RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 KSR2Q6VAB6 950 aa13.36□□□□□ -0.27
UBE2F-220ENST00000472479 ATF7IPQ6VMQ6 1270 aa13.36□□□□□ -0.27
UBE2F-220ENST00000472479 PI4KAP1Q8N8J0 262 aa13.36□□□□□ -0.27
UBE2F-220ENST00000472479 PLBD2Q8NHP8 589 aa13.36□□□□□ -0.27
UBE2F-220ENST00000472479 ARHGEF1Q92888 912 aaKnown RBP13.36□□□□□ -0.27
UBE2F-220ENST00000472479 ZNF652Q9Y2D9 606 aa13.36□□□□□ -0.27
UBE2F-220ENST00000472479 MAP3K2Q9Y2U5 619 aa13.36□□□□□ -0.27
UBE2F-220ENST00000472479 TNS1Q9HBL0 1735 aaKnown RBP13.35□□□□□ -0.27
UBE2F-220ENST00000472479 C5P01031 1676 aa13.35□□□□□ -0.27
UBE2F-220ENST00000472479 F6X3S4 739 aa13.35□□□□□ -0.27
UBE2F-220ENST00000472479 SSFA2P28290 1259 aa13.35□□□□□ -0.27
UBE2F-220ENST00000472479 BRPF1P55201 1214 aaPredicted RBP13.35□□□□□ -0.27
UBE2F-220ENST00000472479 ZNF827Q17R98 1081 aa13.35□□□□□ -0.27
UBE2F-220ENST00000472479 DZIP1LQ8IYY4 767 aaKnown RBP13.35□□□□□ -0.27
UBE2F-220ENST00000472479 ARHGAP45Q92619 1136 aa13.35□□□□□ -0.27
UBE2F-220ENST00000472479 COL15A1P39059 1388 aa13.35□□□□□ -0.27
UBE2F-220ENST00000472479 LY75O60449 1722 aa13.34□□□□□ -0.27
UBE2F-220ENST00000472479 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
UBE2F-220ENST00000472479 AKT1S1Q96B36 256 aa13.34□□□□□ -0.27
UBE2F-220ENST00000472479 TJP1Q07157 1748 aa13.33□□□□□ -0.27
UBE2F-220ENST00000472479 MAP3K15Q6ZN16 1313 aa13.33□□□□□ -0.27
UBE2F-220ENST00000472479 NPHP1O15259 732 aa13.33□□□□□ -0.28
UBE2F-220ENST00000472479 HSP90AB3PQ58FF7 597 aa13.33□□□□□ -0.28
UBE2F-220ENST00000472479 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.28
UBE2F-220ENST00000472479 BICDL1Q6ZP65 573 aa13.33□□□□□ -0.28
UBE2F-220ENST00000472479 MYD88Q99836 296 aa13.33□□□□□ -0.28
UBE2F-220ENST00000472479 EP400Q96L91 3159 aa13.32□□□□□ -0.28
UBE2F-220ENST00000472479 ERVV-1B6SEH8 477 aa13.32□□□□□ -0.28
UBE2F-220ENST00000472479 SOCS7O14512 581 aa13.32□□□□□ -0.28
UBE2F-220ENST00000472479 ANO8Q9HCE9 1232 aaPredicted RBP13.32□□□□□ -0.28
UBE2F-220ENST00000472479 SRP68Q9UHB9 627 aaKnown RBP13.32□□□□□ -0.28
UBE2F-220ENST00000472479 NARFQ9UHQ1 456 aa13.32□□□□□ -0.28
UBE2F-220ENST00000472479 LAMB4A4D0S4 1761 aa13.32□□□□□ -0.28
UBE2F-220ENST00000472479 C4BP0C0L5 1744 aa13.31□□□□□ -0.28
UBE2F-220ENST00000472479 ATP5J2-PTCD1G3V325 749 aa13.31□□□□□ -0.28
UBE2F-220ENST00000472479 TRIM27P14373 513 aa13.31□□□□□ -0.28
UBE2F-220ENST00000472479 CCT4P50991 539 aaKnown RBP13.31□□□□□ -0.28
UBE2F-220ENST00000472479 IRX6P78412 446 aaPredicted RBP13.31□□□□□ -0.28
UBE2F-220ENST00000472479 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
UBE2F-220ENST00000472479 ITPRIPQ8IWB1 547 aa13.31□□□□□ -0.28
UBE2F-220ENST00000472479 PANK1Q8TE04 598 aa13.31□□□□□ -0.28
UBE2F-220ENST00000472479 METTL22Q9BUU2 404 aaPredicted RBP13.31□□□□□ -0.28
UBE2F-220ENST00000472479 SRCIN1Q9C0H9 1055 aa13.31□□□□□ -0.28
UBE2F-220ENST00000472479 ZNF831Q5JPB2 1677 aa13.3□□□□□ -0.28
UBE2F-220ENST00000472479 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
UBE2F-220ENST00000472479 GPTP24298 496 aa13.3□□□□□ -0.28
UBE2F-220ENST00000472479 GTF2E1P29083 439 aaPredicted RBP13.3□□□□□ -0.28
UBE2F-220ENST00000472479 HLFQ16534 295 aa13.3□□□□□ -0.28
UBE2F-220ENST00000472479 GIGYF2Q6Y7W6 1299 aaKnown RBP13.3□□□□□ -0.28
UBE2F-220ENST00000472479 LRP10Q7Z4F1 713 aa13.3□□□□□ -0.28
UBE2F-220ENST00000472479 TNNQ9UQP3 1299 aa13.3□□□□□ -0.28
UBE2F-220ENST00000472479 CAMTA2O94983 1202 aa13.29□□□□□ -0.28
UBE2F-220ENST00000472479 TCIRG1Q13488 830 aa13.29□□□□□ -0.28
UBE2F-220ENST00000472479 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
UBE2F-220ENST00000472479 R3HDM1Q15032 1099 aaKnown RBP13.29□□□□□ -0.28
UBE2F-220ENST00000472479 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
UBE2F-220ENST00000472479 SETDB2Q96T68 719 aa13.29□□□□□ -0.28
UBE2F-220ENST00000472479 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
UBE2F-220ENST00000472479 NIP7Q9Y221 180 aaKnown RBP eCLIP13.29□□□□□ -0.28
UBE2F-220ENST00000472479 COG6Q9Y2V7 657 aa13.29□□□□□ -0.28
UBE2F-220ENST00000472479 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
UBE2F-220ENST00000472479 CAPN15O75808 1086 aa13.29□□□□□ -0.28
UBE2F-220ENST00000472479 CLEC4GQ6UXB4 293 aa13.29□□□□□ -0.28
UBE2F-220ENST00000472479 TMEM57Q8N5G2 664 aa13.29□□□□□ -0.28
UBE2F-220ENST00000472479 CHMP4BQ9H444 224 aaKnown RBP13.29□□□□□ -0.28
UBE2F-220ENST00000472479 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
UBE2F-220ENST00000472479 C20orf194Q5TEA3 1177 aa13.28□□□□□ -0.28
UBE2F-220ENST00000472479 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
UBE2F-220ENST00000472479 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
UBE2F-220ENST00000472479 NLGN1Q8N2Q7 840 aa13.28□□□□□ -0.28
UBE2F-220ENST00000472479 LINS1Q8NG48 757 aa13.28□□□□□ -0.28
UBE2F-220ENST00000472479 CWC25Q9NXE8 425 aaPredicted RBP13.28□□□□□ -0.28
UBE2F-220ENST00000472479 PNPLA7Q6ZV29 1317 aa13.28□□□□□ -0.28
UBE2F-220ENST00000472479 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
UBE2F-220ENST00000472479 RGPD3A6NKT7 1758 aaPredicted RBP13.28□□□□□ -0.28
UBE2F-220ENST00000472479 RGPD4Q7Z3J3 1758 aa13.28□□□□□ -0.28
UBE2F-220ENST00000472479 ADCY9O60503 1353 aa13.27□□□□□ -0.28
UBE2F-220ENST00000472479 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.29
UBE2F-220ENST00000472479 CWF19L2Q2TBE0 894 aaKnown RBP13.27□□□□□ -0.29
UBE2F-220ENST00000472479 PPP1R42Q7Z4L9 355 aa13.27□□□□□ -0.29
UBE2F-220ENST00000472479 TAF1LQ8IZX4 1826 aa13.26□□□□□ -0.29
UBE2F-220ENST00000472479 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
UBE2F-220ENST00000472479 GYS1P13807 737 aa13.26□□□□□ -0.29
UBE2F-220ENST00000472479 FKBP8Q14318 412 aa13.26□□□□□ -0.29
UBE2F-220ENST00000472479 PARP10Q53GL7 1025 aa13.26□□□□□ -0.29
UBE2F-220ENST00000472479 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
UBE2F-220ENST00000472479 BEND3Q5T5X7 828 aa13.26□□□□□ -0.29
UBE2F-220ENST00000472479 TBC1D9BQ66K14 1250 aa13.26□□□□□ -0.29
UBE2F-220ENST00000472479 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
UBE2F-220ENST00000472479 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
UBE2F-220ENST00000472479 TRMT112Q9UI30 125 aaKnown RBP13.26□□□□□ -0.29
UBE2F-220ENST00000472479 DDX19BQ9UMR2 479 aa13.26□□□□□ -0.29
UBE2F-220ENST00000472479 CICQ96RK0 1608 aaPredicted RBP13.26□□□□□ -0.29
UBE2F-220ENST00000472479 MYH14Q7Z406 1995 aaKnown RBP13.25□□□□□ -0.29
UBE2F-220ENST00000472479 NEURL1BA8MQ27 555 aa13.25□□□□□ -0.29
UBE2F-220ENST00000472479 RLBP1P12271 317 aa13.25□□□□□ -0.29
UBE2F-220ENST00000472479 MVPQ14764 893 aaKnown RBP13.25□□□□□ -0.29
UBE2F-220ENST00000472479 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
UBE2F-220ENST00000472479 NBPF5PQ86XG9 351 aaPredicted RBP13.25□□□□□ -0.29
UBE2F-220ENST00000472479 SLC16A10Q8TF71 515 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms