RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF39-203ENST00000475323 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
ARHGEF39-203ENST00000475323 KIF1BPQ96EK5 621 aa16.21■□□□□ 0.19
ARHGEF39-203ENST00000475323 FMN2Q9NZ56 1722 aa16.21■□□□□ 0.18
ARHGEF39-203ENST00000475323 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
ARHGEF39-203ENST00000475323 MTERF4Q7Z6M4 381 aaKnown RBP16.2■□□□□ 0.18
ARHGEF39-203ENST00000475323 FERMT3Q86UX7 667 aa16.2■□□□□ 0.18
ARHGEF39-203ENST00000475323 LTKP29376 864 aa16.2■□□□□ 0.18
ARHGEF39-203ENST00000475323 PI4KAP2A4QPH2 592 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 NLRP6P59044 892 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 OS9Q13438 667 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 CAMK4Q16566 473 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 PI4KAP1Q8N8J0 262 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 PRIMPOLQ96LW4 560 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 CCDC94Q9BW85 323 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 PDRG1Q9NUG6 133 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 KCNQ3O43525 872 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 LETM1O95202 739 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 ME3Q16798 604 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 DIAPH3Q9NSV4 1193 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 SPTLC3Q9NUV7 552 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 CHPF2Q9P2E5 772 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 ADAMTS13Q76LX8 1427 aa16.19■□□□□ 0.18
ARHGEF39-203ENST00000475323 TCEANC2Q96MN5 208 aa16.18■□□□□ 0.18
ARHGEF39-203ENST00000475323 PA2G4Q9UQ80 394 aaKnown RBP16.18■□□□□ 0.18
ARHGEF39-203ENST00000475323 EPB41L2O43491 1005 aaKnown RBP16.17■□□□□ 0.18
ARHGEF39-203ENST00000475323 HMGN5P82970 282 aaKnown RBP16.17■□□□□ 0.18
ARHGEF39-203ENST00000475323 CBX1P83916 185 aa16.17■□□□□ 0.18
ARHGEF39-203ENST00000475323 TOPAZ1Q8N9V7 1692 aa16.17■□□□□ 0.18
ARHGEF39-203ENST00000475323 MAP3K5Q99683 1374 aa16.17■□□□□ 0.18
ARHGEF39-203ENST00000475323 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
ARHGEF39-203ENST00000475323 HDGFP51858 240 aaKnown RBP16.17■□□□□ 0.18
ARHGEF39-203ENST00000475323 KIAA1524Q8TCG1 905 aa16.17■□□□□ 0.18
ARHGEF39-203ENST00000475323 TMEM2Q9UHN6 1383 aa16.17■□□□□ 0.18
ARHGEF39-203ENST00000475323 LIG1P18858 919 aa16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 HOXC9P31274 260 aa16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 BEND3Q5T5X7 828 aa16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 BCL2L12Q9HB09 334 aa16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 LGR6Q9HBX8 967 aa16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 KIF3AQ9Y496 699 aa16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 ATP6V1DQ9Y5K8 247 aa16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 TTC6Q86TZ1 520 aa16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 TPCN1Q9ULQ1 816 aa16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 CACNA1FO60840 1977 aa16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 GTF2F1P35269 517 aaKnown RBP eCLIP16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 SMAP1Q8IYB5 467 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 ZHX1Q9UKY1 873 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF39-203ENST00000475323 ATP2B3Q16720 1220 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 CDC37L1Q7L3B6 337 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 LUZP1Q86V48 1076 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 CKAP2LQ8IYA6 745 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 CYP46A1Q9Y6A2 500 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 LRRC37A3O60309 1634 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 TTC21AQ8NDW8 1320 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 DNAAF4Q8WXU2 420 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 FAM227BQ96M60 508 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 TAF6LQ9Y6J9 622 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 PTPRUQ92729 1446 aa16.15■□□□□ 0.18
ARHGEF39-203ENST00000475323 RGPD8O14715 1765 aaPredicted RBP16.14■□□□□ 0.18
ARHGEF39-203ENST00000475323 RIOK3O14730 519 aaKnown RBP16.14■□□□□ 0.17
ARHGEF39-203ENST00000475323 GLRX3O76003 335 aaKnown RBP16.14■□□□□ 0.17
ARHGEF39-203ENST00000475323 PTGS1P23219 599 aa16.14■□□□□ 0.17
ARHGEF39-203ENST00000475323 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.17
ARHGEF39-203ENST00000475323 VPS53Q5VIR6 699 aa16.14■□□□□ 0.17
ARHGEF39-203ENST00000475323 SETD1BQ9UPS6 1966 aaKnown RBP16.14■□□□□ 0.17
ARHGEF39-203ENST00000475323 LARP1BQ659C4 914 aaKnown RBP16.14■□□□□ 0.17
ARHGEF39-203ENST00000475323 PXDNLA1KZ92 1463 aa16.14■□□□□ 0.17
ARHGEF39-203ENST00000475323 TFIP11Q9UBB9 837 aaKnown RBP16.13■□□□□ 0.17
ARHGEF39-203ENST00000475323 SPDYE4A6NLX3 237 aa16.13■□□□□ 0.17
ARHGEF39-203ENST00000475323 CCDC192P0DO97 292 aa16.13■□□□□ 0.17
ARHGEF39-203ENST00000475323 NECTIN1Q15223 517 aa16.13■□□□□ 0.17
ARHGEF39-203ENST00000475323 AMOTL2Q9Y2J4 779 aa16.13■□□□□ 0.17
ARHGEF39-203ENST00000475323 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
ARHGEF39-203ENST00000475323 EIF4A1P60842 406 aaKnown RBP16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 LRMPQ12912 555 aa16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 CLASRPQ8N2M8 674 aaKnown RBP16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 KCNJ4P48050 445 aa16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 NRBP1Q9UHY1 535 aa16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 MRVI1Q9Y6F6 885 aa16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 TNRQ92752 1358 aa16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 ZSCAN20P17040 1043 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 CREB3L3Q68CJ9 461 aa16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 NWD1Q149M9 1564 aa16.12■□□□□ 0.17
ARHGEF39-203ENST00000475323 ECHDC1Q9NTX5 307 aa16.11■□□□□ 0.17
ARHGEF39-203ENST00000475323 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
ARHGEF39-203ENST00000475323 N4BP2Q86UW6 1770 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF39-203ENST00000475323 TYRO3Q06418 890 aa16.11■□□□□ 0.17
ARHGEF39-203ENST00000475323 STK3Q13188 491 aa16.11■□□□□ 0.17
ARHGEF39-203ENST00000475323 CWF19L2Q2TBE0 894 aaKnown RBP16.11■□□□□ 0.17
ARHGEF39-203ENST00000475323 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
ARHGEF39-203ENST00000475323 AACSQ86V21 672 aa16.11■□□□□ 0.17
ARHGEF39-203ENST00000475323 RUFY2Q8WXA3 655 aa16.11■□□□□ 0.17
ARHGEF39-203ENST00000475323 TTC41PQ6P2S7 1318 aa16.11■□□□□ 0.17
ARHGEF39-203ENST00000475323 ADCY9O60503 1353 aa16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 IFIT2P09913 472 aaKnown RBP16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 NMIQ13287 307 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF39-203ENST00000475323 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms