RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 CCDC146Q8IYE0 955 aa19.65■□□□□ 0.74
VPS8-221ENST00000471655 TPTE2Q6XPS3 522 aa19.64■□□□□ 0.73
VPS8-221ENST00000471655 NBPF5PQ86XG9 351 aaPredicted RBP19.64■□□□□ 0.73
VPS8-221ENST00000471655 ZNF526Q8TF50 670 aaPredicted RBP19.64■□□□□ 0.73
VPS8-221ENST00000471655 TRIM35Q9UPQ4 493 aa19.64■□□□□ 0.73
VPS8-221ENST00000471655 NIP7Q9Y221 180 aaKnown RBP eCLIP19.64■□□□□ 0.73
VPS8-221ENST00000471655 CHL1O00533 1208 aa19.63■□□□□ 0.73
VPS8-221ENST00000471655 NPHP1O15259 732 aa19.63■□□□□ 0.73
VPS8-221ENST00000471655 HLFQ16534 295 aa19.63■□□□□ 0.73
VPS8-221ENST00000471655 RRP7AQ9Y3A4 280 aaKnown RBP19.63■□□□□ 0.73
VPS8-221ENST00000471655 MAP3K15Q6ZN16 1313 aa19.62■□□□□ 0.73
VPS8-221ENST00000471655 KLRG2A4D1S0 409 aaPredicted RBP19.62■□□□□ 0.73
VPS8-221ENST00000471655 SRGNP10124 158 aa19.62■□□□□ 0.73
VPS8-221ENST00000471655 NEUROD2Q15784 382 aa19.62■□□□□ 0.73
VPS8-221ENST00000471655 STYK1Q6J9G0 422 aa19.62■□□□□ 0.73
VPS8-221ENST00000471655 CCDC24Q8N4L8 307 aa19.62■□□□□ 0.73
VPS8-221ENST00000471655 ZNF622Q969S3 477 aaKnown RBP eCLIP19.62■□□□□ 0.73
VPS8-221ENST00000471655 SBF1O95248 1867 aa19.62■□□□□ 0.73
VPS8-221ENST00000471655 KIF3CO14782 793 aa19.61■□□□□ 0.73
VPS8-221ENST00000471655 KIF6Q6ZMV9 814 aa19.61■□□□□ 0.73
VPS8-221ENST00000471655 CNKSR1Q969H4 720 aa19.61■□□□□ 0.73
VPS8-221ENST00000471655 RNF181Q9P0P0 153 aa19.61■□□□□ 0.73
VPS8-221ENST00000471655 COL11A2P13942 1736 aaPredicted RBP19.6■□□□□ 0.73
VPS8-221ENST00000471655 ZC3H4Q9UPT8 1303 aaKnown RBP19.6■□□□□ 0.73
VPS8-221ENST00000471655 MYL6BP14649 208 aa19.6■□□□□ 0.73
VPS8-221ENST00000471655 NGEFQ8N5V2 710 aa19.6■□□□□ 0.73
VPS8-221ENST00000471655 MASTLQ96GX5 879 aa19.6■□□□□ 0.73
VPS8-221ENST00000471655 LMNB1P20700 586 aa19.59■□□□□ 0.73
VPS8-221ENST00000471655 PDIA6Q15084 440 aa19.59■□□□□ 0.73
VPS8-221ENST00000471655 TTLL7Q6ZT98 887 aa19.59■□□□□ 0.73
VPS8-221ENST00000471655 LRP10Q7Z4F1 713 aa19.59■□□□□ 0.73
VPS8-221ENST00000471655 SENP3-EIF4A1A0A087X0R7 540 aa19.58■□□□□ 0.72
VPS8-221ENST00000471655 NYXQ9GZU5 481 aa19.58■□□□□ 0.72
VPS8-221ENST00000471655 NUP98P52948 1817 aa19.58■□□□□ 0.72
VPS8-221ENST00000471655 NFKBIEO00221 500 aa19.57■□□□□ 0.72
VPS8-221ENST00000471655 NPR1P16066 1061 aa19.57■□□□□ 0.72
VPS8-221ENST00000471655 RASSF7Q02833 373 aa19.57■□□□□ 0.72
VPS8-221ENST00000471655 GIGYF2Q6Y7W6 1299 aaKnown RBP19.57■□□□□ 0.72
VPS8-221ENST00000471655 IBTKQ9P2D0 1353 aaPredicted RBP19.57■□□□□ 0.72
VPS8-221ENST00000471655 C21orf2O43822 256 aa19.56■□□□□ 0.72
VPS8-221ENST00000471655 EIF2S2P20042 333 aaKnown RBP19.56■□□□□ 0.72
VPS8-221ENST00000471655 PRELPP51888 382 aa19.56■□□□□ 0.72
VPS8-221ENST00000471655 SOGA3Q5TF21 947 aa19.56■□□□□ 0.72
VPS8-221ENST00000471655 ZNF34Q8IZ26 560 aa19.56■□□□□ 0.72
VPS8-221ENST00000471655 CFAP44Q96MT7 982 aa19.56■□□□□ 0.72
VPS8-221ENST00000471655 KDM2BQ8NHM5 1336 aa19.55■□□□□ 0.72
VPS8-221ENST00000471655 LTBP3Q9NS15 1303 aa19.55■□□□□ 0.72
VPS8-221ENST00000471655 ARFGEF2Q9Y6D5 1785 aa19.55■□□□□ 0.72
VPS8-221ENST00000471655 HOXB7P09629 217 aa19.55■□□□□ 0.72
VPS8-221ENST00000471655 PRPF40BQ6NWY9 871 aaKnown RBP19.55■□□□□ 0.72
VPS8-221ENST00000471655 ZBTB3Q9H5J0 574 aa19.55■□□□□ 0.72
VPS8-221ENST00000471655 TOMM70O94826 608 aa19.54■□□□□ 0.72
VPS8-221ENST00000471655 GTF2E1P29083 439 aaPredicted RBP19.54■□□□□ 0.72
VPS8-221ENST00000471655 C7orf43Q8WVR3 580 aa19.54■□□□□ 0.72
VPS8-221ENST00000471655 NMRK2Q9NPI5 230 aa19.54■□□□□ 0.72
VPS8-221ENST00000471655 FER1L6Q2WGJ9 1857 aa19.54■□□□□ 0.72
VPS8-221ENST00000471655 SLX4Q8IY92 1834 aa19.53■□□□□ 0.72
VPS8-221ENST00000471655 RIC1Q4ADV7 1423 aa19.53■□□□□ 0.72
VPS8-221ENST00000471655 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
VPS8-221ENST00000471655 FAM177BA6PVY3 158 aa19.53■□□□□ 0.72
VPS8-221ENST00000471655 APAF1O14727 1248 aa19.53■□□□□ 0.72
VPS8-221ENST00000471655 DDX21Q9NR30 783 aaKnown RBP eCLIP19.53■□□□□ 0.72
VPS8-221ENST00000471655 LAS1LQ9Y4W2 734 aaKnown RBP19.53■□□□□ 0.72
VPS8-221ENST00000471655 UBN2Q6ZU65 1347 aa19.52■□□□□ 0.72
VPS8-221ENST00000471655 ZNF853P0CG23 659 aa19.52■□□□□ 0.72
VPS8-221ENST00000471655 ALDH1B1P30837 517 aa19.52■□□□□ 0.72
VPS8-221ENST00000471655 CALD1Q05682 793 aaKnown RBP19.52■□□□□ 0.72
VPS8-221ENST00000471655 PROSER3Q2NL68 480 aa19.52■□□□□ 0.72
VPS8-221ENST00000471655 CRY2Q49AN0 593 aa19.52■□□□□ 0.72
VPS8-221ENST00000471655 PARP10Q53GL7 1025 aa19.52■□□□□ 0.72
VPS8-221ENST00000471655 KRT24Q2M2I5 525 aa19.51■□□□□ 0.71
VPS8-221ENST00000471655 SUSD4Q5VX71 490 aa19.51■□□□□ 0.71
VPS8-221ENST00000471655 ZNF219Q9P2Y4 722 aaPredicted RBP19.51■□□□□ 0.71
VPS8-221ENST00000471655 GLTPD2A6NH11 291 aa19.5■□□□□ 0.71
VPS8-221ENST00000471655 HSPA6P17066 643 aa19.5■□□□□ 0.71
VPS8-221ENST00000471655 GPTP24298 496 aa19.5■□□□□ 0.71
VPS8-221ENST00000471655 ERFEQ4G0M1 354 aa19.5■□□□□ 0.71
VPS8-221ENST00000471655 COPS6Q7L5N1 327 aa19.5■□□□□ 0.71
VPS8-221ENST00000471655 PPP1R42Q7Z4L9 355 aa19.5■□□□□ 0.71
VPS8-221ENST00000471655 NUTM1Q86Y26 1132 aa19.5■□□□□ 0.71
VPS8-221ENST00000471655 TAOK3Q9H2K8 898 aa19.5■□□□□ 0.71
VPS8-221ENST00000471655 IFT57Q9NWB7 429 aa19.5■□□□□ 0.71
VPS8-221ENST00000471655 CCDC88AQ3V6T2 1871 aa19.5■□□□□ 0.71
VPS8-221ENST00000471655 ABCC12Q96J65 1359 aa19.49■□□□□ 0.71
VPS8-221ENST00000471655 NTSR2O95665 410 aa19.49■□□□□ 0.71
VPS8-221ENST00000471655 ANXA1P04083 346 aa19.49■□□□□ 0.71
VPS8-221ENST00000471655 GNAI1P63096 354 aa19.49■□□□□ 0.71
VPS8-221ENST00000471655 CCDC93Q567U6 631 aa19.49■□□□□ 0.71
VPS8-221ENST00000471655 HSP90AB3PQ58FF7 597 aa19.49■□□□□ 0.71
VPS8-221ENST00000471655 MBIPQ9NS73 344 aa19.49■□□□□ 0.71
VPS8-221ENST00000471655 TNRC6CQ9HCJ0 1690 aaKnown RBP19.49■□□□□ 0.71
VPS8-221ENST00000471655 HOXA10P31260 410 aaPredicted RBP19.48■□□□□ 0.71
VPS8-221ENST00000471655 HDGFL1Q5TGJ6 251 aa19.48■□□□□ 0.71
VPS8-221ENST00000471655 RBM46Q8TBY0 533 aaKnown RBP19.48■□□□□ 0.71
VPS8-221ENST00000471655 XAGE3Q8WTP9 111 aa19.48■□□□□ 0.71
VPS8-221ENST00000471655 NECTIN2Q92692 538 aa19.48■□□□□ 0.71
VPS8-221ENST00000471655 RRAGCQ9HB90 399 aa19.48■□□□□ 0.71
VPS8-221ENST00000471655 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
VPS8-221ENST00000471655 DICER1Q9UPY3 1922 aaKnown RBP19.48■□□□□ 0.71
VPS8-221ENST00000471655 RNF123Q5XPI4 1314 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms