RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 ST5P78524 1137 aa30.69■■■□□ 2.5
RNF220-208ENST00000471494 CCDC24Q8N4L8 307 aa30.69■■■□□ 2.5
RNF220-208ENST00000471494 PDZRN3Q9UPQ7 1066 aa30.69■■■□□ 2.5
RNF220-208ENST00000471494 SBF1O95248 1867 aa30.69■■■□□ 2.5
RNF220-208ENST00000471494 TTLL6Q8N841 843 aa30.68■■■□□ 2.5
RNF220-208ENST00000471494 CACNA1SQ13698 1873 aa30.67■■■□□ 2.5
RNF220-208ENST00000471494 C1QTNF8P60827 252 aa30.67■■■□□ 2.5
RNF220-208ENST00000471494 NGEFQ8N5V2 710 aa30.67■■■□□ 2.5
RNF220-208ENST00000471494 NBPF5PQ86XG9 351 aaPredicted RBP30.66■■■□□ 2.5
RNF220-208ENST00000471494 ERBB4Q15303 1308 aa30.66■■■□□ 2.5
RNF220-208ENST00000471494 MYL6BP14649 208 aa30.65■■■□□ 2.5
RNF220-208ENST00000471494 NIP7Q9Y221 180 aaKnown RBP eCLIP30.65■■■□□ 2.5
RNF220-208ENST00000471494 KIF6Q6ZMV9 814 aa30.64■■■□□ 2.5
RNF220-208ENST00000471494 TRIM35Q9UPQ4 493 aa30.64■■■□□ 2.5
RNF220-208ENST00000471494 C9orf131Q5VYM1 1079 aa30.63■■■□□ 2.49
RNF220-208ENST00000471494 ZNF622Q969S3 477 aaKnown RBP eCLIP30.63■■■□□ 2.499e-6■■□□□ 12.8
RNF220-208ENST00000471494 ARFGEF2Q9Y6D5 1785 aa30.62■■■□□ 2.49
RNF220-208ENST00000471494 HLFQ16534 295 aa30.62■■■□□ 2.49
RNF220-208ENST00000471494 LAS1LQ9Y4W2 734 aaKnown RBP30.62■■■□□ 2.49
RNF220-208ENST00000471494 MAP3K15Q6ZN16 1313 aa30.61■■■□□ 2.49
RNF220-208ENST00000471494 CCDC88AQ3V6T2 1871 aa30.61■■■□□ 2.49
RNF220-208ENST00000471494 ZNF316A6NFI3 1004 aaPredicted RBP30.6■■■□□ 2.49
RNF220-208ENST00000471494 ERVV-1B6SEH8 477 aa30.6■■■□□ 2.49
RNF220-208ENST00000471494 EIF2S2P20042 333 aaKnown RBP30.6■■■□□ 2.49
RNF220-208ENST00000471494 TTLL7Q6ZT98 887 aa30.6■■■□□ 2.49
RNF220-208ENST00000471494 TPTE2Q6XPS3 522 aa30.59■■■□□ 2.49
RNF220-208ENST00000471494 RNF181Q9P0P0 153 aa30.59■■■□□ 2.49
RNF220-208ENST00000471494 FAM177BA6PVY3 158 aa30.58■■■□□ 2.49
RNF220-208ENST00000471494 CHL1O00533 1208 aa30.58■■■□□ 2.49
RNF220-208ENST00000471494 ZBTB3Q9H5J0 574 aa30.57■■■□□ 2.48
RNF220-208ENST00000471494 SLX4Q8IY92 1834 aa30.57■■■□□ 2.48
RNF220-208ENST00000471494 RASSF7Q02833 373 aa30.56■■■□□ 2.48
RNF220-208ENST00000471494 FER1L6Q2WGJ9 1857 aa30.55■■■□□ 2.48
RNF220-208ENST00000471494 APAF1O14727 1248 aa30.55■■■□□ 2.48
RNF220-208ENST00000471494 SRGNP10124 158 aa30.55■■■□□ 2.48
RNF220-208ENST00000471494 GTF2E1P29083 439 aaPredicted RBP30.55■■■□□ 2.48
RNF220-208ENST00000471494 STYK1Q6J9G0 422 aa30.55■■■□□ 2.48
RNF220-208ENST00000471494 CNKSR1Q969H4 720 aa30.55■■■□□ 2.48
RNF220-208ENST00000471494 MASTLQ96GX5 879 aa30.54■■■□□ 2.48
RNF220-208ENST00000471494 TIAM2Q8IVF5 1701 aa30.53■■■□□ 2.48
RNF220-208ENST00000471494 NYXQ9GZU5 481 aa30.53■■■□□ 2.48
RNF220-208ENST00000471494 ANKRD36CQ5JPF3 1778 aa30.52■■■□□ 2.48
RNF220-208ENST00000471494 PDIA6Q15084 440 aa30.52■■■□□ 2.48
RNF220-208ENST00000471494 KRT24Q2M2I5 525 aa30.52■■■□□ 2.48
RNF220-208ENST00000471494 NECTIN2Q92692 538 aa30.52■■■□□ 2.48
RNF220-208ENST00000471494 ZNF219Q9P2Y4 722 aaPredicted RBP30.52■■■□□ 2.48
RNF220-208ENST00000471494 TNRC6CQ9HCJ0 1690 aaKnown RBP30.52■■■□□ 2.48
RNF220-208ENST00000471494 SENP3-EIF4A1A0A087X0R7 540 aa30.51■■■□□ 2.47
RNF220-208ENST00000471494 C21orf2O43822 256 aa30.51■■■□□ 2.47
RNF220-208ENST00000471494 LMNB1P20700 586 aa30.51■■■□□ 2.47
RNF220-208ENST00000471494 PROSER3Q2NL68 480 aa30.51■■■□□ 2.47
RNF220-208ENST00000471494 CFAP44Q96MT7 982 aa30.51■■■□□ 2.47
RNF220-208ENST00000471494 ANXA1P04083 346 aa30.5■■■□□ 2.47
RNF220-208ENST00000471494 GPTP24298 496 aa30.5■■■□□ 2.47
RNF220-208ENST00000471494 PRPF40BQ6NWY9 871 aaKnown RBP30.5■■■□□ 2.47
RNF220-208ENST00000471494 LRP10Q7Z4F1 713 aa30.5■■■□□ 2.47
RNF220-208ENST00000471494 NFKBIEO00221 500 aa30.49■■■□□ 2.47
RNF220-208ENST00000471494 NPR1P16066 1061 aa30.49■■■□□ 2.47
RNF220-208ENST00000471494 CALD1Q05682 793 aaKnown RBP30.49■■■□□ 2.47
RNF220-208ENST00000471494 CCDC184Q52MB2 194 aa30.49■■■□□ 2.47
RNF220-208ENST00000471494 GIGYF2Q6Y7W6 1299 aaKnown RBP30.49■■■□□ 2.47
RNF220-208ENST00000471494 IBTKQ9P2D0 1353 aaPredicted RBP30.49■■■□□ 2.47
RNF220-208ENST00000471494 DICER1Q9UPY3 1922 aaKnown RBP30.49■■■□□ 2.47
RNF220-208ENST00000471494 KIF3CO14782 793 aa30.48■■■□□ 2.47
RNF220-208ENST00000471494 ANP32CO43423 234 aa30.48■■■□□ 2.47
RNF220-208ENST00000471494 UBN2Q6ZU65 1347 aa30.47■■■□□ 2.47
RNF220-208ENST00000471494 ZC3H4Q9UPT8 1303 aaKnown RBP30.47■■■□□ 2.47
RNF220-208ENST00000471494 ABCC12Q96J65 1359 aa30.47■■■□□ 2.47
RNF220-208ENST00000471494 KLRG2A4D1S0 409 aaPredicted RBP30.47■■■□□ 2.47
RNF220-208ENST00000471494 KDM2BQ8NHM5 1336 aa30.47■■■□□ 2.47
RNF220-208ENST00000471494 HOXB7P09629 217 aa30.46■■■□□ 2.47
RNF220-208ENST00000471494 NUTM1Q86Y26 1132 aa30.46■■■□□ 2.47
RNF220-208ENST00000471494 ZNF34Q8IZ26 560 aa30.46■■■□□ 2.47
RNF220-208ENST00000471494 DDX21Q9NR30 783 aaKnown RBP eCLIP30.46■■■□□ 2.47
RNF220-208ENST00000471494 SOGA3Q5TF21 947 aa30.45■■■□□ 2.47
RNF220-208ENST00000471494 HDGFL1Q5TGJ6 251 aa30.45■■■□□ 2.47
RNF220-208ENST00000471494 NMRK2Q9NPI5 230 aa30.45■■■□□ 2.47
RNF220-208ENST00000471494 MBIPQ9NS73 344 aa30.45■■■□□ 2.47
RNF220-208ENST00000471494 IFT57Q9NWB7 429 aa30.45■■■□□ 2.47
RNF220-208ENST00000471494 PRELPP51888 382 aa30.44■■■□□ 2.46
RNF220-208ENST00000471494 AIMP1Q12904 312 aaKnown RBP30.44■■■□□ 2.46
RNF220-208ENST00000471494 ERFEQ4G0M1 354 aa30.44■■■□□ 2.46
RNF220-208ENST00000471494 COPS6Q7L5N1 327 aa30.44■■■□□ 2.46
RNF220-208ENST00000471494 XAGE3Q8WTP9 111 aa30.44■■■□□ 2.46
RNF220-208ENST00000471494 CHPF2Q9P2E5 772 aa30.44■■■□□ 2.46
RNF220-208ENST00000471494 RIC1Q4ADV7 1423 aa30.44■■■□□ 2.46
RNF220-208ENST00000471494 GNAI1P63096 354 aa30.43■■■□□ 2.46
RNF220-208ENST00000471494 PARP10Q53GL7 1025 aa30.43■■■□□ 2.46
RNF220-208ENST00000471494 SUSD4Q5VX71 490 aa30.43■■■□□ 2.46
RNF220-208ENST00000471494 ZNF853P0CG23 659 aa30.42■■■□□ 2.46
RNF220-208ENST00000471494 PPP1R42Q7Z4L9 355 aa30.42■■■□□ 2.46
RNF220-208ENST00000471494 TAOK3Q9H2K8 898 aa30.42■■■□□ 2.46
RNF220-208ENST00000471494 MRS2Q9HD23 443 aa30.42■■■□□ 2.46
RNF220-208ENST00000471494 DUSP27Q5VZP5 1158 aa30.41■■■□□ 2.46
RNF220-208ENST00000471494 LTBP3Q9NS15 1303 aa30.41■■■□□ 2.46
RNF220-208ENST00000471494 NTSR2O95665 410 aa30.4■■■□□ 2.46
RNF220-208ENST00000471494 HSP90AB3PQ58FF7 597 aa30.4■■■□□ 2.46
RNF220-208ENST00000471494 ALDH1B1P30837 517 aa30.39■■■□□ 2.46
RNF220-208ENST00000471494 DBF4Q9UBU7 674 aaPredicted RBP30.39■■■□□ 2.46
RNF220-208ENST00000471494 CRY2Q49AN0 593 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms