RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 TNRC6CQ9HCJ0 1690 aaKnown RBP10.76□□□□□ -0.69
TRAPPC3-206ENST00000469757 C8orf58Q8NAV2 365 aa10.75□□□□□ -0.69
TRAPPC3-206ENST00000469757 CHMP4AQ9BY43 222 aa10.75□□□□□ -0.69
TRAPPC3-206ENST00000469757 MYH16Q9H6N6 1097 aa10.75□□□□□ -0.69
TRAPPC3-206ENST00000469757 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC3-206ENST00000469757 CHPF2Q9P2E5 772 aa10.75□□□□□ -0.69
TRAPPC3-206ENST00000469757 ZNF652Q9Y2D9 606 aa10.75□□□□□ -0.69
TRAPPC3-206ENST00000469757 CACNA1FO60840 1977 aa10.75□□□□□ -0.69
TRAPPC3-206ENST00000469757 N4BP2Q86UW6 1770 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC3-206ENST00000469757 DBF4Q9UBU7 674 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC3-206ENST00000469757 TBC1D2BQ9UPU7 963 aa10.74□□□□□ -0.69
TRAPPC3-206ENST00000469757 ZNF330Q9Y3S2 320 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC3-206ENST00000469757 PARP3Q9Y6F1 533 aa10.74□□□□□ -0.69
TRAPPC3-206ENST00000469757 ARFGEF1Q9Y6D6 1849 aa10.74□□□□□ -0.69
TRAPPC3-206ENST00000469757 SENP3-EIF4A1A0A087X0R7 540 aa10.73□□□□□ -0.69
TRAPPC3-206ENST00000469757 E9PSI1 815 aa10.73□□□□□ -0.69
TRAPPC3-206ENST00000469757 MYL6BP14649 208 aa10.73□□□□□ -0.69
TRAPPC3-206ENST00000469757 TBC1D9BQ66K14 1250 aa10.73□□□□□ -0.69
TRAPPC3-206ENST00000469757 KIF6Q6ZMV9 814 aa10.73□□□□□ -0.69
TRAPPC3-206ENST00000469757 TTLL7Q6ZT98 887 aa10.73□□□□□ -0.69
TRAPPC3-206ENST00000469757 NPM2Q86SE8 214 aaKnown RBP10.73□□□□□ -0.69
TRAPPC3-206ENST00000469757 TSPYL6Q8N831 410 aa10.73□□□□□ -0.69
TRAPPC3-206ENST00000469757 NLGN2Q8NFZ4 835 aa10.73□□□□□ -0.69
TRAPPC3-206ENST00000469757 EIF2S2P20042 333 aaKnown RBP10.72□□□□□ -0.69
TRAPPC3-206ENST00000469757 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
TRAPPC3-206ENST00000469757 TWISTNBQ3B726 338 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC3-206ENST00000469757 CCDC30Q5VVM6 783 aa10.72□□□□□ -0.69
TRAPPC3-206ENST00000469757 GIGYF2Q6Y7W6 1299 aaKnown RBP10.72□□□□□ -0.69
TRAPPC3-206ENST00000469757 TRMT2AQ8IZ69 625 aaKnown RBP10.72□□□□□ -0.69
TRAPPC3-206ENST00000469757 HYPKQ9NX55 129 aa10.72□□□□□ -0.69
TRAPPC3-206ENST00000469757 RNF123Q5XPI4 1314 aa10.72□□□□□ -0.69
TRAPPC3-206ENST00000469757 ANXA1P04083 346 aa10.71□□□□□ -0.69
TRAPPC3-206ENST00000469757 TGFB2P61812 414 aa10.71□□□□□ -0.69
TRAPPC3-206ENST00000469757 HLFQ16534 295 aa10.71□□□□□ -0.69
TRAPPC3-206ENST00000469757 UBN2Q6ZU65 1347 aa10.71□□□□□ -0.69
TRAPPC3-206ENST00000469757 XAGE3Q8WTP9 111 aa10.71□□□□□ -0.69
TRAPPC3-206ENST00000469757 DDX60Q8IY21 1712 aaKnown RBP10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 ABCC12Q96J65 1359 aa10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 VAMP4O75379 141 aa10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 SERPINB2P05120 415 aa10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 SLFN5Q08AF3 891 aa10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 PRR5LQ6MZQ0 368 aa10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 ZNF34Q8IZ26 560 aa10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 CNBD1Q8NA66 436 aa10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 PLBD2Q8NHP8 589 aa10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 SETDB2Q96T68 719 aa10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 ZBTB3Q9H5J0 574 aa10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 GOLGB1Q14789 3259 aaKnown RBP10.7□□□□□ -0.7
TRAPPC3-206ENST00000469757 ADCY9O60503 1353 aa10.69□□□□□ -0.7
TRAPPC3-206ENST00000469757 ZBED9Q6R2W3 1325 aa10.69□□□□□ -0.7
TRAPPC3-206ENST00000469757 EXOSC9Q06265 439 aaKnown RBP10.69□□□□□ -0.7
TRAPPC3-206ENST00000469757 PARP10Q53GL7 1025 aa10.69□□□□□ -0.7
TRAPPC3-206ENST00000469757 COPS6Q7L5N1 327 aa10.69□□□□□ -0.7
TRAPPC3-206ENST00000469757 NECTIN2Q92692 538 aa10.69□□□□□ -0.7
TRAPPC3-206ENST00000469757 NIP7Q9Y221 180 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAPPC3-206ENST00000469757 UTRNP46939 3433 aa10.68□□□□□ -0.7
TRAPPC3-206ENST00000469757 ELL2O00472 640 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC3-206ENST00000469757 NTSR2O95665 410 aa10.68□□□□□ -0.7
TRAPPC3-206ENST00000469757 HSP90AB3PQ58FF7 597 aa10.68□□□□□ -0.7
TRAPPC3-206ENST00000469757 ZNF428Q96B54 188 aa10.68□□□□□ -0.7
TRAPPC3-206ENST00000469757 BRIP1Q9BX63 1249 aa10.68□□□□□ -0.7
TRAPPC3-206ENST00000469757 PDZRN3Q9UPQ7 1066 aa10.68□□□□□ -0.7
TRAPPC3-206ENST00000469757 KLRG2A4D1S0 409 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC3-206ENST00000469757 CT47B1P0C2W7 299 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC3-206ENST00000469757 KCNA3P22001 575 aa10.67□□□□□ -0.7
TRAPPC3-206ENST00000469757 TRIM28Q13263 835 aaKnown RBP10.67□□□□□ -0.7
TRAPPC3-206ENST00000469757 BICDL1Q6ZP65 573 aa10.67□□□□□ -0.7
TRAPPC3-206ENST00000469757 NBPF5PQ86XG9 351 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC3-206ENST00000469757 STK31Q9BXU1 1019 aa10.67□□□□□ -0.7
TRAPPC3-206ENST00000469757 NYXQ9GZU5 481 aa10.67□□□□□ -0.7
TRAPPC3-206ENST00000469757 LRRC37AA6NMS7 1700 aa10.67□□□□□ -0.7
TRAPPC3-206ENST00000469757 YBX3P16989 372 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRAPPC3-206ENST00000469757 ST5P78524 1137 aa10.66□□□□□ -0.7
TRAPPC3-206ENST00000469757 CRY2Q49AN0 593 aa10.66□□□□□ -0.7
TRAPPC3-206ENST00000469757 ANKRD13DQ6ZTN6 518 aa10.66□□□□□ -0.7
TRAPPC3-206ENST00000469757 NLRP10Q86W26 655 aa10.66□□□□□ -0.7
TRAPPC3-206ENST00000469757 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
TRAPPC3-206ENST00000469757 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
TRAPPC3-206ENST00000469757 ISCA1Q9BUE6 129 aa10.66□□□□□ -0.7
TRAPPC3-206ENST00000469757 PHAXQ9H814 394 aaKnown RBP10.66□□□□□ -0.7
TRAPPC3-206ENST00000469757 SNED1Q8TER0 1413 aa10.66□□□□□ -0.7
TRAPPC3-206ENST00000469757 DDX58O95786 925 aaKnown RBP10.65□□□□□ -0.7
TRAPPC3-206ENST00000469757 DPEP1P16444 411 aa10.65□□□□□ -0.7
TRAPPC3-206ENST00000469757 PDE6BP35913 854 aa10.65□□□□□ -0.7
TRAPPC3-206ENST00000469757 HNRNPUQ00839 825 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRAPPC3-206ENST00000469757 AIMP1Q12904 312 aaKnown RBP10.65□□□□□ -0.7
TRAPPC3-206ENST00000469757 FLIIQ13045 1269 aa10.65□□□□□ -0.7
TRAPPC3-206ENST00000469757 TCIRG1Q13488 830 aa10.65□□□□□ -0.7
TRAPPC3-206ENST00000469757 TPTE2Q6XPS3 522 aa10.65□□□□□ -0.7
TRAPPC3-206ENST00000469757 CHD4Q14839 1912 aa10.64□□□□□ -0.71
TRAPPC3-206ENST00000469757 CACNA1SQ13698 1873 aa10.64□□□□□ -0.71
TRAPPC3-206ENST00000469757 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
TRAPPC3-206ENST00000469757 GPTP24298 496 aa10.64□□□□□ -0.71
TRAPPC3-206ENST00000469757 SUSD4Q5VX71 490 aa10.64□□□□□ -0.71
TRAPPC3-206ENST00000469757 KSR2Q6VAB6 950 aa10.64□□□□□ -0.71
TRAPPC3-206ENST00000469757 PPP1R42Q7Z4L9 355 aa10.64□□□□□ -0.71
TRAPPC3-206ENST00000469757 METTL22Q9BUU2 404 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC3-206ENST00000469757 FER1L6Q2WGJ9 1857 aa10.64□□□□□ -0.71
TRAPPC3-206ENST00000469757 A0A0G2JLW4 131 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms