RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 PRKRIP1Q9H875 184 aaPredicted RBP24.2■■□□□ 1.46
DNMT3A-210ENST00000474807 TSPYL4Q9UJ04 414 aa24.2■■□□□ 1.46
DNMT3A-210ENST00000474807 CEP350Q5VT06 3117 aa24.19■■□□□ 1.46
DNMT3A-210ENST00000474807 NPHP1O15259 732 aa24.19■■□□□ 1.46
DNMT3A-210ENST00000474807 LMOD3Q0VAK6 560 aa24.19■■□□□ 1.46
DNMT3A-210ENST00000474807 NBPF5PQ86XG9 351 aaPredicted RBP24.19■■□□□ 1.46
DNMT3A-210ENST00000474807 CCDC146Q8IYE0 955 aa24.19■■□□□ 1.46
DNMT3A-210ENST00000474807 BABAM1Q9NWV8 329 aa24.19■■□□□ 1.46
DNMT3A-210ENST00000474807 NIP7Q9Y221 180 aaKnown RBP eCLIP24.19■■□□□ 1.46
DNMT3A-210ENST00000474807 PRELPP51888 382 aa24.18■■□□□ 1.46
DNMT3A-210ENST00000474807 SRGNP10124 158 aa24.17■■□□□ 1.46
DNMT3A-210ENST00000474807 WDR43Q15061 677 aaKnown RBP eCLIP24.17■■□□□ 1.46
DNMT3A-210ENST00000474807 NGEFQ8N5V2 710 aa24.17■■□□□ 1.46
DNMT3A-210ENST00000474807 NMRK2Q9NPI5 230 aa24.17■■□□□ 1.46
DNMT3A-210ENST00000474807 RRP7AQ9Y3A4 280 aaKnown RBP24.17■■□□□ 1.46
DNMT3A-210ENST00000474807 ERVV-1B6SEH8 477 aa24.16■■□□□ 1.46
DNMT3A-210ENST00000474807 NFKBIEO00221 500 aa24.16■■□□□ 1.46
DNMT3A-210ENST00000474807 LMNB1P20700 586 aa24.16■■□□□ 1.46
DNMT3A-210ENST00000474807 STYK1Q6J9G0 422 aa24.16■■□□□ 1.46
DNMT3A-210ENST00000474807 TPTE2Q6XPS3 522 aa24.16■■□□□ 1.46
DNMT3A-210ENST00000474807 RUNDC1Q96C34 613 aa24.16■■□□□ 1.46
DNMT3A-210ENST00000474807 ADAMTS8Q9UP79 889 aa24.16■■□□□ 1.46
DNMT3A-210ENST00000474807 ERBB4Q15303 1308 aa24.15■■□□□ 1.46
DNMT3A-210ENST00000474807 MYL6BP14649 208 aa24.15■■□□□ 1.46
DNMT3A-210ENST00000474807 TTLL7Q6ZT98 887 aa24.15■■□□□ 1.46
DNMT3A-210ENST00000474807 MASTLQ96GX5 879 aa24.15■■□□□ 1.46
DNMT3A-210ENST00000474807 MAP3K15Q6ZN16 1313 aa24.14■■□□□ 1.46
DNMT3A-210ENST00000474807 ZC3H4Q9UPT8 1303 aaKnown RBP24.14■■□□□ 1.46
DNMT3A-210ENST00000474807 KLRG2A4D1S0 409 aaPredicted RBP24.14■■□□□ 1.45
DNMT3A-210ENST00000474807 C21orf2O43822 256 aa24.14■■□□□ 1.45
DNMT3A-210ENST00000474807 NEUROD2Q15784 382 aa24.14■■□□□ 1.45
DNMT3A-210ENST00000474807 CNKSR1Q969H4 720 aa24.14■■□□□ 1.45
DNMT3A-210ENST00000474807 TRIM35Q9UPQ4 493 aa24.14■■□□□ 1.45
DNMT3A-210ENST00000474807 NUP98P52948 1817 aa24.13■■□□□ 1.45
DNMT3A-210ENST00000474807 TOMM70O94826 608 aa24.13■■□□□ 1.45
DNMT3A-210ENST00000474807 KDM2BQ8NHM5 1336 aa24.12■■□□□ 1.45
DNMT3A-210ENST00000474807 SLX4Q8IY92 1834 aa24.12■■□□□ 1.45
DNMT3A-210ENST00000474807 ARFGEF2Q9Y6D5 1785 aa24.12■■□□□ 1.45
DNMT3A-210ENST00000474807 FAM177BA6PVY3 158 aa24.12■■□□□ 1.45
DNMT3A-210ENST00000474807 KIF6Q6ZMV9 814 aa24.12■■□□□ 1.45
DNMT3A-210ENST00000474807 LRP10Q7Z4F1 713 aa24.12■■□□□ 1.45
DNMT3A-210ENST00000474807 ZNF219Q9P2Y4 722 aaPredicted RBP24.12■■□□□ 1.45
DNMT3A-210ENST00000474807 FER1L6Q2WGJ9 1857 aa24.12■■□□□ 1.45
DNMT3A-210ENST00000474807 CCDC88AQ3V6T2 1871 aa24.11■■□□□ 1.45
DNMT3A-210ENST00000474807 HSPA6P17066 643 aa24.11■■□□□ 1.45
DNMT3A-210ENST00000474807 PDIA6Q15084 440 aa24.11■■□□□ 1.45
DNMT3A-210ENST00000474807 PRPF40BQ6NWY9 871 aaKnown RBP24.11■■□□□ 1.45
DNMT3A-210ENST00000474807 CHL1O00533 1208 aa24.1■■□□□ 1.45
DNMT3A-210ENST00000474807 CACNA1SQ13698 1873 aa24.1■■□□□ 1.45
DNMT3A-210ENST00000474807 NPR1P16066 1061 aa24.09■■□□□ 1.45
DNMT3A-210ENST00000474807 EIF2S2P20042 333 aaKnown RBP24.09■■□□□ 1.45
DNMT3A-210ENST00000474807 ZBTB3Q9H5J0 574 aa24.09■■□□□ 1.45
DNMT3A-210ENST00000474807 C7orf43Q8WVR3 580 aa24.08■■□□□ 1.45
DNMT3A-210ENST00000474807 TIAM2Q8IVF5 1701 aa24.07■■□□□ 1.44
DNMT3A-210ENST00000474807 NYXQ9GZU5 481 aa24.07■■□□□ 1.44
DNMT3A-210ENST00000474807 RRAGCQ9HB90 399 aa24.07■■□□□ 1.44
DNMT3A-210ENST00000474807 TNRC6CQ9HCJ0 1690 aaKnown RBP24.07■■□□□ 1.44
DNMT3A-210ENST00000474807 UBN2Q6ZU65 1347 aa24.07■■□□□ 1.44
DNMT3A-210ENST00000474807 LTBP3Q9NS15 1303 aa24.07■■□□□ 1.44
DNMT3A-210ENST00000474807 GLTPD2A6NH11 291 aa24.06■■□□□ 1.44
DNMT3A-210ENST00000474807 GTF2E1P29083 439 aaPredicted RBP24.06■■□□□ 1.44
DNMT3A-210ENST00000474807 PROSER3Q2NL68 480 aa24.06■■□□□ 1.44
DNMT3A-210ENST00000474807 SOGA3Q5TF21 947 aa24.06■■□□□ 1.44
DNMT3A-210ENST00000474807 GIGYF2Q6Y7W6 1299 aaKnown RBP24.06■■□□□ 1.44
DNMT3A-210ENST00000474807 ZNF34Q8IZ26 560 aa24.06■■□□□ 1.44
DNMT3A-210ENST00000474807 ABCC12Q96J65 1359 aa24.05■■□□□ 1.44
DNMT3A-210ENST00000474807 IBTKQ9P2D0 1353 aaPredicted RBP24.05■■□□□ 1.44
DNMT3A-210ENST00000474807 ANXA1P04083 346 aa24.05■■□□□ 1.44
DNMT3A-210ENST00000474807 GPTP24298 496 aa24.05■■□□□ 1.44
DNMT3A-210ENST00000474807 KRT24Q2M2I5 525 aa24.05■■□□□ 1.44
DNMT3A-210ENST00000474807 NUTM1Q86Y26 1132 aa24.05■■□□□ 1.44
DNMT3A-210ENST00000474807 TAOK3Q9H2K8 898 aa24.05■■□□□ 1.44
DNMT3A-210ENST00000474807 DICER1Q9UPY3 1922 aaKnown RBP24.04■■□□□ 1.44
DNMT3A-210ENST00000474807 ERFEQ4G0M1 354 aa24.04■■□□□ 1.44
DNMT3A-210ENST00000474807 SUSD4Q5VX71 490 aa24.04■■□□□ 1.44
DNMT3A-210ENST00000474807 RBM46Q8TBY0 533 aaKnown RBP24.04■■□□□ 1.44
DNMT3A-210ENST00000474807 LAS1LQ9Y4W2 734 aaKnown RBP24.04■■□□□ 1.44
DNMT3A-210ENST00000474807 ZEB1P37275 1124 aaPredicted RBP24.03■■□□□ 1.44
DNMT3A-210ENST00000474807 CRY2Q49AN0 593 aa24.03■■□□□ 1.44
DNMT3A-210ENST00000474807 RIC1Q4ADV7 1423 aa24.02■■□□□ 1.44
DNMT3A-210ENST00000474807 C16orf71Q8IYS4 520 aaPredicted RBP24.02■■□□□ 1.44
DNMT3A-210ENST00000474807 NECTIN2Q92692 538 aa24.02■■□□□ 1.44
DNMT3A-210ENST00000474807 NTSR2O95665 410 aa24.01■■□□□ 1.43
DNMT3A-210ENST00000474807 ALDH1B1P30837 517 aa24.01■■□□□ 1.43
DNMT3A-210ENST00000474807 CCDC93Q567U6 631 aa24.01■■□□□ 1.43
DNMT3A-210ENST00000474807 CFAP44Q96MT7 982 aa24.01■■□□□ 1.43
DNMT3A-210ENST00000474807 APAF1O14727 1248 aa24■■□□□ 1.43
DNMT3A-210ENST00000474807 COPS6Q7L5N1 327 aa24■■□□□ 1.43
DNMT3A-210ENST00000474807 DDX21Q9NR30 783 aaKnown RBP eCLIP24■■□□□ 1.43
DNMT3A-210ENST00000474807 PARP10Q53GL7 1025 aa23.99■■□□□ 1.43
DNMT3A-210ENST00000474807 HOXB7P09629 217 aa23.98■■□□□ 1.43
DNMT3A-210ENST00000474807 VEGFAP15692 232 aaPredicted RBP23.98■■□□□ 1.43
DNMT3A-210ENST00000474807 FSTL1Q12841 308 aa23.98■■□□□ 1.43
DNMT3A-210ENST00000474807 DPY19L2Q6NUT2 758 aa23.98■■□□□ 1.43
DNMT3A-210ENST00000474807 OLFM4Q6UX06 510 aa23.98■■□□□ 1.43
DNMT3A-210ENST00000474807 PPP1R42Q7Z4L9 355 aa23.98■■□□□ 1.43
DNMT3A-210ENST00000474807 XAGE3Q8WTP9 111 aa23.98■■□□□ 1.43
DNMT3A-210ENST00000474807 ZNF853P0CG23 659 aa23.97■■□□□ 1.43
DNMT3A-210ENST00000474807 AIMP1Q12904 312 aaKnown RBP23.97■■□□□ 1.43
DNMT3A-210ENST00000474807 WDR90Q96KV7 1748 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 198.1 ms