RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 CHL1O00533 1208 aa23.91■■□□□ 1.42
PHGDH-204ENST00000469443 CNBD1Q8NA66 436 aa23.91■■□□□ 1.42
PHGDH-204ENST00000469443 PDZRN3Q9UPQ7 1066 aa23.91■■□□□ 1.42
PHGDH-204ENST00000469443 MYL6BP14649 208 aa23.9■■□□□ 1.42
PHGDH-204ENST00000469443 NGEFQ8N5V2 710 aa23.9■■□□□ 1.42
PHGDH-204ENST00000469443 APAF1O14727 1248 aa23.89■■□□□ 1.41
PHGDH-204ENST00000469443 NPHP1O15259 732 aa23.89■■□□□ 1.41
PHGDH-204ENST00000469443 PDE6BP35913 854 aa23.89■■□□□ 1.41
PHGDH-204ENST00000469443 ST5P78524 1137 aa23.89■■□□□ 1.41
PHGDH-204ENST00000469443 HLFQ16534 295 aa23.89■■□□□ 1.41
PHGDH-204ENST00000469443 CCDC184Q52MB2 194 aa23.89■■□□□ 1.41
PHGDH-204ENST00000469443 CCDC24Q8N4L8 307 aa23.89■■□□□ 1.41
PHGDH-204ENST00000469443 NIP7Q9Y221 180 aaKnown RBP eCLIP23.89■■□□□ 1.41
PHGDH-204ENST00000469443 LAS1LQ9Y4W2 734 aaKnown RBP23.89■■□□□ 1.41
PHGDH-204ENST00000469443 CCDC88AQ3V6T2 1871 aa23.89■■□□□ 1.41
PHGDH-204ENST00000469443 ARFGEF2Q9Y6D5 1785 aa23.88■■□□□ 1.41
PHGDH-204ENST00000469443 ERVV-1B6SEH8 477 aa23.88■■□□□ 1.41
PHGDH-204ENST00000469443 MAP3K15Q6ZN16 1313 aa23.87■■□□□ 1.41
PHGDH-204ENST00000469443 ANP32CO43423 234 aa23.87■■□□□ 1.41
PHGDH-204ENST00000469443 EIF2S2P20042 333 aaKnown RBP23.87■■□□□ 1.41
PHGDH-204ENST00000469443 KIF6Q6ZMV9 814 aa23.87■■□□□ 1.41
PHGDH-204ENST00000469443 TTLL7Q6ZT98 887 aa23.87■■□□□ 1.41
PHGDH-204ENST00000469443 NBPF5PQ86XG9 351 aaPredicted RBP23.87■■□□□ 1.41
PHGDH-204ENST00000469443 TTLL6Q8N841 843 aa23.87■■□□□ 1.41
PHGDH-204ENST00000469443 PDIA6Q15084 440 aa23.85■■□□□ 1.41
PHGDH-204ENST00000469443 CFAP44Q96MT7 982 aa23.85■■□□□ 1.41
PHGDH-204ENST00000469443 ANKRD36CQ5JPF3 1778 aa23.85■■□□□ 1.41
PHGDH-204ENST00000469443 TPTE2Q6XPS3 522 aa23.84■■□□□ 1.41
PHGDH-204ENST00000469443 ZNF622Q969S3 477 aaKnown RBP eCLIP23.84■■□□□ 1.41
PHGDH-204ENST00000469443 SLX4Q8IY92 1834 aa23.83■■□□□ 1.41
PHGDH-204ENST00000469443 KRT24Q2M2I5 525 aa23.83■■□□□ 1.41
PHGDH-204ENST00000469443 LRP10Q7Z4F1 713 aa23.83■■□□□ 1.41
PHGDH-204ENST00000469443 ZBTB3Q9H5J0 574 aa23.83■■□□□ 1.41
PHGDH-204ENST00000469443 FER1L6Q2WGJ9 1857 aa23.82■■□□□ 1.4
PHGDH-204ENST00000469443 GPBP1L1Q9HC44 474 aaPredicted RBP23.82■■□□□ 1.4
PHGDH-204ENST00000469443 FAM177BA6PVY3 158 aa23.81■■□□□ 1.4
PHGDH-204ENST00000469443 CALD1Q05682 793 aaKnown RBP23.81■■□□□ 1.4
PHGDH-204ENST00000469443 PROSER3Q2NL68 480 aa23.81■■□□□ 1.4
PHGDH-204ENST00000469443 ZNF526Q8TF50 670 aaPredicted RBP23.81■■□□□ 1.4
PHGDH-204ENST00000469443 NECTIN2Q92692 538 aa23.81■■□□□ 1.4
PHGDH-204ENST00000469443 MRS2Q9HD23 443 aa23.81■■□□□ 1.4
PHGDH-204ENST00000469443 ANXA1P04083 346 aa23.8■■□□□ 1.4
PHGDH-204ENST00000469443 HOXB7P09629 217 aa23.8■■□□□ 1.4
PHGDH-204ENST00000469443 ZNF853P0CG23 659 aa23.8■■□□□ 1.4
PHGDH-204ENST00000469443 SRGNP10124 158 aa23.8■■□□□ 1.4
PHGDH-204ENST00000469443 C9orf131Q5VYM1 1079 aa23.8■■□□□ 1.4
PHGDH-204ENST00000469443 STYK1Q6J9G0 422 aa23.8■■□□□ 1.4
PHGDH-204ENST00000469443 GIGYF2Q6Y7W6 1299 aaKnown RBP23.8■■□□□ 1.4
PHGDH-204ENST00000469443 MBIPQ9NS73 344 aa23.8■■□□□ 1.4
PHGDH-204ENST00000469443 TNRC6CQ9HCJ0 1690 aaKnown RBP23.79■■□□□ 1.4
PHGDH-204ENST00000469443 DICER1Q9UPY3 1922 aaKnown RBP23.79■■□□□ 1.4
PHGDH-204ENST00000469443 GNAI1P63096 354 aa23.79■■□□□ 1.4
PHGDH-204ENST00000469443 MASTLQ96GX5 879 aa23.79■■□□□ 1.4
PHGDH-204ENST00000469443 NYXQ9GZU5 481 aa23.79■■□□□ 1.4
PHGDH-204ENST00000469443 DDX21Q9NR30 783 aaKnown RBP eCLIP23.79■■□□□ 1.4
PHGDH-204ENST00000469443 IFT57Q9NWB7 429 aa23.79■■□□□ 1.4
PHGDH-204ENST00000469443 CNKSR1Q969H4 720 aa23.78■■□□□ 1.4
PHGDH-204ENST00000469443 IBTKQ9P2D0 1353 aaPredicted RBP23.78■■□□□ 1.4
PHGDH-204ENST00000469443 GPTP24298 496 aa23.77■■□□□ 1.4
PHGDH-204ENST00000469443 GTF2E1P29083 439 aaPredicted RBP23.77■■□□□ 1.4
PHGDH-204ENST00000469443 C1QTNF8P60827 252 aa23.77■■□□□ 1.4
PHGDH-204ENST00000469443 HDGFL1Q5TGJ6 251 aa23.77■■□□□ 1.4
PHGDH-204ENST00000469443 ZNF34Q8IZ26 560 aa23.77■■□□□ 1.4
PHGDH-204ENST00000469443 RNF181Q9P0P0 153 aa23.77■■□□□ 1.4
PHGDH-204ENST00000469443 KLRG2A4D1S0 409 aaPredicted RBP23.76■■□□□ 1.39
PHGDH-204ENST00000469443 RASSF7Q02833 373 aa23.76■■□□□ 1.39
PHGDH-204ENST00000469443 UBN2Q6ZU65 1347 aa23.76■■□□□ 1.39
PHGDH-204ENST00000469443 TIAM2Q8IVF5 1701 aa23.76■■□□□ 1.39
PHGDH-204ENST00000469443 DUSP27Q5VZP5 1158 aa23.75■■□□□ 1.39
PHGDH-204ENST00000469443 COPS6Q7L5N1 327 aa23.75■■□□□ 1.39
PHGDH-204ENST00000469443 XAGE3Q8WTP9 111 aa23.75■■□□□ 1.39
PHGDH-204ENST00000469443 CHPF2Q9P2E5 772 aa23.75■■□□□ 1.39
PHGDH-204ENST00000469443 C21orf2O43822 256 aa23.74■■□□□ 1.39
PHGDH-204ENST00000469443 NPR1P16066 1061 aa23.74■■□□□ 1.39
PHGDH-204ENST00000469443 AIMP1Q12904 312 aaKnown RBP23.74■■□□□ 1.39
PHGDH-204ENST00000469443 NUTM1Q86Y26 1132 aa23.74■■□□□ 1.39
PHGDH-204ENST00000469443 ABCC12Q96J65 1359 aa23.74■■□□□ 1.39
PHGDH-204ENST00000469443 RIC1Q4ADV7 1423 aa23.74■■□□□ 1.39
PHGDH-204ENST00000469443 NFKBIEO00221 500 aa23.73■■□□□ 1.39
PHGDH-204ENST00000469443 CCDC27Q2M243 656 aa23.73■■□□□ 1.39
PHGDH-204ENST00000469443 PARP10Q53GL7 1025 aa23.73■■□□□ 1.39
PHGDH-204ENST00000469443 SUSD4Q5VX71 490 aa23.73■■□□□ 1.39
PHGDH-204ENST00000469443 PRPF40BQ6NWY9 871 aaKnown RBP23.73■■□□□ 1.39
PHGDH-204ENST00000469443 ZNF219Q9P2Y4 722 aaPredicted RBP23.73■■□□□ 1.39
PHGDH-204ENST00000469443 LMNB1P20700 586 aa23.72■■□□□ 1.39
PHGDH-204ENST00000469443 ERFEQ4G0M1 354 aa23.72■■□□□ 1.39
PHGDH-204ENST00000469443 DBF4Q9UBU7 674 aaPredicted RBP23.72■■□□□ 1.39
PHGDH-204ENST00000469443 NTSR2O95665 410 aa23.71■■□□□ 1.39
PHGDH-204ENST00000469443 HSP90AB3PQ58FF7 597 aa23.71■■□□□ 1.39
PHGDH-204ENST00000469443 PPP1R42Q7Z4L9 355 aa23.71■■□□□ 1.39
PHGDH-204ENST00000469443 ZC3H4Q9UPT8 1303 aaKnown RBP23.7■■□□□ 1.38
PHGDH-204ENST00000469443 PRELPP51888 382 aa23.7■■□□□ 1.38
PHGDH-204ENST00000469443 SOGA3Q5TF21 947 aa23.7■■□□□ 1.38
PHGDH-204ENST00000469443 LAMB2P55268 1798 aa23.7■■□□□ 1.38
PHGDH-204ENST00000469443 NCBP3Q53F19 620 aaKnown RBP23.69■■□□□ 1.38
PHGDH-204ENST00000469443 LTBP3Q9NS15 1303 aa23.68■■□□□ 1.38
PHGDH-204ENST00000469443 SENP3-EIF4A1A0A087X0R7 540 aa23.68■■□□□ 1.38
PHGDH-204ENST00000469443 KIF3CO14782 793 aa23.68■■□□□ 1.38
PHGDH-204ENST00000469443 CRY2Q49AN0 593 aa23.68■■□□□ 1.38
PHGDH-204ENST00000469443 WWC1Q8IX03 1113 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms