENST00000476162 CUL4AQ13619 759 aa19.32■□□□□ 0.68
VARS2-207ENST00000476162 ZDHHC9Q9Y397 364 aa19.32■□□□□ 0.68
VARS2-207ENST00000476162 STRCQ7RTU9 1775 aa19.32■□□□□ 0.68
VARS2-207ENST00000476162 UBE3BQ7Z3V4 1068 aa19.32■□□□□ 0.68
VARS2-207ENST00000476162 TLR7Q9NYK1 1049 aaKnown RBP19.32■□□□□ 0.68
VARS2-207ENST00000476162 MCTP1Q6DN14 999 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 PLBD2Q8NHP8 589 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 EVI5LQ96CN4 794 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 STRN4Q9NRL3 753 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 PRDM4Q9UKN5 801 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 SNX14Q9Y5W7 946 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 NBPF26B4DH59 902 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 ERVV-2B6SEH9 535 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 IL2RBP14784 551 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 NBPF14Q5TI25 921 aa19.31■□□□□ 0.68
VARS2-207ENST00000476162 NBPF10Q6P3W6 841 aaKnown RBP19.31■□□□□ 0.68
VARS2-207ENST00000476162 NBPF15Q8N660 670 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms