RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 KIF13BQ9NQT8 1826 aa14.69□□□□□ -0.06
COL4A6-205ENST00000468338 PRAMEF22A3QJZ6 481 aa14.68□□□□□ -0.06
COL4A6-205ENST00000468338 CANXP27824 592 aaKnown RBP14.68□□□□□ -0.06
COL4A6-205ENST00000468338 TM4SF1P30408 202 aa14.68□□□□□ -0.06
COL4A6-205ENST00000468338 CCDC184Q52MB2 194 aa14.68□□□□□ -0.06
COL4A6-205ENST00000468338 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
COL4A6-205ENST00000468338 CCDC146Q8IYE0 955 aa14.68□□□□□ -0.06
COL4A6-205ENST00000468338 BCL2L12Q9HB09 334 aa14.68□□□□□ -0.06
COL4A6-205ENST00000468338 BABAM1Q9NWV8 329 aa14.68□□□□□ -0.06
COL4A6-205ENST00000468338 A1BGP04217 495 aa14.67□□□□□ -0.06
COL4A6-205ENST00000468338 EIF4A1P60842 406 aaKnown RBP14.67□□□□□ -0.06
COL4A6-205ENST00000468338 LMOD3Q0VAK6 560 aa14.67□□□□□ -0.06
COL4A6-205ENST00000468338 TRIM35Q9UPQ4 493 aa14.67□□□□□ -0.06
COL4A6-205ENST00000468338 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
COL4A6-205ENST00000468338 ZPR1O75312 459 aa14.66□□□□□ -0.06
COL4A6-205ENST00000468338 GIGYF1O75420 1035 aaPredicted RBP14.66□□□□□ -0.06
COL4A6-205ENST00000468338 DDR1Q08345 913 aa14.66□□□□□ -0.06
COL4A6-205ENST00000468338 USPL1Q5W0Q7 1092 aa14.66□□□□□ -0.06
COL4A6-205ENST00000468338 UTRNP46939 3433 aa14.65□□□□□ -0.06
COL4A6-205ENST00000468338 A0A087WZG4 1122 aa14.65□□□□□ -0.06
COL4A6-205ENST00000468338 RRP7AQ9Y3A4 280 aaKnown RBP14.65□□□□□ -0.06
COL4A6-205ENST00000468338 C10orf71Q711Q0 1435 aa14.65□□□□□ -0.06
COL4A6-205ENST00000468338 POLRMTO00411 1230 aaKnown RBP14.64□□□□□ -0.07
COL4A6-205ENST00000468338 ANP32CO43423 234 aa14.64□□□□□ -0.07
COL4A6-205ENST00000468338 PARP3Q9Y6F1 533 aa14.64□□□□□ -0.07
COL4A6-205ENST00000468338 KIAA1551Q9HCM1 1747 aa14.63□□□□□ -0.07
COL4A6-205ENST00000468338 LAMB4A4D0S4 1761 aa14.63□□□□□ -0.07
COL4A6-205ENST00000468338 NBPF26B4DH59 902 aa14.63□□□□□ -0.07
COL4A6-205ENST00000468338 CHL1O00533 1208 aa14.63□□□□□ -0.07
COL4A6-205ENST00000468338 TGFB2P61812 414 aa14.63□□□□□ -0.07
COL4A6-205ENST00000468338 NFIXQ14938 502 aa14.63□□□□□ -0.07
COL4A6-205ENST00000468338 NBPF10Q6P3W6 841 aaKnown RBP14.63□□□□□ -0.07
COL4A6-205ENST00000468338 NBPF15Q8N660 670 aa14.63□□□□□ -0.07
COL4A6-205ENST00000468338 CHD4Q14839 1912 aa14.62□□□□□ -0.07
COL4A6-205ENST00000468338 APAF1O14727 1248 aa14.62□□□□□ -0.07
COL4A6-205ENST00000468338 CAMTA2O94983 1202 aa14.62□□□□□ -0.07
COL4A6-205ENST00000468338 YBX3P16989 372 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL4A6-205ENST00000468338 NEUROD2Q15784 382 aa14.62□□□□□ -0.07
COL4A6-205ENST00000468338 GPR162Q16538 588 aa14.62□□□□□ -0.07
COL4A6-205ENST00000468338 NRXN2Q9P2S2 1712 aa14.62□□□□□ -0.07
COL4A6-205ENST00000468338 TSPYL4Q9UJ04 414 aa14.62□□□□□ -0.07
COL4A6-205ENST00000468338 PCDHB8Q9UN66 801 aa14.62□□□□□ -0.07
COL4A6-205ENST00000468338 PCDHB13Q9Y5F0 798 aa14.62□□□□□ -0.07
COL4A6-205ENST00000468338 AFDNP55196 1824 aaKnown RBP14.62□□□□□ -0.07
COL4A6-205ENST00000468338 SCN7AQ01118 1682 aa14.61□□□□□ -0.07
COL4A6-205ENST00000468338 TBC1D2BQ9UPU7 963 aa14.61□□□□□ -0.07
COL4A6-205ENST00000468338 PXDNLA1KZ92 1463 aa14.61□□□□□ -0.07
COL4A6-205ENST00000468338 PIP4K2AP48426 406 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-205ENST00000468338 PSEN1P49768 467 aa14.6□□□□□ -0.07
COL4A6-205ENST00000468338 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
COL4A6-205ENST00000468338 BCORQ6W2J9 1755 aa14.6□□□□□ -0.07
COL4A6-205ENST00000468338 GOLGB1Q14789 3259 aaKnown RBP14.6□□□□□ -0.07
COL4A6-205ENST00000468338 GRIN3BO60391 1043 aa14.59□□□□□ -0.07
COL4A6-205ENST00000468338 ZNF853P0CG23 659 aa14.59□□□□□ -0.07
COL4A6-205ENST00000468338 CLEC4GQ6UXB4 293 aa14.59□□□□□ -0.07
COL4A6-205ENST00000468338 DZIP3Q86Y13 1208 aaKnown RBP14.59□□□□□ -0.07
COL4A6-205ENST00000468338 ERBB4Q15303 1308 aa14.59□□□□□ -0.07
COL4A6-205ENST00000468338 BRCA1P38398 1863 aaKnown RBP14.59□□□□□ -0.07
COL4A6-205ENST00000468338 N4BP2Q86UW6 1770 aaPredicted RBP14.58□□□□□ -0.08
COL4A6-205ENST00000468338 SERPINB2P05120 415 aa14.58□□□□□ -0.08
COL4A6-205ENST00000468338 KCNA3P22001 575 aa14.58□□□□□ -0.08
COL4A6-205ENST00000468338 TBC1D9BQ66K14 1250 aa14.58□□□□□ -0.08
COL4A6-205ENST00000468338 MRS2Q9HD23 443 aa14.58□□□□□ -0.08
COL4A6-205ENST00000468338 ZNF330Q9Y3S2 320 aaPredicted RBP14.58□□□□□ -0.08
COL4A6-205ENST00000468338 DPEP1P16444 411 aa14.57□□□□□ -0.08
COL4A6-205ENST00000468338 YY1P25490 414 aa14.57□□□□□ -0.08
COL4A6-205ENST00000468338 LRP10Q7Z4F1 713 aa14.57□□□□□ -0.08
COL4A6-205ENST00000468338 NPM2Q86SE8 214 aaKnown RBP14.57□□□□□ -0.08
COL4A6-205ENST00000468338 A0A0G2JLW4 131 aa14.56□□□□□ -0.08
COL4A6-205ENST00000468338 PDIA6Q15084 440 aa14.56□□□□□ -0.08
COL4A6-205ENST00000468338 CCDC27Q2M243 656 aa14.56□□□□□ -0.08
COL4A6-205ENST00000468338 ERVV-1B6SEH8 477 aa14.55□□□□□ -0.08
COL4A6-205ENST00000468338 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
COL4A6-205ENST00000468338 CARMIL3Q8ND23 1372 aa14.55□□□□□ -0.08
COL4A6-205ENST00000468338 HOXB7P09629 217 aa14.54□□□□□ -0.08
COL4A6-205ENST00000468338 KRT24Q2M2I5 525 aa14.54□□□□□ -0.08
COL4A6-205ENST00000468338 BICDL1Q6ZP65 573 aa14.54□□□□□ -0.08
COL4A6-205ENST00000468338 KCNV2Q8TDN2 545 aa14.54□□□□□ -0.08
COL4A6-205ENST00000468338 SETDB2Q96T68 719 aa14.54□□□□□ -0.08
COL4A6-205ENST00000468338 MBIPQ9NS73 344 aa14.54□□□□□ -0.08
COL4A6-205ENST00000468338 IFT57Q9NWB7 429 aa14.54□□□□□ -0.08
COL4A6-205ENST00000468338 TULP1O00294 542 aaPredicted RBP14.53□□□□□ -0.08
COL4A6-205ENST00000468338 CALD1Q05682 793 aaKnown RBP14.53□□□□□ -0.08
COL4A6-205ENST00000468338 HLFQ16534 295 aa14.53□□□□□ -0.08
COL4A6-205ENST00000468338 PRR5LQ6MZQ0 368 aa14.53□□□□□ -0.08
COL4A6-205ENST00000468338 MFRPQ9BY79 579 aa14.53□□□□□ -0.08
COL4A6-205ENST00000468338 ZNF652Q9Y2D9 606 aa14.53□□□□□ -0.08
COL4A6-205ENST00000468338 ANKRD31Q8N7Z5 1873 aa14.52□□□□□ -0.08
COL4A6-205ENST00000468338 NUP98P52948 1817 aa14.52□□□□□ -0.08
COL4A6-205ENST00000468338 ARFGEF1Q9Y6D6 1849 aa14.52□□□□□ -0.08
COL4A6-205ENST00000468338 MAP3K15Q6ZN16 1313 aa14.52□□□□□ -0.08
COL4A6-205ENST00000468338 PRKAR2AP13861 404 aaKnown RBP14.52□□□□□ -0.09
COL4A6-205ENST00000468338 GNAI1P63096 354 aa14.52□□□□□ -0.09
COL4A6-205ENST00000468338 TTLL7Q6ZT98 887 aa14.52□□□□□ -0.09
COL4A6-205ENST00000468338 BRIP1Q9BX63 1249 aa14.52□□□□□ -0.09
COL4A6-205ENST00000468338 PIM2Q9P1W9 311 aa14.52□□□□□ -0.09
COL4A6-205ENST00000468338 LAS1LQ9Y4W2 734 aaKnown RBP14.52□□□□□ -0.09
COL4A6-205ENST00000468338 EIF2S2P20042 333 aaKnown RBP14.51□□□□□ -0.09
COL4A6-205ENST00000468338 CHRNA5P30532 468 aa14.51□□□□□ -0.09
COL4A6-205ENST00000468338 PROSER3Q2NL68 480 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms