RNA–Protein interactions for RNA: ENST00000475869.2

NBPF3-208, Transcript of NBPF member 3, human

TSL 5

Gene NBPF3, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBPF3-208	ENST00000475869	TRIM35	Q9UPQ4	493 aa		32.4	■■■□□ 2.78
NBPF3-208	ENST00000475869	PDE6B	P35913	854 aa		32.39	■■■□□ 2.78
NBPF3-208	ENST00000475869	TTLL6	Q8N841	843 aa		32.39	■■■□□ 2.78
NBPF3-208	ENST00000475869	NUP98	P52948	1817 aa		32.39	■■■□□ 2.78
NBPF3-208	ENST00000475869	PDZRN3	Q9UPQ7	1066 aa		32.38	■■■□□ 2.77
NBPF3-208	ENST00000475869	HLF	Q16534	295 aa		32.37	■■■□□ 2.77
NBPF3-208	ENST00000475869	ST5	P78524	1137 aa		32.36	■■■□□ 2.77
NBPF3-208	ENST00000475869	NGEF	Q8N5V2	710 aa		32.36	■■■□□ 2.77
NBPF3-208	ENST00000475869	ERBB4	Q15303	1308 aa		32.35	■■■□□ 2.77
NBPF3-208	ENST00000475869	NPHP1	O15259	732 aa		32.35	■■■□□ 2.77
NBPF3-208	ENST00000475869	C9orf131	Q5VYM1	1079 aa		32.35	■■■□□ 2.77
NBPF3-208	ENST00000475869	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.35	■■■□□ 2.77
NBPF3-208	ENST00000475869	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.35	■■■□□ 2.77
NBPF3-208	ENST00000475869	MYL6B	P14649	208 aa		32.34	■■■□□ 2.77
NBPF3-208	ENST00000475869	CACNA1S	Q13698	1873 aa		32.33	■■■□□ 2.77
NBPF3-208	ENST00000475869	TTLL7	Q6ZT98	887 aa		32.33	■■■□□ 2.77
NBPF3-208	ENST00000475869	ARFGEF2	Q9Y6D5	1785 aa		32.32	■■■□□ 2.77
NBPF3-208	ENST00000475869	MAP3K15	Q6ZN16	1313 aa		32.32	■■■□□ 2.76
NBPF3-208	ENST00000475869	ERVV-1	B6SEH8	477 aa		32.32	■■■□□ 2.76
NBPF3-208	ENST00000475869	CHL1	O00533	1208 aa		32.32	■■■□□ 2.76
NBPF3-208	ENST00000475869	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.32	■■■□□ 2.76
NBPF3-208	ENST00000475869	KIF6	Q6ZMV9	814 aa		32.3	■■■□□ 2.76
NBPF3-208	ENST00000475869	PDIA6	Q15084	440 aa		32.29	■■■□□ 2.76
NBPF3-208	ENST00000475869	SLX4	Q8IY92	1834 aa		32.28	■■■□□ 2.76
NBPF3-208	ENST00000475869	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.28	■■■□□ 2.76
NBPF3-208	ENST00000475869	SRGN	P10124	158 aa		32.28	■■■□□ 2.76
NBPF3-208	ENST00000475869	EIF2S2	P20042	333 aa	Known RBP	32.28	■■■□□ 2.76
NBPF3-208	ENST00000475869	RASSF7	Q02833	373 aa		32.28	■■■□□ 2.76
NBPF3-208	ENST00000475869	TPTE2	Q6XPS3	522 aa		32.28	■■■□□ 2.76
NBPF3-208	ENST00000475869	LRP10	Q7Z4F1	713 aa		32.28	■■■□□ 2.76
NBPF3-208	ENST00000475869	RNF181	Q9P0P0	153 aa		32.28	■■■□□ 2.76
NBPF3-208	ENST00000475869	CCDC88A	Q3V6T2	1871 aa		32.28	■■■□□ 2.76
NBPF3-208	ENST00000475869	STYK1	Q6J9G0	422 aa		32.27	■■■□□ 2.76
NBPF3-208	ENST00000475869	LAS1L	Q9Y4W2	734 aa	Known RBP	32.27	■■■□□ 2.76
NBPF3-208	ENST00000475869	ZBTB3	Q9H5J0	574 aa		32.26	■■■□□ 2.75
NBPF3-208	ENST00000475869	FER1L6	Q2WGJ9	1857 aa		32.26	■■■□□ 2.75
NBPF3-208	ENST00000475869	FAM177B	A6PVY3	158 aa		32.25	■■■□□ 2.75
NBPF3-208	ENST00000475869	KRT24	Q2M2I5	525 aa		32.25	■■■□□ 2.75
NBPF3-208	ENST00000475869	PROSER3	Q2NL68	480 aa		32.25	■■■□□ 2.75
NBPF3-208	ENST00000475869	CCDC184	Q52MB2	194 aa		32.25	■■■□□ 2.75
NBPF3-208	ENST00000475869	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.24	■■■□□ 2.75
NBPF3-208	ENST00000475869	APAF1	O14727	1248 aa		32.24	■■■□□ 2.75
NBPF3-208	ENST00000475869	MASTL	Q96GX5	879 aa		32.24	■■■□□ 2.75
NBPF3-208	ENST00000475869	KLRG2	A4D1S0	409 aa	Predicted RBP	32.23	■■■□□ 2.75
NBPF3-208	ENST00000475869	NFKBIE	O00221	500 aa		32.23	■■■□□ 2.75
NBPF3-208	ENST00000475869	KIF3C	O14782	793 aa		32.23	■■■□□ 2.75
NBPF3-208	ENST00000475869	PRELP	P51888	382 aa		32.23	■■■□□ 2.75
NBPF3-208	ENST00000475869	CNKSR1	Q969H4	720 aa		32.23	■■■□□ 2.75
NBPF3-208	ENST00000475869	C21orf2	O43822	256 aa		32.22	■■■□□ 2.75
NBPF3-208	ENST00000475869	CFAP44	Q96MT7	982 aa		32.22	■■■□□ 2.75
NBPF3-208	ENST00000475869	TIAM2	Q8IVF5	1701 aa		32.22	■■■□□ 2.75
NBPF3-208	ENST00000475869	ANXA1	P04083	346 aa		32.21	■■■□□ 2.75
NBPF3-208	ENST00000475869	LMNB1	P20700	586 aa		32.21	■■■□□ 2.75
NBPF3-208	ENST00000475869	NECTIN2	Q92692	538 aa		32.21	■■■□□ 2.75
NBPF3-208	ENST00000475869	UBN2	Q6ZU65	1347 aa		32.21	■■■□□ 2.75
NBPF3-208	ENST00000475869	PRPF40B	Q6NWY9	871 aa	Known RBP	32.2	■■■□□ 2.75
NBPF3-208	ENST00000475869	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.2	■■■□□ 2.75
NBPF3-208	ENST00000475869	NYX	Q9GZU5	481 aa		32.2	■■■□□ 2.75
NBPF3-208	ENST00000475869	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.2	■■■□□ 2.75
NBPF3-208	ENST00000475869	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.19	■■■□□ 2.74
NBPF3-208	ENST00000475869	ANKRD36C	Q5JPF3	1778 aa		32.19	■■■□□ 2.74
NBPF3-208	ENST00000475869	SENP3-EIF4A1	A0A087X0R7	540 aa		32.19	■■■□□ 2.74
NBPF3-208	ENST00000475869	GPT	P24298	496 aa		32.19	■■■□□ 2.74
NBPF3-208	ENST00000475869	ZNF34	Q8IZ26	560 aa		32.19	■■■□□ 2.74
NBPF3-208	ENST00000475869	ABCC12	Q96J65	1359 aa		32.19	■■■□□ 2.74
NBPF3-208	ENST00000475869	NPR1	P16066	1061 aa		32.18	■■■□□ 2.74
NBPF3-208	ENST00000475869	GTF2E1	P29083	439 aa	Predicted RBP	32.18	■■■□□ 2.74
NBPF3-208	ENST00000475869	DICER1	Q9UPY3	1922 aa	Known RBP	32.18	■■■□□ 2.74
NBPF3-208	ENST00000475869	ZNF853	P0CG23	659 aa		32.17	■■■□□ 2.74
NBPF3-208	ENST00000475869	NUTM1	Q86Y26	1132 aa		32.17	■■■□□ 2.74
NBPF3-208	ENST00000475869	NMRK2	Q9NPI5	230 aa		32.17	■■■□□ 2.74
NBPF3-208	ENST00000475869	MBIP	Q9NS73	344 aa		32.17	■■■□□ 2.74
NBPF3-208	ENST00000475869	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.17	■■■□□ 2.74
NBPF3-208	ENST00000475869	HOXB7	P09629	217 aa		32.16	■■■□□ 2.74
NBPF3-208	ENST00000475869	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.16	■■■□□ 2.74
NBPF3-208	ENST00000475869	ERFE	Q4G0M1	354 aa		32.15	■■■□□ 2.74
NBPF3-208	ENST00000475869	SUSD4	Q5VX71	490 aa		32.15	■■■□□ 2.74
NBPF3-208	ENST00000475869	RIC1	Q4ADV7	1423 aa		32.15	■■■□□ 2.74
NBPF3-208	ENST00000475869	COPS6	Q7L5N1	327 aa		32.14	■■■□□ 2.74
NBPF3-208	ENST00000475869	IFT57	Q9NWB7	429 aa		32.14	■■■□□ 2.74
NBPF3-208	ENST00000475869	KDM2B	Q8NHM5	1336 aa		32.13	■■■□□ 2.73
NBPF3-208	ENST00000475869	XAGE3	Q8WTP9	111 aa		32.13	■■■□□ 2.73
NBPF3-208	ENST00000475869	C7orf43	Q8WVR3	580 aa		32.13	■■■□□ 2.73
NBPF3-208	ENST00000475869	LTBP3	Q9NS15	1303 aa		32.13	■■■□□ 2.73
NBPF3-208	ENST00000475869	CHPF2	Q9P2E5	772 aa		32.13	■■■□□ 2.73
NBPF3-208	ENST00000475869	NTSR2	O95665	410 aa		32.12	■■■□□ 2.73
NBPF3-208	ENST00000475869	CALD1	Q05682	793 aa	Known RBP	32.12	■■■□□ 2.73
NBPF3-208	ENST00000475869	CRY2	Q49AN0	593 aa		32.12	■■■□□ 2.73
NBPF3-208	ENST00000475869	SOGA3	Q5TF21	947 aa		32.12	■■■□□ 2.73
NBPF3-208	ENST00000475869	HDGFL1	Q5TGJ6	251 aa		32.12	■■■□□ 2.73
NBPF3-208	ENST00000475869	PARP10	Q53GL7	1025 aa		32.11	■■■□□ 2.73
NBPF3-208	ENST00000475869	ANP32C	O43423	234 aa		32.1	■■■□□ 2.73
NBPF3-208	ENST00000475869	GNAI1	P63096	354 aa		32.1	■■■□□ 2.73
NBPF3-208	ENST00000475869	AIMP1	Q12904	312 aa	Known RBP	32.1	■■■□□ 2.73
NBPF3-208	ENST00000475869	DUSP27	Q5VZP5	1158 aa		32.1	■■■□□ 2.73
NBPF3-208	ENST00000475869	TAOK3	Q9H2K8	898 aa		32.1	■■■□□ 2.73
NBPF3-208	ENST00000475869	PPP1R42	Q7Z4L9	355 aa		32.08	■■■□□ 2.73
NBPF3-208	ENST00000475869	CEP350	Q5VT06	3117 aa		32.07	■■■□□ 2.72
NBPF3-208	ENST00000475869	MRS2	Q9HD23	443 aa		32.07	■■■□□ 2.72
NBPF3-208	ENST00000475869	DBF4	Q9UBU7	674 aa	Predicted RBP	32.07	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms