RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 GTF3C3Q9Y5Q9 886 aa15.05■□□□□ -0
HLA-DOB-208ENST00000475235 KIF13BQ9NQT8 1826 aa15.05■□□□□ -0
HLA-DOB-208ENST00000475235 FGD1P98174 961 aa15.04■□□□□ -0
HLA-DOB-208ENST00000475235 NEUROD2Q15784 382 aa15.04■□□□□ -0
HLA-DOB-208ENST00000475235 TBC1D9BQ66K14 1250 aa15.04■□□□□ -0
HLA-DOB-208ENST00000475235 CLEC4GQ6UXB4 293 aa15.04■□□□□ -0
HLA-DOB-208ENST00000475235 BICDL1Q6ZP65 573 aa15.04■□□□□ -0
HLA-DOB-208ENST00000475235 PIM2Q9P1W9 311 aa15.04■□□□□ -0
HLA-DOB-208ENST00000475235 RRP7AQ9Y3A4 280 aaKnown RBP15.04■□□□□ -0
HLA-DOB-208ENST00000475235 CARMIL3Q8ND23 1372 aa15.04■□□□□ -0
HLA-DOB-208ENST00000475235 BRD2P25440 801 aaKnown RBP15.03■□□□□ -0
HLA-DOB-208ENST00000475235 PIP4K2AP48426 406 aaPredicted RBP15.03■□□□□ -0
HLA-DOB-208ENST00000475235 SETDB2Q96T68 719 aa15.03■□□□□ -0
HLA-DOB-208ENST00000475235 NBPF26B4DH59 902 aa15.02■□□□□ -0
HLA-DOB-208ENST00000475235 KCNA3P22001 575 aa15.02■□□□□ -0
HLA-DOB-208ENST00000475235 NBPF10Q6P3W6 841 aaKnown RBP15.02■□□□□ -0
HLA-DOB-208ENST00000475235 NBPF15Q8N660 670 aa15.02■□□□□ -0
HLA-DOB-208ENST00000475235 ERBB4Q15303 1308 aa15.02■□□□□ -0
HLA-DOB-208ENST00000475235 SCN7AQ01118 1682 aa15.02□□□□□ -0.01
HLA-DOB-208ENST00000475235 DALRD3Q5D0E6 543 aaKnown RBP15.02□□□□□ -0.01
HLA-DOB-208ENST00000475235 PDZRN3Q9UPQ7 1066 aa15.02□□□□□ -0.01
HLA-DOB-208ENST00000475235 KDM3BQ7LBC6 1761 aa15.01□□□□□ -0.01
HLA-DOB-208ENST00000475235 ANP32CO43423 234 aa15.01□□□□□ -0.01
HLA-DOB-208ENST00000475235 TRIM35Q9UPQ4 493 aa15.01□□□□□ -0.01
HLA-DOB-208ENST00000475235 DLG5Q8TDM6 1919 aa15.01□□□□□ -0.01
HLA-DOB-208ENST00000475235 KIAA1551Q9HCM1 1747 aa15□□□□□ -0.01
HLA-DOB-208ENST00000475235 NPHP1O15259 732 aa15□□□□□ -0.01
HLA-DOB-208ENST00000475235 CHRNA5P30532 468 aa15□□□□□ -0.01
HLA-DOB-208ENST00000475235 CNBD1Q8NA66 436 aa15□□□□□ -0.01
HLA-DOB-208ENST00000475235 BRIP1Q9BX63 1249 aa15□□□□□ -0.01
HLA-DOB-208ENST00000475235 H0YIN7 160 aa14.99□□□□□ -0.01
HLA-DOB-208ENST00000475235 CHL1O00533 1208 aa14.99□□□□□ -0.01
HLA-DOB-208ENST00000475235 PDE6BP35913 854 aa14.99□□□□□ -0.01
HLA-DOB-208ENST00000475235 PRR5LQ6MZQ0 368 aa14.99□□□□□ -0.01
HLA-DOB-208ENST00000475235 NRXN2Q9P2S2 1712 aa14.99□□□□□ -0.01
HLA-DOB-208ENST00000475235 CHD4Q14839 1912 aa14.98□□□□□ -0.01
HLA-DOB-208ENST00000475235 ERVV-1B6SEH8 477 aa14.98□□□□□ -0.01
HLA-DOB-208ENST00000475235 ST5P78524 1137 aa14.98□□□□□ -0.01
HLA-DOB-208ENST00000475235 CALD1Q05682 793 aaKnown RBP14.98□□□□□ -0.01
HLA-DOB-208ENST00000475235 KIF6Q6ZMV9 814 aa14.98□□□□□ -0.01
HLA-DOB-208ENST00000475235 C2CD5Q86YS7 1000 aa14.98□□□□□ -0.01
HLA-DOB-208ENST00000475235 LAMB4A4D0S4 1761 aa14.98□□□□□ -0.01
HLA-DOB-208ENST00000475235 APAF1O14727 1248 aa14.97□□□□□ -0.01
HLA-DOB-208ENST00000475235 ARHGAP27Q6ZUM4 889 aa14.97□□□□□ -0.01
HLA-DOB-208ENST00000475235 LAS1LQ9Y4W2 734 aaKnown RBP14.97□□□□□ -0.01
HLA-DOB-208ENST00000475235 N4BP2Q86UW6 1770 aaPredicted RBP14.97□□□□□ -0.01
HLA-DOB-208ENST00000475235 MYL6BP14649 208 aa14.97□□□□□ -0.01
HLA-DOB-208ENST00000475235 NBPF5PQ86XG9 351 aaPredicted RBP14.97□□□□□ -0.01
HLA-DOB-208ENST00000475235 NGEFQ8N5V2 710 aa14.97□□□□□ -0.01
HLA-DOB-208ENST00000475235 CFAP44Q96MT7 982 aa14.97□□□□□ -0.01
HLA-DOB-208ENST00000475235 NIP7Q9Y221 180 aaKnown RBP eCLIP14.97□□□□□ -0.01
HLA-DOB-208ENST00000475235 ADCY9O60503 1353 aa14.96□□□□□ -0.01
HLA-DOB-208ENST00000475235 EIF2S2P20042 333 aaKnown RBP14.96□□□□□ -0.02
HLA-DOB-208ENST00000475235 TPRNQ4KMQ1 711 aa14.96□□□□□ -0.02
HLA-DOB-208ENST00000475235 TPTE2Q6XPS3 522 aa14.96□□□□□ -0.02
HLA-DOB-208ENST00000475235 TTLL6Q8N841 843 aa14.96□□□□□ -0.02
HLA-DOB-208ENST00000475235 MAP3K15Q6ZN16 1313 aa14.96□□□□□ -0.02
HLA-DOB-208ENST00000475235 BCORQ6W2J9 1755 aa14.95□□□□□ -0.02
HLA-DOB-208ENST00000475235 ATP10DQ9P241 1426 aa14.95□□□□□ -0.02
HLA-DOB-208ENST00000475235 HOXB7P09629 217 aa14.95□□□□□ -0.02
HLA-DOB-208ENST00000475235 HLFQ16534 295 aa14.94□□□□□ -0.02
HLA-DOB-208ENST00000475235 MRS2Q9HD23 443 aa14.94□□□□□ -0.02
HLA-DOB-208ENST00000475235 CCDC184Q52MB2 194 aa14.93□□□□□ -0.02
HLA-DOB-208ENST00000475235 TTLL7Q6ZT98 887 aa14.93□□□□□ -0.02
HLA-DOB-208ENST00000475235 NYXQ9GZU5 481 aa14.93□□□□□ -0.02
HLA-DOB-208ENST00000475235 IFT57Q9NWB7 429 aa14.93□□□□□ -0.02
HLA-DOB-208ENST00000475235 GTF2E1P29083 439 aaPredicted RBP14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 AFDNP55196 1824 aaKnown RBP14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 GNAI1P63096 354 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 PDIA6Q15084 440 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 CCDC24Q8N4L8 307 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 ZNF622Q969S3 477 aaKnown RBP eCLIP14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 ZBTB3Q9H5J0 574 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 GPBP1L1Q9HC44 474 aaPredicted RBP14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 ZNF853P0CG23 659 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 DSG3P32926 999 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 STYK1Q6J9G0 422 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 LRP10Q7Z4F1 713 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 CNKSR1Q969H4 720 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 MASTLQ96GX5 879 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 MBIPQ9NS73 344 aa14.92□□□□□ -0.02
HLA-DOB-208ENST00000475235 BRCA1P38398 1863 aaKnown RBP14.91□□□□□ -0.02
HLA-DOB-208ENST00000475235 SRGNP10124 158 aa14.91□□□□□ -0.02
HLA-DOB-208ENST00000475235 HDGFL1Q5TGJ6 251 aa14.91□□□□□ -0.02
HLA-DOB-208ENST00000475235 GIGYF2Q6Y7W6 1299 aaKnown RBP14.91□□□□□ -0.02
HLA-DOB-208ENST00000475235 DDX21Q9NR30 783 aaKnown RBP eCLIP14.91□□□□□ -0.02
HLA-DOB-208ENST00000475235 IBTKQ9P2D0 1353 aaPredicted RBP14.9□□□□□ -0.02
HLA-DOB-208ENST00000475235 CCDC27Q2M243 656 aa14.9□□□□□ -0.02
HLA-DOB-208ENST00000475235 KRT24Q2M2I5 525 aa14.9□□□□□ -0.02
HLA-DOB-208ENST00000475235 C9orf131Q5VYM1 1079 aa14.9□□□□□ -0.02
HLA-DOB-208ENST00000475235 KLRG2A4D1S0 409 aaPredicted RBP14.89□□□□□ -0.03
HLA-DOB-208ENST00000475235 FAM177BA6PVY3 158 aa14.89□□□□□ -0.03
HLA-DOB-208ENST00000475235 PROSER3Q2NL68 480 aa14.89□□□□□ -0.03
HLA-DOB-208ENST00000475235 PARP10Q53GL7 1025 aa14.89□□□□□ -0.03
HLA-DOB-208ENST00000475235 HSP90AB3PQ58FF7 597 aa14.89□□□□□ -0.03
HLA-DOB-208ENST00000475235 ZNF34Q8IZ26 560 aa14.89□□□□□ -0.03
HLA-DOB-208ENST00000475235 NECTIN2Q92692 538 aa14.89□□□□□ -0.03
HLA-DOB-208ENST00000475235 CHMP4AQ9BY43 222 aa14.89□□□□□ -0.03
HLA-DOB-208ENST00000475235 DBF4Q9UBU7 674 aaPredicted RBP14.89□□□□□ -0.03
HLA-DOB-208ENST00000475235 ARFGEF1Q9Y6D6 1849 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms