RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 PRKRIP1Q9H875 184 aaPredicted RBP20.78■□□□□ 0.92
CDPF1-205ENST00000474256 TSPYL4Q9UJ04 414 aa20.78■□□□□ 0.92
CDPF1-205ENST00000474256 NIP7Q9Y221 180 aaKnown RBP eCLIP20.78■□□□□ 0.92
CDPF1-205ENST00000474256 SRGNP10124 158 aa20.77■□□□□ 0.92
CDPF1-205ENST00000474256 PRELPP51888 382 aa20.77■□□□□ 0.92
CDPF1-205ENST00000474256 NMRK2Q9NPI5 230 aa20.77■□□□□ 0.92
CDPF1-205ENST00000474256 ANKRD31Q8N7Z5 1873 aa20.77■□□□□ 0.92
CDPF1-205ENST00000474256 ERVV-1B6SEH8 477 aa20.76■□□□□ 0.91
CDPF1-205ENST00000474256 NFKBIEO00221 500 aa20.76■□□□□ 0.91
CDPF1-205ENST00000474256 LMNB1P20700 586 aa20.76■□□□□ 0.91
CDPF1-205ENST00000474256 STYK1Q6J9G0 422 aa20.76■□□□□ 0.91
CDPF1-205ENST00000474256 TPTE2Q6XPS3 522 aa20.76■□□□□ 0.91
CDPF1-205ENST00000474256 CCDC146Q8IYE0 955 aa20.76■□□□□ 0.91
CDPF1-205ENST00000474256 RUNDC1Q96C34 613 aa20.76■□□□□ 0.91
CDPF1-205ENST00000474256 RRP7AQ9Y3A4 280 aaKnown RBP20.76■□□□□ 0.91
CDPF1-205ENST00000474256 LAMB4A4D0S4 1761 aa20.76■□□□□ 0.91
CDPF1-205ENST00000474256 KLRG2A4D1S0 409 aaPredicted RBP20.75■□□□□ 0.91
CDPF1-205ENST00000474256 WDR43Q15061 677 aaKnown RBP eCLIP20.75■□□□□ 0.91
CDPF1-205ENST00000474256 NGEFQ8N5V2 710 aa20.75■□□□□ 0.91
CDPF1-205ENST00000474256 CNKSR1Q969H4 720 aa20.75■□□□□ 0.91
CDPF1-205ENST00000474256 MASTLQ96GX5 879 aa20.75■□□□□ 0.91
CDPF1-205ENST00000474256 ADAMTS8Q9UP79 889 aa20.75■□□□□ 0.91
CDPF1-205ENST00000474256 ERBB4Q15303 1308 aa20.75■□□□□ 0.91
CDPF1-205ENST00000474256 ZC3H4Q9UPT8 1303 aaKnown RBP20.75■□□□□ 0.91
CDPF1-205ENST00000474256 C21orf2O43822 256 aa20.74■□□□□ 0.91
CDPF1-205ENST00000474256 TOMM70O94826 608 aa20.74■□□□□ 0.91
CDPF1-205ENST00000474256 MYL6BP14649 208 aa20.74■□□□□ 0.91
CDPF1-205ENST00000474256 MAP3K15Q6ZN16 1313 aa20.74■□□□□ 0.91
CDPF1-205ENST00000474256 HSPA6P17066 643 aa20.73■□□□□ 0.91
CDPF1-205ENST00000474256 TTLL7Q6ZT98 887 aa20.73■□□□□ 0.91
CDPF1-205ENST00000474256 KDM2BQ8NHM5 1336 aa20.73■□□□□ 0.91
CDPF1-205ENST00000474256 COL11A2P13942 1736 aaPredicted RBP20.73■□□□□ 0.91
CDPF1-205ENST00000474256 NEUROD2Q15784 382 aa20.72■□□□□ 0.91
CDPF1-205ENST00000474256 PRPF40BQ6NWY9 871 aaKnown RBP20.72■□□□□ 0.91
CDPF1-205ENST00000474256 KIF6Q6ZMV9 814 aa20.72■□□□□ 0.91
CDPF1-205ENST00000474256 LRP10Q7Z4F1 713 aa20.72■□□□□ 0.91
CDPF1-205ENST00000474256 TRIM35Q9UPQ4 493 aa20.72■□□□□ 0.91
CDPF1-205ENST00000474256 PDIA6Q15084 440 aa20.71■□□□□ 0.91
CDPF1-205ENST00000474256 ZNF219Q9P2Y4 722 aaPredicted RBP20.71■□□□□ 0.91
CDPF1-205ENST00000474256 FAM177BA6PVY3 158 aa20.7■□□□□ 0.9
CDPF1-205ENST00000474256 CHL1O00533 1208 aa20.7■□□□□ 0.9
CDPF1-205ENST00000474256 NPR1P16066 1061 aa20.7■□□□□ 0.9
CDPF1-205ENST00000474256 SBF1O95248 1867 aa20.7■□□□□ 0.9
CDPF1-205ENST00000474256 EIF2S2P20042 333 aaKnown RBP20.69■□□□□ 0.9
CDPF1-205ENST00000474256 C7orf43Q8WVR3 580 aa20.69■□□□□ 0.9
CDPF1-205ENST00000474256 ZBTB3Q9H5J0 574 aa20.69■□□□□ 0.9
CDPF1-205ENST00000474256 LTBP3Q9NS15 1303 aa20.69■□□□□ 0.9
CDPF1-205ENST00000474256 SOGA3Q5TF21 947 aa20.68■□□□□ 0.9
CDPF1-205ENST00000474256 GIGYF2Q6Y7W6 1299 aaKnown RBP20.68■□□□□ 0.9
CDPF1-205ENST00000474256 NYXQ9GZU5 481 aa20.68■□□□□ 0.9
CDPF1-205ENST00000474256 RRAGCQ9HB90 399 aa20.68■□□□□ 0.9
CDPF1-205ENST00000474256 GLTPD2A6NH11 291 aa20.67■□□□□ 0.9
CDPF1-205ENST00000474256 GTF2E1P29083 439 aaPredicted RBP20.67■□□□□ 0.9
CDPF1-205ENST00000474256 ZNF34Q8IZ26 560 aa20.67■□□□□ 0.9
CDPF1-205ENST00000474256 RBM46Q8TBY0 533 aaKnown RBP20.67■□□□□ 0.9
CDPF1-205ENST00000474256 TAOK3Q9H2K8 898 aa20.67■□□□□ 0.9
CDPF1-205ENST00000474256 UBN2Q6ZU65 1347 aa20.67■□□□□ 0.9
CDPF1-205ENST00000474256 PROSER3Q2NL68 480 aa20.66■□□□□ 0.9
CDPF1-205ENST00000474256 NUTM1Q86Y26 1132 aa20.66■□□□□ 0.9
CDPF1-205ENST00000474256 IBTKQ9P2D0 1353 aaPredicted RBP20.66■□□□□ 0.9
CDPF1-205ENST00000474256 ABCC12Q96J65 1359 aa20.65■□□□□ 0.9
CDPF1-205ENST00000474256 GPTP24298 496 aa20.65■□□□□ 0.9
CDPF1-205ENST00000474256 CRY2Q49AN0 593 aa20.65■□□□□ 0.9
CDPF1-205ENST00000474256 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
CDPF1-205ENST00000474256 SLX4Q8IY92 1834 aa20.64■□□□□ 0.9
CDPF1-205ENST00000474256 ANXA1P04083 346 aa20.64■□□□□ 0.89
CDPF1-205ENST00000474256 ZEB1P37275 1124 aaPredicted RBP20.64■□□□□ 0.89
CDPF1-205ENST00000474256 KRT24Q2M2I5 525 aa20.64■□□□□ 0.89
CDPF1-205ENST00000474256 ERFEQ4G0M1 354 aa20.64■□□□□ 0.89
CDPF1-205ENST00000474256 SUSD4Q5VX71 490 aa20.64■□□□□ 0.89
CDPF1-205ENST00000474256 LAS1LQ9Y4W2 734 aaKnown RBP20.64■□□□□ 0.89
CDPF1-205ENST00000474256 CEP350Q5VT06 3117 aa20.63■□□□□ 0.89
CDPF1-205ENST00000474256 ALDH1B1P30837 517 aa20.63■□□□□ 0.89
CDPF1-205ENST00000474256 CCDC93Q567U6 631 aa20.63■□□□□ 0.89
CDPF1-205ENST00000474256 CFAP44Q96MT7 982 aa20.63■□□□□ 0.89
CDPF1-205ENST00000474256 RIC1Q4ADV7 1423 aa20.62■□□□□ 0.89
CDPF1-205ENST00000474256 NTSR2O95665 410 aa20.62■□□□□ 0.89
CDPF1-205ENST00000474256 PARP10Q53GL7 1025 aa20.62■□□□□ 0.89
CDPF1-205ENST00000474256 NECTIN2Q92692 538 aa20.62■□□□□ 0.89
CDPF1-205ENST00000474256 FER1L6Q2WGJ9 1857 aa20.62■□□□□ 0.89
CDPF1-205ENST00000474256 HOXB7P09629 217 aa20.61■□□□□ 0.89
CDPF1-205ENST00000474256 VEGFAP15692 232 aaPredicted RBP20.61■□□□□ 0.89
CDPF1-205ENST00000474256 APLP1P51693 650 aa20.61■□□□□ 0.89
CDPF1-205ENST00000474256 FSTL1Q12841 308 aa20.61■□□□□ 0.89
CDPF1-205ENST00000474256 DPY19L2Q6NUT2 758 aa20.61■□□□□ 0.89
CDPF1-205ENST00000474256 COPS6Q7L5N1 327 aa20.61■□□□□ 0.89
CDPF1-205ENST00000474256 DDX21Q9NR30 783 aaKnown RBP eCLIP20.61■□□□□ 0.89
CDPF1-205ENST00000474256 ARFGEF2Q9Y6D5 1785 aa20.61■□□□□ 0.89
CDPF1-205ENST00000474256 NUP98P52948 1817 aa20.6■□□□□ 0.89
CDPF1-205ENST00000474256 APAF1O14727 1248 aa20.6■□□□□ 0.89
CDPF1-205ENST00000474256 HOXA10P31260 410 aaPredicted RBP20.6■□□□□ 0.89
CDPF1-205ENST00000474256 PPP1R42Q7Z4L9 355 aa20.6■□□□□ 0.89
CDPF1-205ENST00000474256 XAGE3Q8WTP9 111 aa20.6■□□□□ 0.89
CDPF1-205ENST00000474256 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
CDPF1-205ENST00000474256 POTECB2RU33 542 aa20.59■□□□□ 0.89
CDPF1-205ENST00000474256 ZNF853P0CG23 659 aa20.59■□□□□ 0.89
CDPF1-205ENST00000474256 FKBP4Q02790 459 aaKnown RBP eCLIP20.59■□□□□ 0.89
CDPF1-205ENST00000474256 OLFM4Q6UX06 510 aa20.59■□□□□ 0.89
CDPF1-205ENST00000474256 RTKN2Q8IZC4 609 aa20.59■□□□□ 0.89
CDPF1-205ENST00000474256 AIMP1Q12904 312 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms