RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 IGSF3O75054 1194 aa6.73□□□□□ -1.33
VPS13A-209ENST00000467124 TATP17735 454 aaPredicted RBP6.73□□□□□ -1.33
VPS13A-209ENST00000467124 BRD2P25440 801 aaKnown RBP6.73□□□□□ -1.33
VPS13A-209ENST00000467124 ZNF326Q5BKZ1 582 aaKnown RBP6.73□□□□□ -1.33
VPS13A-209ENST00000467124 ALDH16A1Q8IZ83 802 aa6.73□□□□□ -1.33
VPS13A-209ENST00000467124 CITED4Q96RK1 184 aa6.73□□□□□ -1.33
VPS13A-209ENST00000467124 RNF19AQ9NV58 838 aa6.73□□□□□ -1.33
VPS13A-209ENST00000467124 A0A1B0GTH6 734 aa6.72□□□□□ -1.33
VPS13A-209ENST00000467124 CTSOP43234 321 aaPredicted RBP6.72□□□□□ -1.33
VPS13A-209ENST00000467124 MAPK8P45983 427 aa6.72□□□□□ -1.33
VPS13A-209ENST00000467124 PHKA2P46019 1235 aa6.72□□□□□ -1.33
VPS13A-209ENST00000467124 PLA2G4AP47712 749 aa6.72□□□□□ -1.33
VPS13A-209ENST00000467124 C4orf17Q53FE4 359 aa6.72□□□□□ -1.33
VPS13A-209ENST00000467124 EAPPQ56P03 285 aaPredicted RBP6.72□□□□□ -1.33
VPS13A-209ENST00000467124 IER5Q5VY09 327 aa6.72□□□□□ -1.33
VPS13A-209ENST00000467124 LYSMD3Q7Z3D4 306 aa6.72□□□□□ -1.33
VPS13A-209ENST00000467124 RGL4Q8IZJ4 473 aa6.72□□□□□ -1.33
VPS13A-209ENST00000467124 SETDB2Q96T68 719 aa6.72□□□□□ -1.33
VPS13A-209ENST00000467124 PHACTR1Q9C0D0 580 aa6.72□□□□□ -1.33
VPS13A-209ENST00000467124 TTLL8A6PVC2 850 aa6.71□□□□□ -1.34
VPS13A-209ENST00000467124 TXLNAP40222 546 aa6.71□□□□□ -1.34
VPS13A-209ENST00000467124 DNM1Q05193 864 aaKnown RBP6.71□□□□□ -1.34
VPS13A-209ENST00000467124 COL19A1Q14993 1142 aa6.71□□□□□ -1.34
VPS13A-209ENST00000467124 C11orf91Q3C1V1 193 aa6.71□□□□□ -1.34
VPS13A-209ENST00000467124 NBPF10Q6P3W6 841 aaKnown RBP6.71□□□□□ -1.34
VPS13A-209ENST00000467124 ETFBKMTQ8IXQ9 262 aa6.71□□□□□ -1.34
VPS13A-209ENST00000467124 KLRG1Q96E93 195 aa6.71□□□□□ -1.34
VPS13A-209ENST00000467124 FAM161BQ96MY7 647 aa6.71□□□□□ -1.34
VPS13A-209ENST00000467124 RBCK1Q9BYM8 510 aa6.71□□□□□ -1.34
VPS13A-209ENST00000467124 POLIQ9UNA4 740 aa6.71□□□□□ -1.34
VPS13A-209ENST00000467124 SOS2Q07890 1332 aaPredicted RBP6.71□□□□□ -1.34
VPS13A-209ENST00000467124 AXIN1O15169 862 aa6.7□□□□□ -1.34
VPS13A-209ENST00000467124 C6orf118Q5T5N4 469 aa6.7□□□□□ -1.34
VPS13A-209ENST00000467124 EDEM1Q92611 657 aa6.7□□□□□ -1.34
VPS13A-209ENST00000467124 AIDAQ96BJ3 306 aa6.7□□□□□ -1.34
VPS13A-209ENST00000467124 FAM13BQ9NYF5 915 aa6.7□□□□□ -1.34
VPS13A-209ENST00000467124 WWC3Q9ULE0 1092 aa6.7□□□□□ -1.34
VPS13A-209ENST00000467124 A6NHS1 94 aa6.69□□□□□ -1.34
VPS13A-209ENST00000467124 TGFBR3LH3BV60 316 aa6.69□□□□□ -1.34
VPS13A-209ENST00000467124 GPR182O15218 404 aa6.69□□□□□ -1.34
VPS13A-209ENST00000467124 GFRA3O60609 400 aa6.69□□□□□ -1.34
VPS13A-209ENST00000467124 USP5P45974 858 aa6.69□□□□□ -1.34
VPS13A-209ENST00000467124 TSNAXIP1Q2TAA8 658 aa6.69□□□□□ -1.34
VPS13A-209ENST00000467124 RHPN1Q8TCX5 695 aa6.69□□□□□ -1.34
VPS13A-209ENST00000467124 IFT43Q96FT9 208 aa6.69□□□□□ -1.34
VPS13A-209ENST00000467124 NIF3L1Q9GZT8 377 aa6.69□□□□□ -1.34
VPS13A-209ENST00000467124 ANKIB1Q9P2G1 1089 aa6.69□□□□□ -1.34
VPS13A-209ENST00000467124 RPLP1P05386 114 aaKnown RBP6.68□□□□□ -1.34
VPS13A-209ENST00000467124 BMP1P13497 986 aa6.68□□□□□ -1.34
VPS13A-209ENST00000467124 ATP4AP20648 1035 aa6.68□□□□□ -1.34
VPS13A-209ENST00000467124 ZAP70P43403 619 aa6.68□□□□□ -1.34
VPS13A-209ENST00000467124 PDE3BQ13370 1112 aa6.68□□□□□ -1.34
VPS13A-209ENST00000467124 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.68□□□□□ -1.34
VPS13A-209ENST00000467124 TRIM46Q7Z4K8 759 aa6.68□□□□□ -1.34
VPS13A-209ENST00000467124 GPR152Q8TDT2 470 aa6.68□□□□□ -1.34
VPS13A-209ENST00000467124 DMRTB1Q96MA1 342 aa6.68□□□□□ -1.34
VPS13A-209ENST00000467124 USP20Q9Y2K6 914 aa6.68□□□□□ -1.34
VPS13A-209ENST00000467124 TREHO43280 583 aa6.67□□□□□ -1.34
VPS13A-209ENST00000467124 PLCB3Q01970 1234 aa6.67□□□□□ -1.34
VPS13A-209ENST00000467124 EHHADHQ08426 723 aa6.67□□□□□ -1.34
VPS13A-209ENST00000467124 LBRQ14739 615 aaKnown RBP6.67□□□□□ -1.34
VPS13A-209ENST00000467124 TREML1Q86YW5 311 aa6.67□□□□□ -1.34
VPS13A-209ENST00000467124 HSH2DQ96JZ2 352 aa6.67□□□□□ -1.34
VPS13A-209ENST00000467124 CRISPLD1Q9H336 500 aa6.67□□□□□ -1.34
VPS13A-209ENST00000467124 TIMMDC1Q9NPL8 285 aa6.67□□□□□ -1.34
VPS13A-209ENST00000467124 USP35Q9P2H5 1018 aa6.67□□□□□ -1.34
VPS13A-209ENST00000467124 DYRK1BQ9Y463 629 aa6.67□□□□□ -1.34
VPS13A-209ENST00000467124 RECKO95980 971 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 PDGFAP04085 211 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 LDHBP07195 334 aaKnown RBP6.66□□□□□ -1.34
VPS13A-209ENST00000467124 PCSK2P16519 638 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 MZF1P28698 734 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-209ENST00000467124 FGD1P98174 961 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 POU4F2Q12837 409 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 PRICKLE2Q7Z3G6 844 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 ZNF280CQ8ND82 737 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 KIFC2Q96AC6 838 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 ZFP42Q96MM3 310 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 BCL11AQ9H165 835 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 IGSF5Q9NSI5 407 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 BCS1LQ9Y276 419 aa6.66□□□□□ -1.34
VPS13A-209ENST00000467124 TCF3P15923 654 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 RHOQP17081 205 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 FMR1Q06787 632 aaKnown RBP eCLIP6.65□□□□□ -1.34
VPS13A-209ENST00000467124 DSC3Q14574 896 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 C8orf34Q49A92 452 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 C9orf131Q5VYM1 1079 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 BICDL1Q6ZP65 573 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 C7orf43Q8WVR3 580 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 ALKBH8Q96BT7 664 aaKnown RBP6.65□□□□□ -1.34
VPS13A-209ENST00000467124 FAM129BQ96TA1 746 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 DUSP9Q99956 384 aaKnown RBP6.65□□□□□ -1.34
VPS13A-209ENST00000467124 SENP2Q9HC62 589 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 ATP13A2Q9NQ11 1180 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 C11orf16Q9NQ32 467 aa6.65□□□□□ -1.34
VPS13A-209ENST00000467124 IGHA2P01877 340 aa6.64□□□□□ -1.35
VPS13A-209ENST00000467124 EPB42P16452 691 aa6.64□□□□□ -1.35
VPS13A-209ENST00000467124 SAMD5Q5TGI4 173 aa6.64□□□□□ -1.35
VPS13A-209ENST00000467124 NLRP8Q86W28 1048 aa6.64□□□□□ -1.35
VPS13A-209ENST00000467124 GJD3Q8N144 294 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms