RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 VPS37CA5D8V6 355 aaPredicted RBP17.03■□□□□ 0.32
NHLRC3-204ENST00000473371 NBPF7P0C2Y1 421 aaPredicted RBP17.03■□□□□ 0.32
NHLRC3-204ENST00000473371 TMEM2Q9UHN6 1383 aa17.03■□□□□ 0.32
NHLRC3-204ENST00000473371 HSP90AB4PQ58FF6 505 aa17.03■□□□□ 0.32
NHLRC3-204ENST00000473371 BABAM1Q9NWV8 329 aa17.03■□□□□ 0.32
NHLRC3-204ENST00000473371 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
NHLRC3-204ENST00000473371 GLRX3O76003 335 aaKnown RBP17.02■□□□□ 0.32
NHLRC3-204ENST00000473371 GTF2F1P35269 517 aaKnown RBP eCLIP17.02■□□□□ 0.32
NHLRC3-204ENST00000473371 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.32
NHLRC3-204ENST00000473371 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.32
NHLRC3-204ENST00000473371 KIF3AQ9Y496 699 aa17.02■□□□□ 0.32
NHLRC3-204ENST00000473371 ADAMTS13Q76LX8 1427 aa17.02■□□□□ 0.32
NHLRC3-204ENST00000473371 PRPF40BQ6NWY9 871 aaKnown RBP17.02■□□□□ 0.32
NHLRC3-204ENST00000473371 PRDM4Q9UKN5 801 aa17.02■□□□□ 0.32
NHLRC3-204ENST00000473371 CYP46A1Q9Y6A2 500 aa17.02■□□□□ 0.32
NHLRC3-204ENST00000473371 VPS53Q5VIR6 699 aa17.02■□□□□ 0.31
NHLRC3-204ENST00000473371 ZNF710Q8N1W2 664 aa17.02■□□□□ 0.31
NHLRC3-204ENST00000473371 UBR1Q8IWV7 1749 aa17.02■□□□□ 0.31
NHLRC3-204ENST00000473371 TNRQ92752 1358 aa17.01■□□□□ 0.31
NHLRC3-204ENST00000473371 NLRP6P59044 892 aa17.01■□□□□ 0.31
NHLRC3-204ENST00000473371 PTH1RQ03431 593 aa17.01■□□□□ 0.31
NHLRC3-204ENST00000473371 SPC24Q8NBT2 197 aa17.01■□□□□ 0.31
NHLRC3-204ENST00000473371 SH2B1Q9NRF2 756 aaPredicted RBP17.01■□□□□ 0.31
NHLRC3-204ENST00000473371 AP5Z1O43299 807 aa17.01■□□□□ 0.31
NHLRC3-204ENST00000473371 TPM3P06753 285 aa17.01■□□□□ 0.31
NHLRC3-204ENST00000473371 ADCK5Q3MIX3 580 aa17.01■□□□□ 0.31
NHLRC3-204ENST00000473371 PRDM10Q9NQV6 1147 aa17.01■□□□□ 0.31
NHLRC3-204ENST00000473371 TTC41PQ6P2S7 1318 aa17.01■□□□□ 0.31
NHLRC3-204ENST00000473371 CCDC192P0DO97 292 aa17■□□□□ 0.31
NHLRC3-204ENST00000473371 KLHL34Q8N239 644 aa17■□□□□ 0.31
NHLRC3-204ENST00000473371 FAM177BA6PVY3 158 aa17■□□□□ 0.31
NHLRC3-204ENST00000473371 DDX54Q8TDD1 881 aaKnown RBP17■□□□□ 0.31
NHLRC3-204ENST00000473371 GOLGA6L6A8MZA4 724 aa17■□□□□ 0.31
NHLRC3-204ENST00000473371 DNAAF4Q8WXU2 420 aa17■□□□□ 0.31
NHLRC3-204ENST00000473371 HOXC9P31274 260 aa16.99■□□□□ 0.31
NHLRC3-204ENST00000473371 CLASRPQ8N2M8 674 aaKnown RBP16.99■□□□□ 0.31
NHLRC3-204ENST00000473371 KIAA1524Q8TCG1 905 aa16.99■□□□□ 0.31
NHLRC3-204ENST00000473371 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
NHLRC3-204ENST00000473371 PYCARDQ9ULZ3 195 aa16.99■□□□□ 0.31
NHLRC3-204ENST00000473371 CHAF1AQ13111 956 aaPredicted RBP16.99■□□□□ 0.31
NHLRC3-204ENST00000473371 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
NHLRC3-204ENST00000473371 NECAB1Q8N987 351 aa16.99■□□□□ 0.31
NHLRC3-204ENST00000473371 ZSWIM6Q9HCJ5 1215 aa16.99■□□□□ 0.31
NHLRC3-204ENST00000473371 USP42Q9H9J4 1324 aaKnown RBP16.99■□□□□ 0.31
NHLRC3-204ENST00000473371 PI4KAP2A4QPH2 592 aa16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 BEND3Q5T5X7 828 aa16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 PI4KAP1Q8N8J0 262 aa16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 TM6SF1Q9BZW5 370 aa16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 KCNF1Q9H3M0 494 aa16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 CHMP3Q9Y3E7 222 aa16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 KCNJ4P48050 445 aa16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 CHPF2Q9P2E5 772 aa16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 ZKSCAN1P17029 563 aaPredicted RBP16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 ME3Q16798 604 aa16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 PTPRUQ92729 1446 aa16.98■□□□□ 0.31
NHLRC3-204ENST00000473371 LARP1BQ659C4 914 aaKnown RBP16.97■□□□□ 0.31
NHLRC3-204ENST00000473371 GPATCH3Q96I76 525 aa16.97■□□□□ 0.31
NHLRC3-204ENST00000473371 ECHDC1Q9NTX5 307 aa16.97■□□□□ 0.31
NHLRC3-204ENST00000473371 KRT85P78386 507 aa16.97■□□□□ 0.31
NHLRC3-204ENST00000473371 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
NHLRC3-204ENST00000473371 IFIT2P09913 472 aaKnown RBP16.96■□□□□ 0.31
NHLRC3-204ENST00000473371 LTKP29376 864 aa16.96■□□□□ 0.31
NHLRC3-204ENST00000473371 BCL2L12Q9HB09 334 aa16.96■□□□□ 0.31
NHLRC3-204ENST00000473371 ST3GAL1Q11201 340 aa16.96■□□□□ 0.31
NHLRC3-204ENST00000473371 MAP3K11Q16584 847 aa16.96■□□□□ 0.31
NHLRC3-204ENST00000473371 FERMT3Q86UX7 667 aa16.96■□□□□ 0.31
NHLRC3-204ENST00000473371 NUP62CLQ9H1M0 184 aa16.96■□□□□ 0.31
NHLRC3-204ENST00000473371 TTC6Q86TZ1 520 aa16.96■□□□□ 0.31
NHLRC3-204ENST00000473371 FAM200AQ8TCP9 573 aa16.96■□□□□ 0.31
NHLRC3-204ENST00000473371 ANXA1P04083 346 aa16.95■□□□□ 0.3
NHLRC3-204ENST00000473371 CCDC171Q6TFL3 1326 aa16.95■□□□□ 0.3
NHLRC3-204ENST00000473371 EIF4A1P60842 406 aaKnown RBP16.95■□□□□ 0.3
NHLRC3-204ENST00000473371 CAMK4Q16566 473 aa16.95■□□□□ 0.3
NHLRC3-204ENST00000473371 PPP4R3BQ5MIZ7 849 aa16.95■□□□□ 0.3
NHLRC3-204ENST00000473371 KCNB2Q92953 911 aa16.95■□□□□ 0.3
NHLRC3-204ENST00000473371 AMOTL2Q9Y2J4 779 aa16.95■□□□□ 0.3
NHLRC3-204ENST00000473371 RBM8AQ9Y5S9 174 aaKnown RBP16.95■□□□□ 0.3
NHLRC3-204ENST00000473371 NECTIN1Q15223 517 aa16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 TPCN1Q9ULQ1 816 aa16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 PLEKHG1Q9ULL1 1385 aa16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 RIOK3O14730 519 aaKnown RBP16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 CBX1P83916 185 aa16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 CREB3L3Q68CJ9 461 aa16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 EVI5LQ96CN4 794 aa16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 LIG1P18858 919 aa16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 TYRO3Q06418 890 aa16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 FAM173BQ6P4H8 233 aa16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 CRYBG1Q9Y4K1 1723 aa16.94■□□□□ 0.3
NHLRC3-204ENST00000473371 PIK3C2AO00443 1686 aa16.93■□□□□ 0.3
NHLRC3-204ENST00000473371 GOLGA6L4A6NEF3 574 aa16.93■□□□□ 0.3
NHLRC3-204ENST00000473371 CDC37L1Q7L3B6 337 aa16.93■□□□□ 0.3
NHLRC3-204ENST00000473371 CHMP4AQ9BY43 222 aa16.93■□□□□ 0.3
NHLRC3-204ENST00000473371 PTGS1P23219 599 aa16.93■□□□□ 0.3
NHLRC3-204ENST00000473371 C9orf78Q9NZ63 289 aaPredicted RBP16.93■□□□□ 0.3
NHLRC3-204ENST00000473371 PA2G4Q9UQ80 394 aaKnown RBP16.93■□□□□ 0.3
NHLRC3-204ENST00000473371 MRVI1Q9Y6F6 885 aa16.93■□□□□ 0.3
NHLRC3-204ENST00000473371 NWD1Q149M9 1564 aa16.93■□□□□ 0.3
NHLRC3-204ENST00000473371 PDCP20941 246 aa16.92■□□□□ 0.3
NHLRC3-204ENST00000473371 AACSQ86V21 672 aa16.92■□□□□ 0.3
NHLRC3-204ENST00000473371 ERC1Q8IUD2 1116 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms