RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 APAF1O14727 1248 aa25.43■■□□□ 1.66
GMDS-203ENST00000467288 BRIP1Q9BX63 1249 aa25.42■■□□□ 1.66
GMDS-203ENST00000467288 ANP32CO43423 234 aa25.41■■□□□ 1.66
GMDS-203ENST00000467288 ANKRD31Q8N7Z5 1873 aa25.4■■□□□ 1.66
GMDS-203ENST00000467288 MYL6BP14649 208 aa25.4■■□□□ 1.66
GMDS-203ENST00000467288 HLFQ16534 295 aa25.4■■□□□ 1.66
GMDS-203ENST00000467288 C9orf131Q5VYM1 1079 aa25.4■■□□□ 1.66
GMDS-203ENST00000467288 C2CD5Q86YS7 1000 aa25.4■■□□□ 1.66
GMDS-203ENST00000467288 NGEFQ8N5V2 710 aa25.4■■□□□ 1.66
GMDS-203ENST00000467288 CNBD1Q8NA66 436 aa25.4■■□□□ 1.66
GMDS-203ENST00000467288 PDZRN3Q9UPQ7 1066 aa25.4■■□□□ 1.66
GMDS-203ENST00000467288 DLEC1Q9Y238 1755 aa25.4■■□□□ 1.66
GMDS-203ENST00000467288 ERVV-1B6SEH8 477 aa25.39■■□□□ 1.66
GMDS-203ENST00000467288 H0YIN7 160 aa25.39■■□□□ 1.66
GMDS-203ENST00000467288 TTLL7Q6ZT98 887 aa25.39■■□□□ 1.66
GMDS-203ENST00000467288 LAS1LQ9Y4W2 734 aaKnown RBP25.39■■□□□ 1.66
GMDS-203ENST00000467288 MAP3K15Q6ZN16 1313 aa25.38■■□□□ 1.65
GMDS-203ENST00000467288 EIF2S2P20042 333 aaKnown RBP25.38■■□□□ 1.65
GMDS-203ENST00000467288 PDE6BP35913 854 aa25.38■■□□□ 1.65
GMDS-203ENST00000467288 PDIA6Q15084 440 aa25.38■■□□□ 1.65
GMDS-203ENST00000467288 LRP10Q7Z4F1 713 aa25.38■■□□□ 1.65
GMDS-203ENST00000467288 CCDC24Q8N4L8 307 aa25.38■■□□□ 1.65
GMDS-203ENST00000467288 CFAP44Q96MT7 982 aa25.38■■□□□ 1.65
GMDS-203ENST00000467288 NIP7Q9Y221 180 aaKnown RBP eCLIP25.38■■□□□ 1.65
GMDS-203ENST00000467288 TOMM70O94826 608 aa25.37■■□□□ 1.65
GMDS-203ENST00000467288 NMRK2Q9NPI5 230 aa25.37■■□□□ 1.65
GMDS-203ENST00000467288 ST5P78524 1137 aa25.36■■□□□ 1.65
GMDS-203ENST00000467288 KRT24Q2M2I5 525 aa25.36■■□□□ 1.65
GMDS-203ENST00000467288 KIF6Q6ZMV9 814 aa25.36■■□□□ 1.65
GMDS-203ENST00000467288 NBPF5PQ86XG9 351 aaPredicted RBP25.36■■□□□ 1.65
GMDS-203ENST00000467288 ZNF853P0CG23 659 aa25.35■■□□□ 1.65
GMDS-203ENST00000467288 TTLL6Q8N841 843 aa25.35■■□□□ 1.65
GMDS-203ENST00000467288 MRS2Q9HD23 443 aa25.35■■□□□ 1.65
GMDS-203ENST00000467288 NPHP1O15259 732 aa25.34■■□□□ 1.65
GMDS-203ENST00000467288 CALD1Q05682 793 aaKnown RBP25.33■■□□□ 1.65
GMDS-203ENST00000467288 PROSER3Q2NL68 480 aa25.33■■□□□ 1.65
GMDS-203ENST00000467288 TPTE2Q6XPS3 522 aa25.33■■□□□ 1.65
GMDS-203ENST00000467288 NUP98P52948 1817 aa25.33■■□□□ 1.64
GMDS-203ENST00000467288 COL11A2P13942 1736 aaPredicted RBP25.32■■□□□ 1.64
GMDS-203ENST00000467288 HOXB7P09629 217 aa25.32■■□□□ 1.64
GMDS-203ENST00000467288 ZBTB3Q9H5J0 574 aa25.32■■□□□ 1.64
GMDS-203ENST00000467288 MBIPQ9NS73 344 aa25.32■■□□□ 1.64
GMDS-203ENST00000467288 IFT57Q9NWB7 429 aa25.32■■□□□ 1.64
GMDS-203ENST00000467288 ANXA1P04083 346 aa25.31■■□□□ 1.64
GMDS-203ENST00000467288 RNF181Q9P0P0 153 aa25.31■■□□□ 1.64
GMDS-203ENST00000467288 APLP1P51693 650 aa25.3■■□□□ 1.64
GMDS-203ENST00000467288 GNAI1P63096 354 aa25.3■■□□□ 1.64
GMDS-203ENST00000467288 IFFO2Q5TF58 517 aa25.3■■□□□ 1.64
GMDS-203ENST00000467288 GIGYF2Q6Y7W6 1299 aaKnown RBP25.3■■□□□ 1.64
GMDS-203ENST00000467288 NECTIN2Q92692 538 aa25.3■■□□□ 1.64
GMDS-203ENST00000467288 ZNF622Q969S3 477 aaKnown RBP eCLIP25.3■■□□□ 1.64
GMDS-203ENST00000467288 DDX21Q9NR30 783 aaKnown RBP eCLIP25.3■■□□□ 1.64
GMDS-203ENST00000467288 KLRG2A4D1S0 409 aaPredicted RBP25.29■■□□□ 1.64
GMDS-203ENST00000467288 SRGNP10124 158 aa25.29■■□□□ 1.64
GMDS-203ENST00000467288 STYK1Q6J9G0 422 aa25.29■■□□□ 1.64
GMDS-203ENST00000467288 FAM177BA6PVY3 158 aa25.28■■□□□ 1.64
GMDS-203ENST00000467288 ZNF34Q8IZ26 560 aa25.28■■□□□ 1.64
GMDS-203ENST00000467288 CCDC27Q2M243 656 aa25.27■■□□□ 1.64
GMDS-203ENST00000467288 HDGFL1Q5TGJ6 251 aa25.27■■□□□ 1.64
GMDS-203ENST00000467288 DUSP27Q5VZP5 1158 aa25.27■■□□□ 1.64
GMDS-203ENST00000467288 COPS6Q7L5N1 327 aa25.27■■□□□ 1.64
GMDS-203ENST00000467288 MASTLQ96GX5 879 aa25.27■■□□□ 1.64
GMDS-203ENST00000467288 NYXQ9GZU5 481 aa25.27■■□□□ 1.64
GMDS-203ENST00000467288 UBN2Q6ZU65 1347 aa25.27■■□□□ 1.64
GMDS-203ENST00000467288 IBTKQ9P2D0 1353 aaPredicted RBP25.27■■□□□ 1.64
GMDS-203ENST00000467288 NCBP3Q53F19 620 aaKnown RBP25.26■■□□□ 1.63
GMDS-203ENST00000467288 XAGE3Q8WTP9 111 aa25.26■■□□□ 1.63
GMDS-203ENST00000467288 CNKSR1Q969H4 720 aa25.26■■□□□ 1.63
GMDS-203ENST00000467288 CHPF2Q9P2E5 772 aa25.26■■□□□ 1.63
GMDS-203ENST00000467288 GPTP24298 496 aa25.25■■□□□ 1.63
GMDS-203ENST00000467288 C16orf71Q8IYS4 520 aaPredicted RBP25.25■■□□□ 1.63
GMDS-203ENST00000467288 RBM46Q8TBY0 533 aaKnown RBP25.25■■□□□ 1.63
GMDS-203ENST00000467288 KDM2BQ8NHM5 1336 aa25.25■■□□□ 1.63
GMDS-203ENST00000467288 GTF2E1P29083 439 aaPredicted RBP25.24■■□□□ 1.63
GMDS-203ENST00000467288 SUSD4Q5VX71 490 aa25.24■■□□□ 1.63
GMDS-203ENST00000467288 DNAJC5GQ8N7S2 189 aa25.24■■□□□ 1.63
GMDS-203ENST00000467288 RRAGCQ9HB90 399 aa25.24■■□□□ 1.63
GMDS-203ENST00000467288 NPR1P16066 1061 aa25.23■■□□□ 1.63
GMDS-203ENST00000467288 RASSF7Q02833 373 aa25.23■■□□□ 1.63
GMDS-203ENST00000467288 DBF4Q9UBU7 674 aaPredicted RBP25.23■■□□□ 1.63
GMDS-203ENST00000467288 ABCC12Q96J65 1359 aa25.22■■□□□ 1.63
GMDS-203ENST00000467288 SBF1O95248 1867 aa25.22■■□□□ 1.63
GMDS-203ENST00000467288 C21orf2O43822 256 aa25.22■■□□□ 1.63
GMDS-203ENST00000467288 AIMP1Q12904 312 aaKnown RBP25.22■■□□□ 1.63
GMDS-203ENST00000467288 PARP10Q53GL7 1025 aa25.22■■□□□ 1.63
GMDS-203ENST00000467288 NUTM1Q86Y26 1132 aa25.22■■□□□ 1.63
GMDS-203ENST00000467288 WWC1Q8IX03 1113 aa25.22■■□□□ 1.63
GMDS-203ENST00000467288 RIC1Q4ADV7 1423 aa25.21■■□□□ 1.63
GMDS-203ENST00000467288 ARFGEF2Q9Y6D5 1785 aa25.21■■□□□ 1.63
GMDS-203ENST00000467288 NFKBIEO00221 500 aa25.21■■□□□ 1.63
GMDS-203ENST00000467288 NTSR2O95665 410 aa25.21■■□□□ 1.63
GMDS-203ENST00000467288 ERFEQ4G0M1 354 aa25.21■■□□□ 1.63
GMDS-203ENST00000467288 PRPF40BQ6NWY9 871 aaKnown RBP25.21■■□□□ 1.63
GMDS-203ENST00000467288 SLX4Q8IY92 1834 aa25.21■■□□□ 1.63
GMDS-203ENST00000467288 PRELPP51888 382 aa25.2■■□□□ 1.62
GMDS-203ENST00000467288 HSP90AB3PQ58FF7 597 aa25.2■■□□□ 1.62
GMDS-203ENST00000467288 PPP1R42Q7Z4L9 355 aa25.2■■□□□ 1.62
GMDS-203ENST00000467288 TNRC6CQ9HCJ0 1690 aaKnown RBP25.2■■□□□ 1.62
GMDS-203ENST00000467288 LMNB1P20700 586 aa25.19■■□□□ 1.62
GMDS-203ENST00000467288 CRY2Q49AN0 593 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms