RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PIK3R5Q8WYR1 880 aa7.95□□□□□ -1.14
RTF1-203ENST00000473214 TMPRSS4Q9NRS4 437 aa7.95□□□□□ -1.14
RTF1-203ENST00000473214 CHPF2Q9P2E5 772 aa7.95□□□□□ -1.14
RTF1-203ENST00000473214 IFT140Q96RY7 1462 aa7.94□□□□□ -1.14
RTF1-203ENST00000473214 ADAM23O75077 832 aa7.94□□□□□ -1.14
RTF1-203ENST00000473214 CELA2BP08218 269 aaPredicted RBP7.94□□□□□ -1.14
RTF1-203ENST00000473214 MCCP23508 829 aa7.94□□□□□ -1.14
RTF1-203ENST00000473214 NBPF20Q3BBV1 942 aa7.94□□□□□ -1.14
RTF1-203ENST00000473214 ZNF784Q8NCA9 323 aaPredicted RBP7.94□□□□□ -1.14
RTF1-203ENST00000473214 PMM1Q92871 262 aa7.94□□□□□ -1.14
RTF1-203ENST00000473214 FAN1Q9Y2M0 1017 aa7.94□□□□□ -1.14
RTF1-203ENST00000473214 RSF1Q96T23 1441 aaPredicted RBP7.94□□□□□ -1.14
RTF1-203ENST00000473214 AQRO60306 1485 aaKnown RBP eCLIP7.94□□□□□ -1.144e-7■■■■□ 23.9
RTF1-203ENST00000473214 MSTNO14793 375 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 SH3BP5O60239 455 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 LILRA1O75019 489 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 PPFIA4O75335 1185 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 ADH1AP07327 375 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 GTF2F1P35269 517 aaKnown RBP eCLIP7.93□□□□□ -1.14
RTF1-203ENST00000473214 ADD1P35611 737 aaKnown RBP7.93□□□□□ -1.14
RTF1-203ENST00000473214 HDLBPQ00341 1268 aaKnown RBP7.93□□□□□ -1.14
RTF1-203ENST00000473214 MAP3K10Q02779 954 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 PLA2G4EQ3MJ16 856 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 LONRF3Q496Y0 759 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 NME8Q8N427 588 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 SPOCK3Q9BQ16 436 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 IQSEC3Q9UPP2 1182 aaPredicted RBP7.93□□□□□ -1.14
RTF1-203ENST00000473214 NOP58Q9Y2X3 529 aaKnown RBP7.93□□□□□ -1.14
RTF1-203ENST00000473214 TBX22Q9Y458 520 aa7.93□□□□□ -1.14
RTF1-203ENST00000473214 ERVH48-1M5A8F1 160 aa7.92□□□□□ -1.14
RTF1-203ENST00000473214 U2SURPO15042 1029 aaKnown RBP7.92□□□□□ -1.14
RTF1-203ENST00000473214 ATP2B1P20020 1258 aa7.92□□□□□ -1.14
RTF1-203ENST00000473214 PTGIRP43119 386 aa7.92□□□□□ -1.14
RTF1-203ENST00000473214 GAS6Q14393 721 aa7.92□□□□□ -1.14
RTF1-203ENST00000473214 TMEM164Q5U3C3 297 aa7.92□□□□□ -1.14
RTF1-203ENST00000473214 ZCRB1Q8TBF4 217 aaKnown RBP7.92□□□□□ -1.14
RTF1-203ENST00000473214 EPS8L1Q8TE68 723 aa7.92□□□□□ -1.14
RTF1-203ENST00000473214 EVI5LQ96CN4 794 aa7.92□□□□□ -1.14
RTF1-203ENST00000473214 PRKAG2Q9UGJ0 569 aa7.92□□□□□ -1.14
RTF1-203ENST00000473214 ESPNB1AK53 854 aa7.91□□□□□ -1.14
RTF1-203ENST00000473214 SERPINB4P48594 390 aa7.91□□□□□ -1.14
RTF1-203ENST00000473214 FBXO33Q7Z6M2 555 aa7.91□□□□□ -1.14
RTF1-203ENST00000473214 DCAF5Q96JK2 942 aa7.91□□□□□ -1.14
RTF1-203ENST00000473214 UCN2Q96RP3 112 aa7.91□□□□□ -1.14
RTF1-203ENST00000473214 ENAMQ9NRM1 1142 aa7.91□□□□□ -1.14
RTF1-203ENST00000473214 GABBR1Q9UBS5 961 aa7.91□□□□□ -1.14
RTF1-203ENST00000473214 MAFBQ9Y5Q3 323 aaPredicted RBP7.91□□□□□ -1.14
RTF1-203ENST00000473214 NDUFB9Q9Y6M9 179 aa7.91□□□□□ -1.14
RTF1-203ENST00000473214 CLASP1Q7Z460 1538 aa7.91□□□□□ -1.14
RTF1-203ENST00000473214 TOPBP1Q92547 1522 aa7.91□□□□□ -1.14
RTF1-203ENST00000473214 CNTNAP5Q8WYK1 1306 aa7.9□□□□□ -1.14
RTF1-203ENST00000473214 ITGB2P05107 769 aa7.9□□□□□ -1.14
RTF1-203ENST00000473214 VAC14Q08AM6 782 aa7.9□□□□□ -1.14
RTF1-203ENST00000473214 ZFYVE27Q5T4F4 411 aa7.9□□□□□ -1.14
RTF1-203ENST00000473214 LYSMD3Q7Z3D4 306 aa7.9□□□□□ -1.14
RTF1-203ENST00000473214 NLGN1Q8N2Q7 840 aa7.9□□□□□ -1.14
RTF1-203ENST00000473214 PMFBP1Q8TBY8 1022 aa7.9□□□□□ -1.14
RTF1-203ENST00000473214 STK32AQ8WU08 396 aa7.9□□□□□ -1.14
RTF1-203ENST00000473214 PIF1Q9H611 641 aa7.9□□□□□ -1.14
RTF1-203ENST00000473214 SCAMP3O14828 347 aaKnown RBP7.89□□□□□ -1.15
RTF1-203ENST00000473214 AP1G2O75843 785 aa7.89□□□□□ -1.15
RTF1-203ENST00000473214 OS9Q13438 667 aaPredicted RBP7.89□□□□□ -1.15
RTF1-203ENST00000473214 TCEAL1Q15170 157 aa7.89□□□□□ -1.15
RTF1-203ENST00000473214 CCAR1Q8IX12 1150 aaKnown RBP7.89□□□□□ -1.15
RTF1-203ENST00000473214 BACH2Q9BYV9 841 aa7.89□□□□□ -1.15
RTF1-203ENST00000473214 ALG2Q9H553 416 aa7.89□□□□□ -1.15
RTF1-203ENST00000473214 TARBP1Q13395 1621 aaKnown RBP7.89□□□□□ -1.15
RTF1-203ENST00000473214 PHF20L1A8MW92 1017 aa7.88□□□□□ -1.15
RTF1-203ENST00000473214 PAX3P23760 479 aa7.88□□□□□ -1.15
RTF1-203ENST00000473214 RNF144AP50876 292 aaPredicted RBP7.88□□□□□ -1.15
RTF1-203ENST00000473214 RAB15P59190 212 aa7.88□□□□□ -1.15
RTF1-203ENST00000473214 FOXD4Q12950 439 aaPredicted RBP7.88□□□□□ -1.15
RTF1-203ENST00000473214 RNF187Q5TA31 235 aaPredicted RBP7.88□□□□□ -1.15
RTF1-203ENST00000473214 DZIP3Q86Y13 1208 aaKnown RBP7.88□□□□□ -1.15
RTF1-203ENST00000473214 CCDC146Q8IYE0 955 aa7.88□□□□□ -1.15
RTF1-203ENST00000473214 PNMA1Q8ND90 353 aa7.88□□□□□ -1.15
RTF1-203ENST00000473214 BRINP2Q9C0B6 783 aa7.88□□□□□ -1.15
RTF1-203ENST00000473214 ZSWIM4Q9H7M6 989 aa7.88□□□□□ -1.15
RTF1-203ENST00000473214 HMX1Q9NP08 348 aaPredicted RBP7.88□□□□□ -1.15
RTF1-203ENST00000473214 ZMIZ1Q9ULJ6 1067 aa7.88□□□□□ -1.15
RTF1-203ENST00000473214 SSFA2P28290 1259 aa7.87□□□□□ -1.15
RTF1-203ENST00000473214 ELOAQ14241 798 aaKnown RBP7.87□□□□□ -1.15
RTF1-203ENST00000473214 SEPT12Q8IYM1 358 aa7.87□□□□□ -1.15
RTF1-203ENST00000473214 TINF2Q9BSI4 451 aa7.87□□□□□ -1.15
RTF1-203ENST00000473214 PNMA2Q9UL42 364 aa7.87□□□□□ -1.15
RTF1-203ENST00000473214 COL4A3BPQ9Y5P4 624 aa7.87□□□□□ -1.15
RTF1-203ENST00000473214 PRDM2Q13029 1718 aa7.86□□□□□ -1.15
RTF1-203ENST00000473214 PROCP04070 461 aa7.86□□□□□ -1.15
RTF1-203ENST00000473214 RAD51AP2Q09MP3 1159 aa7.86□□□□□ -1.15
RTF1-203ENST00000473214 FAM43BQ6ZT52 329 aaPredicted RBP7.86□□□□□ -1.15
RTF1-203ENST00000473214 BEND7Q8N7W2 519 aaPredicted RBP7.86□□□□□ -1.15
RTF1-203ENST00000473214 GMCL1Q96IK5 515 aa7.86□□□□□ -1.15
RTF1-203ENST00000473214 USP17L8P0C7I0 530 aa7.85□□□□□ -1.15
RTF1-203ENST00000473214 AAMPQ13685 434 aa7.85□□□□□ -1.15
RTF1-203ENST00000473214 TRIM22Q8IYM9 498 aa7.85□□□□□ -1.15
RTF1-203ENST00000473214 CAPN10Q9HC96 672 aa7.85□□□□□ -1.15
RTF1-203ENST00000473214 MBIPQ9NS73 344 aa7.85□□□□□ -1.15
RTF1-203ENST00000473214 G3BP2Q9UN86 482 aaKnown RBP7.85□□□□□ -1.15
RTF1-203ENST00000473214 NOVA2Q9UNW9 492 aaKnown RBP7.85□□□□□ -1.15
RTF1-203ENST00000473214 ERCC6L2Q5T890 1561 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms