RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 RC3H1Q5TC82 1133 aaKnown RBP8.72□□□□□ -1.01
SCAF4-204ENST00000467731 ILDR2Q71H61 639 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 CCDC125Q86Z20 511 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 PI4KAP1Q8N8J0 262 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 PANK1Q8TE04 598 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 ADCY9O60503 1353 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 TUBGCP6Q96RT7 1819 aa8.71□□□□□ -1.01
SCAF4-204ENST00000467731 SMIM5Q71RC9 77 aa8.71□□□□□ -1.01
SCAF4-204ENST00000467731 NPM2Q86SE8 214 aaKnown RBP8.71□□□□□ -1.01
SCAF4-204ENST00000467731 AMIGO3Q86WK7 504 aa8.71□□□□□ -1.01
SCAF4-204ENST00000467731 DZIP1LQ8IYY4 767 aaKnown RBP8.71□□□□□ -1.01
SCAF4-204ENST00000467731 API5Q9BZZ5 524 aaKnown RBP8.71□□□□□ -1.01
SCAF4-204ENST00000467731 C4AP0C0L4 1744 aa8.71□□□□□ -1.01
SCAF4-204ENST00000467731 COL15A1P39059 1388 aa8.71□□□□□ -1.01
SCAF4-204ENST00000467731 NUP98P52948 1817 aa8.71□□□□□ -1.02
SCAF4-204ENST00000467731 N4BP2Q86UW6 1770 aaPredicted RBP8.71□□□□□ -1.02
SCAF4-204ENST00000467731 PDE4CQ08493 712 aa8.71□□□□□ -1.02
SCAF4-204ENST00000467731 PDE3AQ14432 1141 aa8.71□□□□□ -1.02
SCAF4-204ENST00000467731 AK7Q96M32 723 aa8.71□□□□□ -1.02
SCAF4-204ENST00000467731 ABCC4O15439 1325 aa8.71□□□□□ -1.02
SCAF4-204ENST00000467731 DDX58O95786 925 aaKnown RBP8.7□□□□□ -1.02
SCAF4-204ENST00000467731 SLC4A10Q6U841 1118 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 KSR2Q6VAB6 950 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 ANKRD13DQ6ZTN6 518 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 UPF1Q92900 1129 aaKnown RBP eCLIP8.7□□□□□ -1.02
SCAF4-204ENST00000467731 MAP3K2Q9Y2U5 619 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 RTCBQ9Y3I0 505 aaKnown RBP8.7□□□□□ -1.02
SCAF4-204ENST00000467731 RPS6KA4O75676 772 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 DNAAF4Q8WXU2 420 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 ZBTB3Q9H5J0 574 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 TBC1D2BQ9UPU7 963 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 AFDNP55196 1824 aaKnown RBP8.7□□□□□ -1.02
SCAF4-204ENST00000467731 BCORQ6W2J9 1755 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 ZNF827Q17R98 1081 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 DZIP3Q86Y13 1208 aaKnown RBP8.7□□□□□ -1.02
SCAF4-204ENST00000467731 TMEM57Q8N5G2 664 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 COG6Q9Y2V7 657 aa8.7□□□□□ -1.02
SCAF4-204ENST00000467731 PHF14O94880 888 aa8.69□□□□□ -1.02
SCAF4-204ENST00000467731 MS4A1P11836 297 aa8.69□□□□□ -1.02
SCAF4-204ENST00000467731 KIF6Q6ZMV9 814 aa8.69□□□□□ -1.02
SCAF4-204ENST00000467731 PLBD2Q8NHP8 589 aa8.69□□□□□ -1.02
SCAF4-204ENST00000467731 ANKRD36CQ5JPF3 1778 aa8.69□□□□□ -1.02
SCAF4-204ENST00000467731 PXDNLA1KZ92 1463 aa8.69□□□□□ -1.02
SCAF4-204ENST00000467731 HMGB2P26583 209 aaKnown RBP8.69□□□□□ -1.02
SCAF4-204ENST00000467731 AKT1S1Q96B36 256 aa8.69□□□□□ -1.02
SCAF4-204ENST00000467731 MAP3K15Q6ZN16 1313 aa8.69□□□□□ -1.02
SCAF4-204ENST00000467731 SCN7AQ01118 1682 aa8.68□□□□□ -1.02
SCAF4-204ENST00000467731 ITPRIPQ8IWB1 547 aa8.68□□□□□ -1.02
SCAF4-204ENST00000467731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.68□□□□□ -1.02
SCAF4-204ENST00000467731 MVPQ14764 893 aaKnown RBP8.68□□□□□ -1.02
SCAF4-204ENST00000467731 HLFQ16534 295 aa8.68□□□□□ -1.02
SCAF4-204ENST00000467731 ARHGEF1Q92888 912 aaKnown RBP8.68□□□□□ -1.02
SCAF4-204ENST00000467731 CRBNQ96SW2 442 aa8.68□□□□□ -1.02
SCAF4-204ENST00000467731 METTL22Q9BUU2 404 aaPredicted RBP8.68□□□□□ -1.02
SCAF4-204ENST00000467731 TFCP2L1Q9NZI6 479 aa8.68□□□□□ -1.02
SCAF4-204ENST00000467731 SRCAPQ6ZRS2 3230 aa8.68□□□□□ -1.02
SCAF4-204ENST00000467731 SSFA2P28290 1259 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 FKBP8Q14318 412 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 TRAPPC3LQ5T215 181 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 BEND3Q5T5X7 828 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 INTS3Q68E01 1043 aaKnown RBP8.67□□□□□ -1.02
SCAF4-204ENST00000467731 MYD88Q99836 296 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 GOLGB1Q14789 3259 aaKnown RBP8.67□□□□□ -1.02
SCAF4-204ENST00000467731 A0A087WZG4 1122 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 CAMTA2O94983 1202 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 DEKP35659 375 aaKnown RBP8.67□□□□□ -1.02
SCAF4-204ENST00000467731 CWF19L2Q2TBE0 894 aaKnown RBP8.67□□□□□ -1.02
SCAF4-204ENST00000467731 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
SCAF4-204ENST00000467731 ATP10DQ9P241 1426 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 ERVV-1B6SEH8 477 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 IGKV5-2P06315 115 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 ADRA2BP18089 450 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 CCT4P50991 539 aaKnown RBP8.67□□□□□ -1.02
SCAF4-204ENST00000467731 NEXNQ0ZGT2 675 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 EXOC6Q8TAG9 804 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 SRCIN1Q9C0H9 1055 aa8.67□□□□□ -1.02
SCAF4-204ENST00000467731 SRP68Q9UHB9 627 aaKnown RBP8.67□□□□□ -1.02
SCAF4-204ENST00000467731 QSER1Q2KHR3 1735 aa8.66□□□□□ -1.02
SCAF4-204ENST00000467731 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
SCAF4-204ENST00000467731 RFC4P35249 363 aa8.66□□□□□ -1.02
SCAF4-204ENST00000467731 SLC15A2Q16348 729 aa8.66□□□□□ -1.02
SCAF4-204ENST00000467731 NARFQ9UHQ1 456 aa8.66□□□□□ -1.02
SCAF4-204ENST00000467731 ZPR1O75312 459 aa8.66□□□□□ -1.02
SCAF4-204ENST00000467731 USPL1Q5W0Q7 1092 aa8.66□□□□□ -1.02
SCAF4-204ENST00000467731 LINS1Q8NG48 757 aa8.66□□□□□ -1.02
SCAF4-204ENST00000467731 DDX19BQ9UMR2 479 aa8.66□□□□□ -1.02
SCAF4-204ENST00000467731 USP42Q9H9J4 1324 aaKnown RBP8.66□□□□□ -1.02
SCAF4-204ENST00000467731 NEURL1BA8MQ27 555 aa8.65□□□□□ -1.02
SCAF4-204ENST00000467731 TCIRG1Q13488 830 aa8.65□□□□□ -1.02
SCAF4-204ENST00000467731 STK32BQ9NY57 414 aa8.65□□□□□ -1.02
SCAF4-204ENST00000467731 PNPLA7Q6ZV29 1317 aa8.65□□□□□ -1.02
SCAF4-204ENST00000467731 GPTP24298 496 aa8.65□□□□□ -1.02
SCAF4-204ENST00000467731 BCL2L12Q9HB09 334 aa8.65□□□□□ -1.02
SCAF4-204ENST00000467731 ZBTB7BO15156 539 aaPredicted RBP8.64□□□□□ -1.03
SCAF4-204ENST00000467731 HSP90AB3PQ58FF7 597 aa8.64□□□□□ -1.03
SCAF4-204ENST00000467731 CLEC4GQ6UXB4 293 aa8.64□□□□□ -1.03
SCAF4-204ENST00000467731 COL23A1Q86Y22 540 aaPredicted RBP8.64□□□□□ -1.03
SCAF4-204ENST00000467731 MEIS3Q99687 375 aa8.64□□□□□ -1.03
SCAF4-204ENST00000467731 ZNF652Q9Y2D9 606 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms