RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SCG3Q8WXD2 468 aaKnown RBP7.49□□□□□ -1.21
VPS50-209ENST00000467326 TRERF1Q96PN7 1200 aa7.49□□□□□ -1.21
VPS50-209ENST00000467326 HINFPQ9BQA5 517 aa7.49□□□□□ -1.21
VPS50-209ENST00000467326 C21orf2O43822 256 aa7.48□□□□□ -1.21
VPS50-209ENST00000467326 ATG7O95352 703 aa7.48□□□□□ -1.21
VPS50-209ENST00000467326 THBS1P07996 1170 aa7.48□□□□□ -1.21
VPS50-209ENST00000467326 HIRAP54198 1017 aaPredicted RBP7.48□□□□□ -1.21
VPS50-209ENST00000467326 ELOAQ14241 798 aaKnown RBP7.48□□□□□ -1.21
VPS50-209ENST00000467326 ARSJQ5FYB0 599 aaPredicted RBP7.48□□□□□ -1.21
VPS50-209ENST00000467326 SH3PXD2AQ5TCZ1 1133 aa7.48□□□□□ -1.21
VPS50-209ENST00000467326 STK32AQ8WU08 396 aa7.48□□□□□ -1.21
VPS50-209ENST00000467326 PSMG3-AS1Q96PY0 264 aa7.48□□□□□ -1.21
VPS50-209ENST00000467326 CNTNAP5Q8WYK1 1306 aa7.48□□□□□ -1.21
VPS50-209ENST00000467326 LGR5O75473 907 aa7.47□□□□□ -1.21
VPS50-209ENST00000467326 GAS6Q14393 721 aa7.47□□□□□ -1.21
VPS50-209ENST00000467326 BICDL1Q6ZP65 573 aa7.47□□□□□ -1.21
VPS50-209ENST00000467326 IGFBP4P22692 258 aa7.46□□□□□ -1.22
VPS50-209ENST00000467326 SWI5Q1ZZU3 235 aa7.46□□□□□ -1.22
VPS50-209ENST00000467326 FIGNL1Q6PIW4 674 aa7.46□□□□□ -1.22
VPS50-209ENST00000467326 POTEAQ6S8J7 498 aa7.46□□□□□ -1.22
VPS50-209ENST00000467326 GAS2L2Q8NHY3 880 aa7.46□□□□□ -1.22
VPS50-209ENST00000467326 CHMP7Q8WUX9 453 aaPredicted RBP7.46□□□□□ -1.22
VPS50-209ENST00000467326 ACIN1Q9UKV3 1341 aaKnown RBP7.46□□□□□ -1.22
VPS50-209ENST00000467326 IGF1RP08069 1367 aa7.46□□□□□ -1.22
VPS50-209ENST00000467326 ATAD2Q6PL18 1390 aa7.46□□□□□ -1.22
VPS50-209ENST00000467326 A0A1W2PNR3 127 aa7.45□□□□□ -1.22
VPS50-209ENST00000467326 SUPT5HO00267 1087 aaKnown RBP7.45□□□□□ -1.22
VPS50-209ENST00000467326 UBAP2LQ14157 1087 aaKnown RBP7.45□□□□□ -1.22
VPS50-209ENST00000467326 NLRP8Q86W28 1048 aa7.45□□□□□ -1.22
VPS50-209ENST00000467326 STAG2Q8N3U4 1231 aa7.45□□□□□ -1.22
VPS50-209ENST00000467326 RHPN1Q8TCX5 695 aa7.45□□□□□ -1.22
VPS50-209ENST00000467326 PHF24Q9UPV7 400 aa7.45□□□□□ -1.22
VPS50-209ENST00000467326 GPC6Q9Y625 555 aaPredicted RBP7.45□□□□□ -1.22
VPS50-209ENST00000467326 GJA3Q9Y6H8 435 aa7.45□□□□□ -1.22
VPS50-209ENST00000467326 PROCP04070 461 aa7.44□□□□□ -1.22
VPS50-209ENST00000467326 TMEM164Q5U3C3 297 aa7.44□□□□□ -1.22
VPS50-209ENST00000467326 ZIC5Q96T25 663 aa7.44□□□□□ -1.22
VPS50-209ENST00000467326 C2orf49Q9BVC5 232 aaPredicted RBP7.44□□□□□ -1.22
VPS50-209ENST00000467326 PHACTR1Q9C0D0 580 aa7.44□□□□□ -1.22
VPS50-209ENST00000467326 ATXN7L1Q9ULK2 861 aaPredicted RBP7.44□□□□□ -1.22
VPS50-209ENST00000467326 PIK3R2O00459 728 aa7.43□□□□□ -1.22
VPS50-209ENST00000467326 PPP1R15AO75807 674 aaPredicted RBP7.43□□□□□ -1.22
VPS50-209ENST00000467326 WEE1P30291 646 aa7.43□□□□□ -1.22
VPS50-209ENST00000467326 C1orf53Q5VUE5 145 aa7.43□□□□□ -1.22
VPS50-209ENST00000467326 ABHD17AQ96GS6 310 aa7.43□□□□□ -1.22
VPS50-209ENST00000467326 HCN4Q9Y3Q4 1203 aa7.43□□□□□ -1.22
VPS50-209ENST00000467326 DCDC2BA2VCK2 349 aa7.42□□□□□ -1.22
VPS50-209ENST00000467326 FOXO3O43524 673 aa7.42□□□□□ -1.22
VPS50-209ENST00000467326 ITGB2P05107 769 aa7.42□□□□□ -1.22
VPS50-209ENST00000467326 MX2P20592 715 aa7.42□□□□□ -1.22
VPS50-209ENST00000467326 FAM69CQ0P6D2 419 aa7.42□□□□□ -1.22
VPS50-209ENST00000467326 NGLY1Q96IV0 654 aa7.42□□□□□ -1.22
VPS50-209ENST00000467326 CFHR5Q9BXR6 569 aa7.42□□□□□ -1.22
VPS50-209ENST00000467326 PCDHGC4Q9Y5F7 938 aa7.42□□□□□ -1.22
VPS50-209ENST00000467326 ATXN7O15265 892 aaPredicted RBP7.41□□□□□ -1.22
VPS50-209ENST00000467326 PRMT3O60678 531 aa7.41□□□□□ -1.22
VPS50-209ENST00000467326 FAM157BP0CG42 384 aa7.41□□□□□ -1.22
VPS50-209ENST00000467326 SAMD5Q5TGI4 173 aa7.41□□□□□ -1.22
VPS50-209ENST00000467326 LRRC69Q6ZNQ3 347 aa7.41□□□□□ -1.22
VPS50-209ENST00000467326 ALDH16A1Q8IZ83 802 aa7.41□□□□□ -1.22
VPS50-209ENST00000467326 VTI1AQ96AJ9 217 aa7.41□□□□□ -1.22
VPS50-209ENST00000467326 ARID3AQ99856 593 aa7.41□□□□□ -1.22
VPS50-209ENST00000467326 ZCCHC2Q9C0B9 1178 aaKnown RBP7.41□□□□□ -1.22
VPS50-209ENST00000467326 NDFIP2Q9NV92 336 aa7.41□□□□□ -1.22
VPS50-209ENST00000467326 MKL2Q9ULH7 1088 aa7.41□□□□□ -1.22
VPS50-209ENST00000467326 BNIP3LO60238 219 aa7.4□□□□□ -1.22
VPS50-209ENST00000467326 FGFR3P22607 806 aa7.4□□□□□ -1.22
VPS50-209ENST00000467326 BAG6P46379 1132 aa7.4□□□□□ -1.22
VPS50-209ENST00000467326 MAP2K3P46734 347 aa7.4□□□□□ -1.22
VPS50-209ENST00000467326 OCLNQ16625 522 aa7.4□□□□□ -1.22
VPS50-209ENST00000467326 Q8N3U1 123 aa7.4□□□□□ -1.22
VPS50-209ENST00000467326 KLRG1Q96E93 195 aa7.4□□□□□ -1.22
VPS50-209ENST00000467326 HSH2DQ96JZ2 352 aa7.4□□□□□ -1.22
VPS50-209ENST00000467326 PRIMPOLQ96LW4 560 aa7.4□□□□□ -1.22
VPS50-209ENST00000467326 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
VPS50-209ENST00000467326 KHNYNO15037 678 aaKnown RBP7.39□□□□□ -1.23
VPS50-209ENST00000467326 FKBP5Q13451 457 aaPredicted RBP7.39□□□□□ -1.23
VPS50-209ENST00000467326 RTN1Q16799 776 aa7.39□□□□□ -1.23
VPS50-209ENST00000467326 KRTAP1-3Q8IUG1 177 aa7.39□□□□□ -1.23
VPS50-209ENST00000467326 OIP5O43482 229 aa7.38□□□□□ -1.23
VPS50-209ENST00000467326 MAPTP10636 758 aaKnown RBP7.38□□□□□ -1.23
VPS50-209ENST00000467326 HIF1AQ16665 826 aa7.38□□□□□ -1.23
VPS50-209ENST00000467326 C7orf43Q8WVR3 580 aa7.38□□□□□ -1.23
VPS50-209ENST00000467326 CLP1Q92989 425 aaKnown RBP7.38□□□□□ -1.23
VPS50-209ENST00000467326 ACDQ96AP0 544 aa7.38□□□□□ -1.23
VPS50-209ENST00000467326 CXXC1Q9P0U4 656 aaPredicted RBP7.38□□□□□ -1.23
VPS50-209ENST00000467326 BMP4P12644 408 aa7.37□□□□□ -1.23
VPS50-209ENST00000467326 CD33P20138 364 aa7.37□□□□□ -1.23
VPS50-209ENST00000467326 TNP2Q05952 138 aa7.37□□□□□ -1.23
VPS50-209ENST00000467326 SUSD3Q96L08 255 aa7.37□□□□□ -1.23
VPS50-209ENST00000467326 QTRT2Q9H974 415 aaKnown RBP7.37□□□□□ -1.23
VPS50-209ENST00000467326 ANKIB1Q9P2G1 1089 aa7.37□□□□□ -1.23
VPS50-209ENST00000467326 EFSO43281 561 aa7.36□□□□□ -1.23
VPS50-209ENST00000467326 ZNF280CQ8ND82 737 aa7.36□□□□□ -1.23
VPS50-209ENST00000467326 MKNK1Q9BUB5 465 aa7.36□□□□□ -1.23
VPS50-209ENST00000467326 TYRO3Q06418 890 aa7.35□□□□□ -1.23
VPS50-209ENST00000467326 LAMC2Q13753 1193 aa7.35□□□□□ -1.23
VPS50-209ENST00000467326 OXCT2Q9BYC2 517 aaPredicted RBP7.35□□□□□ -1.23
VPS50-209ENST00000467326 GDF2Q9UK05 429 aaPredicted RBP7.35□□□□□ -1.23
VPS50-209ENST00000467326 TGFBR3LH3BV60 316 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms