RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 COL15A1P39059 1388 aa22.31■■□□□ 1.16
PKD1-208ENST00000472577 NBPF26B4DH59 902 aa22.31■■□□□ 1.16
PKD1-208ENST00000472577 TM4SF1P30408 202 aa22.31■■□□□ 1.16
PKD1-208ENST00000472577 EIF5P55010 431 aaKnown RBP22.31■■□□□ 1.16
PKD1-208ENST00000472577 DALRD3Q5D0E6 543 aaKnown RBP22.31■■□□□ 1.16
PKD1-208ENST00000472577 DUSP27Q5VZP5 1158 aa22.31■■□□□ 1.16
PKD1-208ENST00000472577 NBPF10Q6P3W6 841 aaKnown RBP22.31■■□□□ 1.16
PKD1-208ENST00000472577 NBPF15Q8N660 670 aa22.31■■□□□ 1.16
PKD1-208ENST00000472577 WDR90Q96KV7 1748 aa22.31■■□□□ 1.16
PKD1-208ENST00000472577 IL6STP40189 918 aaPredicted RBP22.3■■□□□ 1.16
PKD1-208ENST00000472577 C8orf58Q8NAV2 365 aa22.3■■□□□ 1.16
PKD1-208ENST00000472577 SBF1O95248 1867 aa22.3■■□□□ 1.16
PKD1-208ENST00000472577 DLEC1Q9Y238 1755 aa22.3■■□□□ 1.16
PKD1-208ENST00000472577 EIF2S2P20042 333 aaKnown RBP22.29■■□□□ 1.16
PKD1-208ENST00000472577 APLP1P51693 650 aa22.29■■□□□ 1.16
PKD1-208ENST00000472577 ELL2O00472 640 aaPredicted RBP22.28■■□□□ 1.16
PKD1-208ENST00000472577 HOXB7P09629 217 aa22.28■■□□□ 1.16
PKD1-208ENST00000472577 TSPYL6Q8N831 410 aa22.28■■□□□ 1.16
PKD1-208ENST00000472577 RNF181Q9P0P0 153 aa22.28■■□□□ 1.16
PKD1-208ENST00000472577 ZNF330Q9Y3S2 320 aaPredicted RBP22.28■■□□□ 1.16
PKD1-208ENST00000472577 TNRC6CQ9HCJ0 1690 aaKnown RBP22.27■■□□□ 1.16
PKD1-208ENST00000472577 HNRNPUQ00839 825 aaKnown RBP eCLIP22.27■■□□□ 1.16
PKD1-208ENST00000472577 GOLGA2Q08379 1002 aa22.27■■□□□ 1.16
PKD1-208ENST00000472577 NFIXQ14938 502 aa22.27■■□□□ 1.16
PKD1-208ENST00000472577 DNAJC5GQ8N7S2 189 aa22.27■■□□□ 1.16
PKD1-208ENST00000472577 NECTIN2Q92692 538 aa22.27■■□□□ 1.16
PKD1-208ENST00000472577 BCL2L12Q9HB09 334 aa22.27■■□□□ 1.16
PKD1-208ENST00000472577 ZPR1O75312 459 aa22.26■■□□□ 1.15
PKD1-208ENST00000472577 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
PKD1-208ENST00000472577 ERBB4Q15303 1308 aa22.26■■□□□ 1.15
PKD1-208ENST00000472577 CARMIL3Q8ND23 1372 aa22.25■■□□□ 1.15
PKD1-208ENST00000472577 RASSF7Q02833 373 aa22.25■■□□□ 1.15
PKD1-208ENST00000472577 PDIA6Q15084 440 aa22.25■■□□□ 1.15
PKD1-208ENST00000472577 HDGFL1Q5TGJ6 251 aa22.25■■□□□ 1.15
PKD1-208ENST00000472577 CDCA7LQ96GN5 454 aa22.25■■□□□ 1.15
PKD1-208ENST00000472577 A0A087WZG4 1122 aa22.24■■□□□ 1.15
PKD1-208ENST00000472577 MYL6BP14649 208 aa22.24■■□□□ 1.15
PKD1-208ENST00000472577 HTRA3P83110 453 aa22.24■■□□□ 1.15
PKD1-208ENST00000472577 PROSER3Q2NL68 480 aa22.24■■□□□ 1.15
PKD1-208ENST00000472577 RBM46Q8TBY0 533 aaKnown RBP22.24■■□□□ 1.15
PKD1-208ENST00000472577 NARFQ9UHQ1 456 aa22.24■■□□□ 1.15
PKD1-208ENST00000472577 ANXA1P04083 346 aa22.23■■□□□ 1.15
PKD1-208ENST00000472577 PRELPP51888 382 aa22.23■■□□□ 1.15
PKD1-208ENST00000472577 EXOSC9Q06265 439 aaKnown RBP22.23■■□□□ 1.15
PKD1-208ENST00000472577 SLFN5Q08AF3 891 aa22.23■■□□□ 1.15
PKD1-208ENST00000472577 LRP10Q7Z4F1 713 aa22.23■■□□□ 1.15
PKD1-208ENST00000472577 TBC1D2BQ9UPU7 963 aa22.23■■□□□ 1.15
PKD1-208ENST00000472577 SCN7AQ01118 1682 aa22.23■■□□□ 1.15
PKD1-208ENST00000472577 TIAM2Q8IVF5 1701 aa22.23■■□□□ 1.15
PKD1-208ENST00000472577 E9PSI1 815 aa22.22■■□□□ 1.15
PKD1-208ENST00000472577 TWISTNBQ3B726 338 aaPredicted RBP22.22■■□□□ 1.15
PKD1-208ENST00000472577 NPM2Q86SE8 214 aaKnown RBP22.21■■□□□ 1.15
PKD1-208ENST00000472577 DZIP3Q86Y13 1208 aaKnown RBP22.21■■□□□ 1.15
PKD1-208ENST00000472577 CHPF2Q9P2E5 772 aa22.21■■□□□ 1.15
PKD1-208ENST00000472577 KDM2BQ8NHM5 1336 aa22.21■■□□□ 1.15
PKD1-208ENST00000472577 ANKRD31Q8N7Z5 1873 aa22.21■■□□□ 1.15
PKD1-208ENST00000472577 BCORQ6W2J9 1755 aa22.2■■□□□ 1.14
PKD1-208ENST00000472577 RRAGCQ9HB90 399 aa22.2■■□□□ 1.14
PKD1-208ENST00000472577 DDX21Q9NR30 783 aaKnown RBP eCLIP22.2■■□□□ 1.14
PKD1-208ENST00000472577 COL11A2P13942 1736 aaPredicted RBP22.2■■□□□ 1.14
PKD1-208ENST00000472577 CAMTA2O94983 1202 aa22.19■■□□□ 1.14
PKD1-208ENST00000472577 SERPINB2P05120 415 aa22.19■■□□□ 1.14
PKD1-208ENST00000472577 C16orf71Q8IYS4 520 aaPredicted RBP22.19■■□□□ 1.14
PKD1-208ENST00000472577 TRMT2AQ8IZ69 625 aaKnown RBP22.19■■□□□ 1.14
PKD1-208ENST00000472577 VAMP4O75379 141 aa22.18■■□□□ 1.14
PKD1-208ENST00000472577 TTLL7Q6ZT98 887 aa22.18■■□□□ 1.14
PKD1-208ENST00000472577 DBF4Q9UBU7 674 aaPredicted RBP22.18■■□□□ 1.14
PKD1-208ENST00000472577 BICDL1Q6ZP65 573 aa22.17■■□□□ 1.14
PKD1-208ENST00000472577 CCDC30Q5VVM6 783 aa22.16■■□□□ 1.14
PKD1-208ENST00000472577 ZBED9Q6R2W3 1325 aa22.15■■□□□ 1.14
PKD1-208ENST00000472577 TCERG1O14776 1098 aaKnown RBP22.15■■□□□ 1.14
PKD1-208ENST00000472577 FSTL1Q12841 308 aa22.15■■□□□ 1.14
PKD1-208ENST00000472577 C2CD5Q86YS7 1000 aa22.15■■□□□ 1.14
PKD1-208ENST00000472577 XAGE3Q8WTP9 111 aa22.15■■□□□ 1.14
PKD1-208ENST00000472577 CCDC88AQ3V6T2 1871 aa22.15■■□□□ 1.14
PKD1-208ENST00000472577 NFKBIEO00221 500 aa22.14■■□□□ 1.13
PKD1-208ENST00000472577 COPS6Q7L5N1 327 aa22.14■■□□□ 1.13
PKD1-208ENST00000472577 MAP3K15Q6ZN16 1313 aa22.13■■□□□ 1.13
PKD1-208ENST00000472577 LMNB1P20700 586 aa22.13■■□□□ 1.13
PKD1-208ENST00000472577 AIMP1Q12904 312 aaKnown RBP22.13■■□□□ 1.13
PKD1-208ENST00000472577 HLFQ16534 295 aa22.13■■□□□ 1.13
PKD1-208ENST00000472577 TBC1D9BQ66K14 1250 aa22.13■■□□□ 1.13
PKD1-208ENST00000472577 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
PKD1-208ENST00000472577 TTLL6Q8N841 843 aa22.13■■□□□ 1.13
PKD1-208ENST00000472577 KLRG1Q96E93 195 aa22.13■■□□□ 1.13
PKD1-208ENST00000472577 CHMP4AQ9BY43 222 aa22.13■■□□□ 1.13
PKD1-208ENST00000472577 HYPKQ9NX55 129 aa22.13■■□□□ 1.13
PKD1-208ENST00000472577 ZC3H4Q9UPT8 1303 aaKnown RBP22.12■■□□□ 1.13
PKD1-208ENST00000472577 CCDC24Q8N4L8 307 aa22.12■■□□□ 1.13
PKD1-208ENST00000472577 ZBTB3Q9H5J0 574 aa22.12■■□□□ 1.13
PKD1-208ENST00000472577 PHAXQ9H814 394 aaKnown RBP22.12■■□□□ 1.13
PKD1-208ENST00000472577 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
PKD1-208ENST00000472577 RGL2O15211 777 aa22.1■■□□□ 1.13
PKD1-208ENST00000472577 CLEC4GQ6UXB4 293 aa22.1■■□□□ 1.13
PKD1-208ENST00000472577 STK31Q9BXU1 1019 aa22.1■■□□□ 1.13
PKD1-208ENST00000472577 ZNF652Q9Y2D9 606 aa22.1■■□□□ 1.13
PKD1-208ENST00000472577 NUP98P52948 1817 aa22.1■■□□□ 1.13
PKD1-208ENST00000472577 H0YIN7 160 aa22.09■■□□□ 1.13
PKD1-208ENST00000472577 PRR5LQ6MZQ0 368 aa22.09■■□□□ 1.13
PKD1-208ENST00000472577 JMYQ8N9B5 988 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms