RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 ABTB2Q8N961 1025 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 NBPF4Q96M43 638 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 SPSB2Q99619 263 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 OSBPL7Q9BZF2 842 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 KANSL2Q9H9L4 492 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 G3BP2Q9UN86 482 aaKnown RBP8.47□□□□□ -1.05
NF1-208ENST00000471572 DNAJC6O75061 913 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 AMPD3Q01432 767 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 CBLBQ13191 982 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 PLEKHG4Q58EX7 1191 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 ERMP1Q7Z2K6 904 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 EDEM1Q92611 657 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 OSBPL3Q9H4L5 887 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 ETNK1Q9HBU6 452 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.47□□□□□ -1.05
NF1-208ENST00000471572 DDX56Q9NY93 547 aaKnown RBP8.47□□□□□ -1.05
NF1-208ENST00000471572 SPG7Q9UQ90 795 aa8.47□□□□□ -1.05
NF1-208ENST00000471572 GORABQ5T7V8 394 aa8.46□□□□□ -1.05
NF1-208ENST00000471572 RASGRP4Q8TDF6 673 aa8.46□□□□□ -1.05
NF1-208ENST00000471572 MYO19Q96H55 970 aa8.46□□□□□ -1.05
NF1-208ENST00000471572 SPC25Q9HBM1 224 aa8.46□□□□□ -1.05
NF1-208ENST00000471572 GABBR1Q9UBS5 961 aa8.46□□□□□ -1.05
NF1-208ENST00000471572 BACH1O14867 736 aa8.46□□□□□ -1.06
NF1-208ENST00000471572 INHAP05111 366 aa8.46□□□□□ -1.06
NF1-208ENST00000471572 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.46□□□□□ -1.06
NF1-208ENST00000471572 SLC9A9Q8IVB4 645 aa8.46□□□□□ -1.06
NF1-208ENST00000471572 CCDC24Q8N4L8 307 aa8.46□□□□□ -1.06
NF1-208ENST00000471572 MKL1Q969V6 931 aa8.46□□□□□ -1.06
NF1-208ENST00000471572 FRMD6Q96NE9 622 aa8.46□□□□□ -1.06
NF1-208ENST00000471572 SRPK1Q96SB4 655 aaKnown RBP8.46□□□□□ -1.06
NF1-208ENST00000471572 NBPF3Q9H094 633 aa8.46□□□□□ -1.06
NF1-208ENST00000471572 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.46□□□□□ -1.06
NF1-208ENST00000471572 ERVK-9P63128 1117 aa8.45□□□□□ -1.06
NF1-208ENST00000471572 ZNF511Q8NB15 262 aa8.45□□□□□ -1.06
NF1-208ENST00000471572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.45□□□□□ -1.06
NF1-208ENST00000471572 SNTG2Q9NY99 539 aa8.45□□□□□ -1.06
NF1-208ENST00000471572 SCHIP1Q9P0W5 487 aaPredicted RBP8.45□□□□□ -1.06
NF1-208ENST00000471572 RASA3Q14644 834 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 C12orf49Q9H741 205 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 USP3Q9Y6I4 520 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 CCDC180Q9P1Z9 1646 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 FAM221BA6H8Z2 402 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 A6NHS1 94 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 ERVH48-1M5A8F1 160 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 IRS1P35568 1242 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 ETFBP38117 255 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 USP5P45974 858 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 HSP90AB2PQ58FF8 381 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 SLC4A9Q96Q91 983 aa8.44□□□□□ -1.06
NF1-208ENST00000471572 U2SURPO15042 1029 aaKnown RBP8.43□□□□□ -1.06
NF1-208ENST00000471572 ZAP70P43403 619 aa8.42□□□□□ -1.06
NF1-208ENST00000471572 TAF1CQ15572 869 aaPredicted RBP8.42□□□□□ -1.06
NF1-208ENST00000471572 INTS6LQ5JSJ4 861 aaKnown RBP8.42□□□□□ -1.06
NF1-208ENST00000471572 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
NF1-208ENST00000471572 TRMT44Q8IYL2 757 aaKnown RBP8.42□□□□□ -1.06
NF1-208ENST00000471572 KCTD15Q96SI1 283 aaPredicted RBP8.42□□□□□ -1.06
NF1-208ENST00000471572 MRVI1Q9Y6F6 885 aa8.42□□□□□ -1.06
NF1-208ENST00000471572 KLF4O43474 513 aa8.42□□□□□ -1.06
NF1-208ENST00000471572 GGNBP2Q9H3C7 697 aa8.42□□□□□ -1.06
NF1-208ENST00000471572 SSBP05455 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
NF1-208ENST00000471572 USPL1Q5W0Q7 1092 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 POTEAQ6S8J7 498 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 ANKS3Q6ZW76 656 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 KBTBD4Q9NVX7 518 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 TLL1O43897 1013 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 S100BP04271 92 aaPredicted RBP8.41□□□□□ -1.06
NF1-208ENST00000471572 NASPP49321 788 aaPredicted RBP8.41□□□□□ -1.06
NF1-208ENST00000471572 TICAM2Q86XR7 235 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 EPS8L3Q8TE67 593 aaKnown RBP8.41□□□□□ -1.06
NF1-208ENST00000471572 PMM1Q92871 262 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 SEC16BQ96JE7 1060 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 DEPDC7Q96QD5 511 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 FANCLQ9NW38 375 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 PRR12Q9ULL5 1215 aa8.41□□□□□ -1.06
NF1-208ENST00000471572 PSMA6P60900 246 aaKnown RBP8.4□□□□□ -1.06
NF1-208ENST00000471572 NGLY1Q96IV0 654 aa8.4□□□□□ -1.06
NF1-208ENST00000471572 DNAJC25Q9H1X3 360 aa8.4□□□□□ -1.06
NF1-208ENST00000471572 SIRPGQ9P1W8 387 aa8.4□□□□□ -1.06
NF1-208ENST00000471572 PRKAB1Q9Y478 270 aa8.4□□□□□ -1.06
NF1-208ENST00000471572 A6NJY4 79 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 ST13P50502 369 aaKnown RBP8.39□□□□□ -1.07
NF1-208ENST00000471572 PPP4CP60510 307 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 RAB33AQ14088 237 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 SH3TC2Q8TF17 1288 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 HNRNPLLQ8WVV9 542 aaKnown RBP8.39□□□□□ -1.07
NF1-208ENST00000471572 NUDT16Q96DE0 195 aaKnown RBP8.39□□□□□ -1.07
NF1-208ENST00000471572 HPS5Q9UPZ3 1129 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 USP17L7P0C7H9 530 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 NFX1Q12986 1120 aaKnown RBP8.39□□□□□ -1.07
NF1-208ENST00000471572 DGKZQ13574 1117 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 MTFR1Q15390 333 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 MORC4Q8TE76 937 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 KLK14Q9P0G3 267 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 MAGEC2Q9UBF1 373 aaPredicted RBP8.39□□□□□ -1.07
NF1-208ENST00000471572 ADAMTS1Q9UHI8 967 aa8.39□□□□□ -1.07
NF1-208ENST00000471572 CDC45O75419 566 aa8.38□□□□□ -1.07
NF1-208ENST00000471572 PDGFRBP09619 1106 aa8.38□□□□□ -1.07
NF1-208ENST00000471572 NOS2P35228 1153 aa8.38□□□□□ -1.07
NF1-208ENST00000471572 FMNL3Q8IVF7 1028 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms