RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 ATP2B1P20020 1258 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 ANKRD1Q15327 319 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 USP44Q9H0E7 712 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 SLC52A2Q9HAB3 445 aa8.89□□□□□ -0.99
PHTF1-209ENST00000474926 A1BGP04217 495 aa8.88□□□□□ -0.99
PHTF1-209ENST00000474926 AKAP2Q9Y2D5 859 aa8.88□□□□□ -0.99
PHTF1-209ENST00000474926 CAMSAP1Q5T5Y3 1602 aa8.88□□□□□ -0.99
PHTF1-209ENST00000474926 GOLGA6L19H0YKK7 550 aa8.88□□□□□ -0.99
PHTF1-209ENST00000474926 IGHMBP2P38935 993 aaKnown RBP8.88□□□□□ -0.99
PHTF1-209ENST00000474926 TEX13AQ9BXU3 409 aaPredicted RBP8.88□□□□□ -0.99
PHTF1-209ENST00000474926 CHAF1AQ13111 956 aaPredicted RBP8.88□□□□□ -0.99
PHTF1-209ENST00000474926 GIGYF1O75420 1035 aaPredicted RBP8.87□□□□□ -0.99
PHTF1-209ENST00000474926 GDPD2Q9HCC8 539 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 LRP2BPQ9P2M1 347 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 USP16Q9Y5T5 823 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 NPHP4O75161 1426 aaPredicted RBP8.87□□□□□ -0.99
PHTF1-209ENST00000474926 RIMBP3CA6NJZ7 1639 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 RIMBP3BA6NNM3 1639 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 RIMBP3Q9UFD9 1639 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 QRICH2Q9H0J4 1663 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 SETBP1Q9Y6X0 1596 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 ANKRD18BA2A2Z9 1011 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 PPFIA3O75145 1194 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 NEXMIFQ5QGS0 1516 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 TMX3Q96JJ7 454 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 ZSCAN31Q96LW9 406 aaPredicted RBP8.87□□□□□ -0.99
PHTF1-209ENST00000474926 RTL1A6NKG5 1358 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 HOXB7P09629 217 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 CHMLP26374 656 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 KRT32Q14532 448 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 CCDC73Q6ZRK6 1079 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 AMOTL1Q8IY63 956 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 USP26Q9BXU7 913 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 LIMCH1Q9UPQ0 1083 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 PTPRMP28827 1452 aa8.87□□□□□ -0.99
PHTF1-209ENST00000474926 PRAMEF22A3QJZ6 481 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 HSP90AB3PQ58FF7 597 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 GNL3LQ9NVN8 582 aaKnown RBP8.86□□□□□ -0.99
PHTF1-209ENST00000474926 TPM4P67936 248 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 MPNDQ8N594 471 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 RAI14Q9P0K7 980 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 DHX16O60231 1041 aaKnown RBP8.86□□□□□ -0.99
PHTF1-209ENST00000474926 DDB1Q16531 1140 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 PROSER3Q2NL68 480 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 SASS6Q6UVJ0 657 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 CCDC34Q96HJ3 373 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 SUCLG2Q96I99 432 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 ARHGEF40Q8TER5 1519 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 CDK12Q9NYV4 1490 aaPredicted RBP8.86□□□□□ -0.99
PHTF1-209ENST00000474926 TFCP2Q12800 502 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 ZSCAN25Q6NSZ9 544 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 SIRT2Q8IXJ6 389 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 AIDAQ96BJ3 306 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 SDF4Q9BRK5 362 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 GRPEL1Q9HAV7 217 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 CTNNA3Q9UI47 895 aa8.86□□□□□ -0.99
PHTF1-209ENST00000474926 PCDH11XQ9BZA7 1347 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 PCDH11YQ9BZA8 1340 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 UBAP1LF5GYI3 381 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 GSPT1P15170 499 aaKnown RBP8.85□□□□□ -0.99
PHTF1-209ENST00000474926 PHKG2P15735 406 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 HAND2P61296 217 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 SAFBQ15424 915 aaKnown RBP eCLIP8.85□□□□□ -0.99
PHTF1-209ENST00000474926 PNPLA6Q8IY17 1366 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 ATP6V1AP38606 617 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 TDO2P48775 406 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 KRT85P78386 507 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 SART3Q15020 963 aaKnown RBP8.85□□□□□ -0.99
PHTF1-209ENST00000474926 ARID3AQ99856 593 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 U3KPZ7 1027 aaPredicted RBP8.85□□□□□ -0.99
PHTF1-209ENST00000474926 LAMC1P11047 1609 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 BAG4O95429 457 aaKnown RBP8.85□□□□□ -0.99
PHTF1-209ENST00000474926 IMMTQ16891 758 aaKnown RBP8.85□□□□□ -0.99
PHTF1-209ENST00000474926 ZGPATQ8N5A5 531 aaKnown RBP8.85□□□□□ -0.99
PHTF1-209ENST00000474926 NECAB1Q8N987 351 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 SNX21Q969T3 373 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 FAM89AQ96GI7 184 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 C8orf37Q96NL8 207 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 METTL22Q9BUU2 404 aaPredicted RBP8.85□□□□□ -0.99
PHTF1-209ENST00000474926 ZNF652Q9Y2D9 606 aa8.85□□□□□ -0.99
PHTF1-209ENST00000474926 RBM8AQ9Y5S9 174 aaKnown RBP8.85□□□□□ -0.99
PHTF1-209ENST00000474926 CDK11BP21127 795 aaKnown RBP8.84□□□□□ -0.99
PHTF1-209ENST00000474926 TIMM10P62072 90 aa8.84□□□□□ -0.99
PHTF1-209ENST00000474926 LRRC2Q9BYS8 371 aa8.84□□□□□ -0.99
PHTF1-209ENST00000474926 NACAP1Q9BZK3 213 aa8.84□□□□□ -0.99
PHTF1-209ENST00000474926 CLTCQ00610 1675 aaKnown RBP8.84□□□□□ -0.99
PHTF1-209ENST00000474926 ZPR1O75312 459 aa8.84□□□□□ -0.99
PHTF1-209ENST00000474926 BRPF1P55201 1214 aaPredicted RBP8.84□□□□□ -0.99
PHTF1-209ENST00000474926 NMIQ13287 307 aaPredicted RBP8.84□□□□□ -0.99
PHTF1-209ENST00000474926 NUP133Q8WUM0 1156 aa8.84□□□□□ -0.99
PHTF1-209ENST00000474926 PIK3C2BO00750 1634 aa8.84□□□□□ -0.99
PHTF1-209ENST00000474926 SYCE3A1L190 88 aa8.84□□□□□ -0.99
PHTF1-209ENST00000474926 CPA1P15085 419 aa8.84□□□□□ -0.99
PHTF1-209ENST00000474926 CCT2P78371 535 aaKnown RBP8.84□□□□□ -0.99
PHTF1-209ENST00000474926 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
PHTF1-209ENST00000474926 MARCH6O60337 910 aa8.84□□□□□ -1
PHTF1-209ENST00000474926 RBM25P49756 843 aaKnown RBP8.84□□□□□ -1
PHTF1-209ENST00000474926 GUCY1B3Q02153 619 aa8.84□□□□□ -1
PHTF1-209ENST00000474926 HELBQ8NG08 1087 aaPredicted RBP8.84□□□□□ -1
PHTF1-209ENST00000474926 TSPY26PQ9H489 355 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms