RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 TTLL6Q8N841 843 aa23.71■■□□□ 1.39
CGREF1-208ENST00000467539 CNBD1Q8NA66 436 aa23.71■■□□□ 1.39
CGREF1-208ENST00000467539 CFAP44Q96MT7 982 aa23.71■■□□□ 1.39
CGREF1-208ENST00000467539 TPTE2Q6XPS3 522 aa23.7■■□□□ 1.38
CGREF1-208ENST00000467539 TTLL7Q6ZT98 887 aa23.7■■□□□ 1.38
CGREF1-208ENST00000467539 CCDC24Q8N4L8 307 aa23.7■■□□□ 1.38
CGREF1-208ENST00000467539 NIP7Q9Y221 180 aaKnown RBP eCLIP23.7■■□□□ 1.38
CGREF1-208ENST00000467539 SCN7AQ01118 1682 aa23.7■■□□□ 1.38
CGREF1-208ENST00000467539 MAP3K15Q6ZN16 1313 aa23.69■■□□□ 1.38
CGREF1-208ENST00000467539 NBPF5PQ86XG9 351 aaPredicted RBP23.69■■□□□ 1.38
CGREF1-208ENST00000467539 NPHP1O15259 732 aa23.68■■□□□ 1.38
CGREF1-208ENST00000467539 ZNF853P0CG23 659 aa23.68■■□□□ 1.38
CGREF1-208ENST00000467539 ST5P78524 1137 aa23.68■■□□□ 1.38
CGREF1-208ENST00000467539 KIF6Q6ZMV9 814 aa23.68■■□□□ 1.38
CGREF1-208ENST00000467539 LRP10Q7Z4F1 713 aa23.68■■□□□ 1.38
CGREF1-208ENST00000467539 BRCA1P38398 1863 aaKnown RBP23.68■■□□□ 1.38
CGREF1-208ENST00000467539 CALD1Q05682 793 aaKnown RBP23.67■■□□□ 1.38
CGREF1-208ENST00000467539 ADCY9O60503 1353 aa23.66■■□□□ 1.38
CGREF1-208ENST00000467539 LAMB4A4D0S4 1761 aa23.66■■□□□ 1.38
CGREF1-208ENST00000467539 KRT24Q2M2I5 525 aa23.65■■□□□ 1.38
CGREF1-208ENST00000467539 ZNF622Q969S3 477 aaKnown RBP eCLIP23.65■■□□□ 1.38
CGREF1-208ENST00000467539 BCORQ6W2J9 1755 aa23.65■■□□□ 1.38
CGREF1-208ENST00000467539 KLRG2A4D1S0 409 aaPredicted RBP23.64■■□□□ 1.37
CGREF1-208ENST00000467539 HOXB7P09629 217 aa23.64■■□□□ 1.37
CGREF1-208ENST00000467539 GIGYF2Q6Y7W6 1299 aaKnown RBP23.64■■□□□ 1.37
CGREF1-208ENST00000467539 MRS2Q9HD23 443 aa23.64■■□□□ 1.37
CGREF1-208ENST00000467539 IFT57Q9NWB7 429 aa23.64■■□□□ 1.37
CGREF1-208ENST00000467539 ATP10DQ9P241 1426 aa23.64■■□□□ 1.37
CGREF1-208ENST00000467539 SRGNP10124 158 aa23.63■■□□□ 1.37
CGREF1-208ENST00000467539 GNAI1P63096 354 aa23.63■■□□□ 1.37
CGREF1-208ENST00000467539 PROSER3Q2NL68 480 aa23.63■■□□□ 1.37
CGREF1-208ENST00000467539 STYK1Q6J9G0 422 aa23.63■■□□□ 1.37
CGREF1-208ENST00000467539 ZBTB3Q9H5J0 574 aa23.63■■□□□ 1.37
CGREF1-208ENST00000467539 DDX21Q9NR30 783 aaKnown RBP eCLIP23.63■■□□□ 1.37
CGREF1-208ENST00000467539 MBIPQ9NS73 344 aa23.63■■□□□ 1.37
CGREF1-208ENST00000467539 ARFGEF1Q9Y6D6 1849 aa23.63■■□□□ 1.37
CGREF1-208ENST00000467539 ZNF34Q8IZ26 560 aa23.62■■□□□ 1.37
CGREF1-208ENST00000467539 NECTIN2Q92692 538 aa23.62■■□□□ 1.37
CGREF1-208ENST00000467539 MASTLQ96GX5 879 aa23.62■■□□□ 1.37
CGREF1-208ENST00000467539 NYXQ9GZU5 481 aa23.62■■□□□ 1.37
CGREF1-208ENST00000467539 FAM177BA6PVY3 158 aa23.61■■□□□ 1.37
CGREF1-208ENST00000467539 ANXA1P04083 346 aa23.61■■□□□ 1.37
CGREF1-208ENST00000467539 GTF2E1P29083 439 aaPredicted RBP23.61■■□□□ 1.37
CGREF1-208ENST00000467539 NCBP3Q53F19 620 aaKnown RBP23.61■■□□□ 1.37
CGREF1-208ENST00000467539 C9orf131Q5VYM1 1079 aa23.61■■□□□ 1.37
CGREF1-208ENST00000467539 COPS6Q7L5N1 327 aa23.61■■□□□ 1.37
CGREF1-208ENST00000467539 CNKSR1Q969H4 720 aa23.61■■□□□ 1.37
CGREF1-208ENST00000467539 GPBP1L1Q9HC44 474 aaPredicted RBP23.61■■□□□ 1.37
CGREF1-208ENST00000467539 CCDC27Q2M243 656 aa23.6■■□□□ 1.37
CGREF1-208ENST00000467539 DUSP27Q5VZP5 1158 aa23.6■■□□□ 1.37
CGREF1-208ENST00000467539 ANKRD31Q8N7Z5 1873 aa23.59■■□□□ 1.37
CGREF1-208ENST00000467539 NPR1P16066 1061 aa23.58■■□□□ 1.37
CGREF1-208ENST00000467539 C1QTNF8P60827 252 aa23.58■■□□□ 1.37
CGREF1-208ENST00000467539 HDGFL1Q5TGJ6 251 aa23.58■■□□□ 1.37
CGREF1-208ENST00000467539 XAGE3Q8WTP9 111 aa23.58■■□□□ 1.37
CGREF1-208ENST00000467539 GPTP24298 496 aa23.57■■□□□ 1.36
CGREF1-208ENST00000467539 AIMP1Q12904 312 aaKnown RBP23.57■■□□□ 1.36
CGREF1-208ENST00000467539 PARP10Q53GL7 1025 aa23.57■■□□□ 1.36
CGREF1-208ENST00000467539 SUSD4Q5VX71 490 aa23.57■■□□□ 1.36
CGREF1-208ENST00000467539 DBF4Q9UBU7 674 aaPredicted RBP23.57■■□□□ 1.36
CGREF1-208ENST00000467539 C21orf2O43822 256 aa23.56■■□□□ 1.36
CGREF1-208ENST00000467539 WWC1Q8IX03 1113 aa23.56■■□□□ 1.36
CGREF1-208ENST00000467539 ZNF526Q8TF50 670 aaPredicted RBP23.56■■□□□ 1.36
CGREF1-208ENST00000467539 CHPF2Q9P2E5 772 aa23.56■■□□□ 1.36
CGREF1-208ENST00000467539 UBN2Q6ZU65 1347 aa23.56■■□□□ 1.36
CGREF1-208ENST00000467539 DLEC1Q9Y238 1755 aa23.55■■□□□ 1.36
CGREF1-208ENST00000467539 NUP98P52948 1817 aa23.55■■□□□ 1.36
CGREF1-208ENST00000467539 ERFEQ4G0M1 354 aa23.55■■□□□ 1.36
CGREF1-208ENST00000467539 PPP1R42Q7Z4L9 355 aa23.55■■□□□ 1.36
CGREF1-208ENST00000467539 NUTM1Q86Y26 1132 aa23.55■■□□□ 1.36
CGREF1-208ENST00000467539 RNF181Q9P0P0 153 aa23.55■■□□□ 1.36
CGREF1-208ENST00000467539 LMNB1P20700 586 aa23.54■■□□□ 1.36
CGREF1-208ENST00000467539 HSP90AB3PQ58FF7 597 aa23.54■■□□□ 1.36
CGREF1-208ENST00000467539 C7orf43Q8WVR3 580 aa23.54■■□□□ 1.36
CGREF1-208ENST00000467539 HYPKQ9NX55 129 aa23.54■■□□□ 1.36
CGREF1-208ENST00000467539 NFKBIEO00221 500 aa23.53■■□□□ 1.36
CGREF1-208ENST00000467539 ALDH1B1P30837 517 aa23.53■■□□□ 1.36
CGREF1-208ENST00000467539 RASSF7Q02833 373 aa23.53■■□□□ 1.36
CGREF1-208ENST00000467539 TCIRG1Q13488 830 aa23.53■■□□□ 1.36
CGREF1-208ENST00000467539 PRPF40BQ6NWY9 871 aaKnown RBP23.53■■□□□ 1.36
CGREF1-208ENST00000467539 CHMP4AQ9BY43 222 aa23.53■■□□□ 1.36
CGREF1-208ENST00000467539 ZNF219Q9P2Y4 722 aaPredicted RBP23.53■■□□□ 1.36
CGREF1-208ENST00000467539 IBTKQ9P2D0 1353 aaPredicted RBP23.52■■□□□ 1.36
CGREF1-208ENST00000467539 ELL2O00472 640 aaPredicted RBP23.52■■□□□ 1.36
CGREF1-208ENST00000467539 NTSR2O95665 410 aa23.52■■□□□ 1.36
CGREF1-208ENST00000467539 PRELPP51888 382 aa23.52■■□□□ 1.36
CGREF1-208ENST00000467539 CRY2Q49AN0 593 aa23.52■■□□□ 1.36
CGREF1-208ENST00000467539 SLC10A5Q5PT55 438 aa23.52■■□□□ 1.36
CGREF1-208ENST00000467539 SOGA3Q5TF21 947 aa23.52■■□□□ 1.36
CGREF1-208ENST00000467539 ANKRD13DQ6ZTN6 518 aa23.52■■□□□ 1.36
CGREF1-208ENST00000467539 C8orf58Q8NAV2 365 aa23.52■■□□□ 1.36
CGREF1-208ENST00000467539 PLBD2Q8NHP8 589 aa23.51■■□□□ 1.35
CGREF1-208ENST00000467539 UTP14AQ9BVJ6 771 aaKnown RBP23.51■■□□□ 1.35
CGREF1-208ENST00000467539 IL16Q14005 1332 aa23.5■■□□□ 1.35
CGREF1-208ENST00000467539 SENP3-EIF4A1A0A087X0R7 540 aa23.49■■□□□ 1.35
CGREF1-208ENST00000467539 HOXA10P31260 410 aaPredicted RBP23.49■■□□□ 1.35
CGREF1-208ENST00000467539 NLRP10Q86W26 655 aa23.49■■□□□ 1.35
CGREF1-208ENST00000467539 KIF3CO14782 793 aa23.48■■□□□ 1.35
CGREF1-208ENST00000467539 LTBP3Q9NS15 1303 aa23.48■■□□□ 1.35
CGREF1-208ENST00000467539 ZC3H4Q9UPT8 1303 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms