RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ZNF837Q96EG3 531 aaPredicted RBP10.49□□□□□ -0.73
CLK1-209ENST00000472679 SUSD3Q96L08 255 aa10.49□□□□□ -0.73
CLK1-209ENST00000472679 NUCKS1Q9H1E3 243 aaKnown RBP10.49□□□□□ -0.73
CLK1-209ENST00000472679 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
CLK1-209ENST00000472679 ABL1P00519 1130 aa10.48□□□□□ -0.73
CLK1-209ENST00000472679 KCNA1Q09470 495 aa10.48□□□□□ -0.73
CLK1-209ENST00000472679 ZNF211Q13398 564 aaPredicted RBP10.48□□□□□ -0.73
CLK1-209ENST00000472679 UBAP2LQ14157 1087 aaKnown RBP10.48□□□□□ -0.73
CLK1-209ENST00000472679 C11orf91Q3C1V1 193 aa10.48□□□□□ -0.73
CLK1-209ENST00000472679 VWA5B2Q8N398 1253 aa10.48□□□□□ -0.73
CLK1-209ENST00000472679 H3BM21 787 aa10.47□□□□□ -0.73
CLK1-209ENST00000472679 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
CLK1-209ENST00000472679 GNEQ9Y223 722 aaKnown RBP10.47□□□□□ -0.73
CLK1-209ENST00000472679 GPC6Q9Y625 555 aaPredicted RBP10.47□□□□□ -0.73
CLK1-209ENST00000472679 IVNS1ABPQ9Y6Y0 642 aa10.47□□□□□ -0.73
CLK1-209ENST00000472679 CDC14CA4D256 554 aa10.46□□□□□ -0.73
CLK1-209ENST00000472679 H7C1W4 665 aa10.46□□□□□ -0.73
CLK1-209ENST00000472679 TERTO14746 1132 aaKnown RBP10.46□□□□□ -0.73
CLK1-209ENST00000472679 EFHC2Q5JST6 749 aa10.46□□□□□ -0.73
CLK1-209ENST00000472679 NLRP8Q86W28 1048 aa10.46□□□□□ -0.73
CLK1-209ENST00000472679 CCER1Q8TC90 406 aaPredicted RBP10.46□□□□□ -0.73
CLK1-209ENST00000472679 HELQQ8TDG4 1101 aa10.46□□□□□ -0.73
CLK1-209ENST00000472679 GTPBP3Q969Y2 492 aaKnown RBP10.46□□□□□ -0.73
CLK1-209ENST00000472679 ZCCHC2Q9C0B9 1178 aaKnown RBP10.46□□□□□ -0.73
CLK1-209ENST00000472679 MTMR7Q9Y216 660 aa10.46□□□□□ -0.73
CLK1-209ENST00000472679 IFT43Q96FT9 208 aa10.45□□□□□ -0.74
CLK1-209ENST00000472679 NEUROD4Q9HD90 331 aa10.45□□□□□ -0.74
CLK1-209ENST00000472679 GJA3Q9Y6H8 435 aa10.45□□□□□ -0.74
CLK1-209ENST00000472679 ZBTB39O15060 712 aa10.44□□□□□ -0.74
CLK1-209ENST00000472679 LBRQ14739 615 aaKnown RBP10.44□□□□□ -0.74
CLK1-209ENST00000472679 ETFBKMTQ8IXQ9 262 aa10.44□□□□□ -0.74
CLK1-209ENST00000472679 NANOS1Q8WY41 292 aaKnown RBP10.44□□□□□ -0.74
CLK1-209ENST00000472679 STIM2Q9P246 746 aa10.44□□□□□ -0.74
CLK1-209ENST00000472679 DMGDHQ9UI17 866 aaKnown RBP10.44□□□□□ -0.74
CLK1-209ENST00000472679 GPR25O00155 361 aa10.43□□□□□ -0.74
CLK1-209ENST00000472679 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
CLK1-209ENST00000472679 GPR161Q8N6U8 529 aaKnown RBP10.43□□□□□ -0.74
CLK1-209ENST00000472679 GMCL1Q96IK5 515 aa10.43□□□□□ -0.74
CLK1-209ENST00000472679 ANKIB1Q9P2G1 1089 aa10.43□□□□□ -0.74
CLK1-209ENST00000472679 HCN2Q9UL51 889 aa10.43□□□□□ -0.74
CLK1-209ENST00000472679 ERBB4Q15303 1308 aa10.42□□□□□ -0.74
CLK1-209ENST00000472679 TGFBR3LH3BV60 316 aa10.42□□□□□ -0.74
CLK1-209ENST00000472679 BNIP3LO60238 219 aa10.42□□□□□ -0.74
CLK1-209ENST00000472679 ICMTO60725 284 aa10.42□□□□□ -0.74
CLK1-209ENST00000472679 BRD2P25440 801 aaKnown RBP10.42□□□□□ -0.74
CLK1-209ENST00000472679 FKBP4Q02790 459 aaKnown RBP eCLIP10.42□□□□□ -0.74
CLK1-209ENST00000472679 SV2AQ7L0J3 742 aa10.42□□□□□ -0.74
CLK1-209ENST00000472679 BTLAQ7Z6A9 289 aa10.42□□□□□ -0.74
CLK1-209ENST00000472679 NDFIP2Q9NV92 336 aa10.42□□□□□ -0.74
CLK1-209ENST00000472679 EGFL7Q9UHF1 273 aa10.42□□□□□ -0.74
CLK1-209ENST00000472679 ATXN7O15265 892 aaPredicted RBP10.41□□□□□ -0.74
CLK1-209ENST00000472679 MPSTP25325 297 aa10.41□□□□□ -0.74
CLK1-209ENST00000472679 ECM1Q16610 540 aa10.41□□□□□ -0.74
CLK1-209ENST00000472679 SAMD5Q5TGI4 173 aa10.41□□□□□ -0.74
CLK1-209ENST00000472679 IER5Q5VY09 327 aa10.41□□□□□ -0.74
CLK1-209ENST00000472679 TREML1Q86YW5 311 aa10.41□□□□□ -0.74
CLK1-209ENST00000472679 ZNF775Q96BV0 537 aaPredicted RBP10.41□□□□□ -0.74
CLK1-209ENST00000472679 PCDHGC4Q9Y5F7 938 aa10.41□□□□□ -0.74
CLK1-209ENST00000472679 DCDC2BA2VCK2 349 aa10.4□□□□□ -0.74
CLK1-209ENST00000472679 H3BRB1 525 aa10.4□□□□□ -0.74
CLK1-209ENST00000472679 MICAL2O94851 1124 aa10.4□□□□□ -0.74
CLK1-209ENST00000472679 TYRO3Q06418 890 aa10.4□□□□□ -0.74
CLK1-209ENST00000472679 NFX1Q12986 1120 aaKnown RBP10.4□□□□□ -0.74
CLK1-209ENST00000472679 HIF1AQ16665 826 aa10.4□□□□□ -0.74
CLK1-209ENST00000472679 LCE2CQ5TA81 110 aa10.4□□□□□ -0.74
CLK1-209ENST00000472679 ABHD17AQ96GS6 310 aa10.4□□□□□ -0.74
CLK1-209ENST00000472679 TUT1Q9H6E5 874 aaKnown RBP10.4□□□□□ -0.74
CLK1-209ENST00000472679 SOWAHDA6NJG2 315 aa10.39□□□□□ -0.75
CLK1-209ENST00000472679 OPLAHO14841 1288 aa10.39□□□□□ -0.75
CLK1-209ENST00000472679 TNP2Q05952 138 aa10.39□□□□□ -0.75
CLK1-209ENST00000472679 SF3B2Q13435 895 aaKnown RBP10.39□□□□□ -0.75
CLK1-209ENST00000472679 FIGNL1Q6PIW4 674 aa10.39□□□□□ -0.75
CLK1-209ENST00000472679 CEP63Q96MT8 703 aa10.39□□□□□ -0.75
CLK1-209ENST00000472679 KHNYNO15037 678 aaKnown RBP10.38□□□□□ -0.75
CLK1-209ENST00000472679 FAM157BP0CG42 384 aa10.38□□□□□ -0.75
CLK1-209ENST00000472679 VSIG8P0DPA2 414 aa10.38□□□□□ -0.75
CLK1-209ENST00000472679 MAPTP10636 758 aaKnown RBP10.38□□□□□ -0.75
CLK1-209ENST00000472679 NPR3P17342 541 aa10.38□□□□□ -0.75
CLK1-209ENST00000472679 GRNP28799 593 aaKnown RBP10.38□□□□□ -0.75
CLK1-209ENST00000472679 IDH3AP50213 366 aa10.38□□□□□ -0.75
CLK1-209ENST00000472679 ATCAYQ86WG3 371 aa10.38□□□□□ -0.75
CLK1-209ENST00000472679 STRN4Q9NRL3 753 aa10.38□□□□□ -0.75
CLK1-209ENST00000472679 PATL2C9JE40 543 aaKnown RBP10.37□□□□□ -0.75
CLK1-209ENST00000472679 EFSO43281 561 aa10.37□□□□□ -0.75
CLK1-209ENST00000472679 INPP5BP32019 993 aa10.37□□□□□ -0.75
CLK1-209ENST00000472679 SFSWAPQ12872 951 aaKnown RBP10.37□□□□□ -0.75
CLK1-209ENST00000472679 TRIM26Q12899 539 aaPredicted RBP10.37□□□□□ -0.75
CLK1-209ENST00000472679 GRIN2CQ14957 1233 aa10.37□□□□□ -0.75
CLK1-209ENST00000472679 GLYCTKQ8IVS8 523 aa10.37□□□□□ -0.75
CLK1-209ENST00000472679 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
CLK1-209ENST00000472679 USP20Q9Y2K6 914 aa10.37□□□□□ -0.75
CLK1-209ENST00000472679 EIF1AXP47813 144 aaKnown RBP10.36□□□□□ -0.75
CLK1-209ENST00000472679 GAS6Q14393 721 aa10.36□□□□□ -0.75
CLK1-209ENST00000472679 FOXR1Q6PIV2 292 aa10.36□□□□□ -0.75
CLK1-209ENST00000472679 BRD7Q9NPI1 651 aa10.36□□□□□ -0.75
CLK1-209ENST00000472679 FAM13AO94988 1023 aa10.35□□□□□ -0.75
CLK1-209ENST00000472679 ZAP70P43403 619 aa10.35□□□□□ -0.75
CLK1-209ENST00000472679 NOM1Q5C9Z4 860 aaKnown RBP10.35□□□□□ -0.75
CLK1-209ENST00000472679 ABTB2Q8N961 1025 aa10.35□□□□□ -0.75
CLK1-209ENST00000472679 TRERF1Q96PN7 1200 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms