RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 BRIP1Q9BX63 1249 aa15.64■□□□□ 0.09
CTNS-205ENST00000467663 PDZRN3Q9UPQ7 1066 aa15.64■□□□□ 0.09
CTNS-205ENST00000467663 ZNF652Q9Y2D9 606 aa15.64■□□□□ 0.09
CTNS-205ENST00000467663 ARFGEF1Q9Y6D6 1849 aa15.64■□□□□ 0.09
CTNS-205ENST00000467663 BCORQ6W2J9 1755 aa15.63■□□□□ 0.09
CTNS-205ENST00000467663 H0YIN7 160 aa15.63■□□□□ 0.09
CTNS-205ENST00000467663 C2CD5Q86YS7 1000 aa15.63■□□□□ 0.09
CTNS-205ENST00000467663 GPBP1L1Q9HC44 474 aaPredicted RBP15.63■□□□□ 0.09
CTNS-205ENST00000467663 TSPYL4Q9UJ04 414 aa15.63■□□□□ 0.09
CTNS-205ENST00000467663 PDE6BP35913 854 aa15.62■□□□□ 0.09
CTNS-205ENST00000467663 CALD1Q05682 793 aaKnown RBP15.62■□□□□ 0.09
CTNS-205ENST00000467663 GOLGA2Q08379 1002 aa15.62■□□□□ 0.09
CTNS-205ENST00000467663 TTLL6Q8N841 843 aa15.62■□□□□ 0.09
CTNS-205ENST00000467663 CNBD1Q8NA66 436 aa15.62■□□□□ 0.09
CTNS-205ENST00000467663 RRP7AQ9Y3A4 280 aaKnown RBP15.62■□□□□ 0.09
CTNS-205ENST00000467663 LAMB4A4D0S4 1761 aa15.62■□□□□ 0.09
CTNS-205ENST00000467663 TRIM35Q9UPQ4 493 aa15.61■□□□□ 0.09
CTNS-205ENST00000467663 NEUROD2Q15784 382 aa15.6■□□□□ 0.09
CTNS-205ENST00000467663 HLFQ16534 295 aa15.6■□□□□ 0.09
CTNS-205ENST00000467663 C9orf131Q5VYM1 1079 aa15.6■□□□□ 0.09
CTNS-205ENST00000467663 WWC1Q8IX03 1113 aa15.6■□□□□ 0.09
CTNS-205ENST00000467663 CCDC24Q8N4L8 307 aa15.6■□□□□ 0.09
CTNS-205ENST00000467663 IL16Q14005 1332 aa15.6■□□□□ 0.09
CTNS-205ENST00000467663 ERBB4Q15303 1308 aa15.6■□□□□ 0.09
CTNS-205ENST00000467663 DLEC1Q9Y238 1755 aa15.59■□□□□ 0.09
CTNS-205ENST00000467663 ERVV-1B6SEH8 477 aa15.59■□□□□ 0.09
CTNS-205ENST00000467663 E9PSI1 815 aa15.59■□□□□ 0.09
CTNS-205ENST00000467663 CHL1O00533 1208 aa15.59■□□□□ 0.09
CTNS-205ENST00000467663 ST5P78524 1137 aa15.59■□□□□ 0.09
CTNS-205ENST00000467663 NBPF5PQ86XG9 351 aaPredicted RBP15.59■□□□□ 0.09
CTNS-205ENST00000467663 ZNF526Q8TF50 670 aaPredicted RBP15.59■□□□□ 0.09
CTNS-205ENST00000467663 NIP7Q9Y221 180 aaKnown RBP eCLIP15.59■□□□□ 0.09
CTNS-205ENST00000467663 ANKRD31Q8N7Z5 1873 aa15.59■□□□□ 0.09
CTNS-205ENST00000467663 NPHP1O15259 732 aa15.58■□□□□ 0.08
CTNS-205ENST00000467663 TPTE2Q6XPS3 522 aa15.58■□□□□ 0.08
CTNS-205ENST00000467663 KLRG2A4D1S0 409 aaPredicted RBP15.57■□□□□ 0.08
CTNS-205ENST00000467663 SRGNP10124 158 aa15.57■□□□□ 0.08
CTNS-205ENST00000467663 MYL6BP14649 208 aa15.57■□□□□ 0.08
CTNS-205ENST00000467663 PDIA6Q15084 440 aa15.57■□□□□ 0.08
CTNS-205ENST00000467663 STYK1Q6J9G0 422 aa15.57■□□□□ 0.08
CTNS-205ENST00000467663 TTLL7Q6ZT98 887 aa15.57■□□□□ 0.08
CTNS-205ENST00000467663 ZNF622Q969S3 477 aaKnown RBP eCLIP15.57■□□□□ 0.08
CTNS-205ENST00000467663 MAP3K15Q6ZN16 1313 aa15.57■□□□□ 0.08
CTNS-205ENST00000467663 SLFN5Q08AF3 891 aa15.56■□□□□ 0.08
CTNS-205ENST00000467663 LRP10Q7Z4F1 713 aa15.56■□□□□ 0.08
CTNS-205ENST00000467663 RNF181Q9P0P0 153 aa15.56■□□□□ 0.08
CTNS-205ENST00000467663 SALL2Q9Y467 1007 aaPredicted RBP15.56■□□□□ 0.08
CTNS-205ENST00000467663 KIF3CO14782 793 aa15.55■□□□□ 0.08
CTNS-205ENST00000467663 EIF2S2P20042 333 aaKnown RBP15.55■□□□□ 0.08
CTNS-205ENST00000467663 RASSF7Q02833 373 aa15.55■□□□□ 0.08
CTNS-205ENST00000467663 KIF6Q6ZMV9 814 aa15.55■□□□□ 0.08
CTNS-205ENST00000467663 TRMT2AQ8IZ69 625 aaKnown RBP15.55■□□□□ 0.08
CTNS-205ENST00000467663 CNKSR1Q969H4 720 aa15.55■□□□□ 0.08
CTNS-205ENST00000467663 MASTLQ96GX5 879 aa15.55■□□□□ 0.08
CTNS-205ENST00000467663 MYH16Q9H6N6 1097 aa15.55■□□□□ 0.08
CTNS-205ENST00000467663 COL11A2P13942 1736 aaPredicted RBP15.54■□□□□ 0.08
CTNS-205ENST00000467663 NFKBIEO00221 500 aa15.53■□□□□ 0.08
CTNS-205ENST00000467663 LMNB1P20700 586 aa15.53■□□□□ 0.08
CTNS-205ENST00000467663 PRELPP51888 382 aa15.53■□□□□ 0.08
CTNS-205ENST00000467663 GIGYF2Q6Y7W6 1299 aaKnown RBP15.53■□□□□ 0.08
CTNS-205ENST00000467663 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
CTNS-205ENST00000467663 ZBTB3Q9H5J0 574 aa15.53■□□□□ 0.08
CTNS-205ENST00000467663 ZC3H4Q9UPT8 1303 aaKnown RBP15.52■□□□□ 0.08
CTNS-205ENST00000467663 SENP3-EIF4A1A0A087X0R7 540 aa15.52■□□□□ 0.08
CTNS-205ENST00000467663 FAM177BA6PVY3 158 aa15.52■□□□□ 0.08
CTNS-205ENST00000467663 C21orf2O43822 256 aa15.52■□□□□ 0.08
CTNS-205ENST00000467663 CT47B1P0C2W7 299 aaPredicted RBP15.52■□□□□ 0.08
CTNS-205ENST00000467663 NPR1P16066 1061 aa15.52■□□□□ 0.08
CTNS-205ENST00000467663 KRT24Q2M2I5 525 aa15.52■□□□□ 0.08
CTNS-205ENST00000467663 PROSER3Q2NL68 480 aa15.52■□□□□ 0.08
CTNS-205ENST00000467663 PRPF40BQ6NWY9 871 aaKnown RBP15.52■□□□□ 0.08
CTNS-205ENST00000467663 ZNF34Q8IZ26 560 aa15.52■□□□□ 0.08
CTNS-205ENST00000467663 NYXQ9GZU5 481 aa15.52■□□□□ 0.08
CTNS-205ENST00000467663 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
CTNS-205ENST00000467663 IBTKQ9P2D0 1353 aaPredicted RBP15.51■□□□□ 0.07
CTNS-205ENST00000467663 UBN2Q6ZU65 1347 aa15.51■□□□□ 0.07
CTNS-205ENST00000467663 SBF1O95248 1867 aa15.51■□□□□ 0.07
CTNS-205ENST00000467663 HOXB7P09629 217 aa15.51■□□□□ 0.07
CTNS-205ENST00000467663 ZNF853P0CG23 659 aa15.51■□□□□ 0.07
CTNS-205ENST00000467663 GTF2E1P29083 439 aaPredicted RBP15.51■□□□□ 0.07
CTNS-205ENST00000467663 DUSP27Q5VZP5 1158 aa15.51■□□□□ 0.07
CTNS-205ENST00000467663 C7orf43Q8WVR3 580 aa15.51■□□□□ 0.07
CTNS-205ENST00000467663 NMRK2Q9NPI5 230 aa15.51■□□□□ 0.07
CTNS-205ENST00000467663 KDM2BQ8NHM5 1336 aa15.5■□□□□ 0.07
CTNS-205ENST00000467663 LTBP3Q9NS15 1303 aa15.5■□□□□ 0.07
CTNS-205ENST00000467663 ANXA1P04083 346 aa15.5■□□□□ 0.07
CTNS-205ENST00000467663 GPTP24298 496 aa15.5■□□□□ 0.07
CTNS-205ENST00000467663 GNAI1P63096 354 aa15.5■□□□□ 0.07
CTNS-205ENST00000467663 SOGA3Q5TF21 947 aa15.5■□□□□ 0.07
CTNS-205ENST00000467663 SUSD4Q5VX71 490 aa15.5■□□□□ 0.07
CTNS-205ENST00000467663 DDX21Q9NR30 783 aaKnown RBP eCLIP15.5■□□□□ 0.07
CTNS-205ENST00000467663 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
CTNS-205ENST00000467663 NUP98P52948 1817 aa15.5■□□□□ 0.07
CTNS-205ENST00000467663 CRY2Q49AN0 593 aa15.49■□□□□ 0.07
CTNS-205ENST00000467663 ERFEQ4G0M1 354 aa15.49■□□□□ 0.07
CTNS-205ENST00000467663 PARP10Q53GL7 1025 aa15.49■□□□□ 0.07
CTNS-205ENST00000467663 COPS6Q7L5N1 327 aa15.49■□□□□ 0.07
CTNS-205ENST00000467663 NUTM1Q86Y26 1132 aa15.49■□□□□ 0.07
CTNS-205ENST00000467663 NECTIN2Q92692 538 aa15.49■□□□□ 0.07
CTNS-205ENST00000467663 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms