RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 PRPF38BQ5VTL8 546 aaKnown RBP7.78□□□□□ -1.16
CXXC4-202ENST00000466963 PGAP2Q9UHJ9 254 aa7.78□□□□□ -1.16
CXXC4-202ENST00000466963 DDX60Q8IY21 1712 aaKnown RBP7.77□□□□□ -1.16
CXXC4-202ENST00000466963 HTATSF1O43719 755 aaKnown RBP7.77□□□□□ -1.17
CXXC4-202ENST00000466963 ITGBL1O95965 494 aaPredicted RBP7.77□□□□□ -1.17
CXXC4-202ENST00000466963 FKBP8Q14318 412 aa7.77□□□□□ -1.17
CXXC4-202ENST00000466963 GGNBP2Q9H3C7 697 aa7.77□□□□□ -1.17
CXXC4-202ENST00000466963 TLL2Q9Y6L7 1015 aa7.77□□□□□ -1.17
CXXC4-202ENST00000466963 FZD9O00144 591 aa7.77□□□□□ -1.17
CXXC4-202ENST00000466963 KCNQ4P56696 695 aa7.77□□□□□ -1.17
CXXC4-202ENST00000466963 GAS2L2Q8NHY3 880 aa7.76□□□□□ -1.17
CXXC4-202ENST00000466963 RNF216Q9NWF9 866 aaPredicted RBP7.76□□□□□ -1.17
CXXC4-202ENST00000466963 ERBB4Q15303 1308 aa7.76□□□□□ -1.17
CXXC4-202ENST00000466963 EIF6P56537 245 aaKnown RBP7.76□□□□□ -1.17
CXXC4-202ENST00000466963 SLC4A9Q96Q91 983 aa7.76□□□□□ -1.17
CXXC4-202ENST00000466963 COL11A2P13942 1736 aaPredicted RBP7.76□□□□□ -1.17
CXXC4-202ENST00000466963 HOXD11P31277 338 aaPredicted RBP7.76□□□□□ -1.17
CXXC4-202ENST00000466963 VEGFBP49765 207 aa7.76□□□□□ -1.17
CXXC4-202ENST00000466963 TMX4Q9H1E5 349 aaPredicted RBP7.76□□□□□ -1.17
CXXC4-202ENST00000466963 DUOX1Q9NRD9 1551 aa7.76□□□□□ -1.17
CXXC4-202ENST00000466963 EPHX2P34913 555 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 NOGQ13253 232 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 AMIGO3Q86WK7 504 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 SETDB2Q96T68 719 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 LAMB4A4D0S4 1761 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 HEG1Q9ULI3 1381 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 SRGNP10124 158 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 FKBP1BP68106 108 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 TTC5Q8N0Z6 440 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 USHBP1Q8N6Y0 703 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 CNBD1Q8NA66 436 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 CCDC102AQ96A19 550 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 LTBP1Q14766 1721 aa7.75□□□□□ -1.17
CXXC4-202ENST00000466963 UNCXA6NJT0 531 aa7.74□□□□□ -1.17
CXXC4-202ENST00000466963 USPL1Q5W0Q7 1092 aa7.74□□□□□ -1.17
CXXC4-202ENST00000466963 C7orf43Q8WVR3 580 aa7.74□□□□□ -1.17
CXXC4-202ENST00000466963 JDP2Q8WYK2 163 aa7.74□□□□□ -1.17
CXXC4-202ENST00000466963 RNMTO43148 476 aaKnown RBP7.74□□□□□ -1.17
CXXC4-202ENST00000466963 TPTE2Q6XPS3 522 aa7.74□□□□□ -1.17
CXXC4-202ENST00000466963 ERVV-1B6SEH8 477 aa7.74□□□□□ -1.17
CXXC4-202ENST00000466963 PNISRQ8TF01 805 aaKnown RBP7.74□□□□□ -1.17
CXXC4-202ENST00000466963 FMNL2Q96PY5 1086 aa7.74□□□□□ -1.17
CXXC4-202ENST00000466963 CRAMP1Q96RY5 1269 aa7.74□□□□□ -1.17
CXXC4-202ENST00000466963 EMILIN1Q9Y6C2 1016 aa7.74□□□□□ -1.17
CXXC4-202ENST00000466963 CEMIPQ8WUJ3 1361 aa7.73□□□□□ -1.17
CXXC4-202ENST00000466963 HOXA10P31260 410 aaPredicted RBP7.73□□□□□ -1.17
CXXC4-202ENST00000466963 IARSP41252 1262 aaKnown RBP7.73□□□□□ -1.17
CXXC4-202ENST00000466963 CNTROBQ8N137 903 aa7.73□□□□□ -1.17
CXXC4-202ENST00000466963 NBPF15Q8N660 670 aa7.73□□□□□ -1.17
CXXC4-202ENST00000466963 DDX21Q9NR30 783 aaKnown RBP eCLIP7.73□□□□□ -1.17
CXXC4-202ENST00000466963 RASSF7Q02833 373 aa7.73□□□□□ -1.17
CXXC4-202ENST00000466963 CFHR5Q9BXR6 569 aa7.73□□□□□ -1.17
CXXC4-202ENST00000466963 ADARB2Q9NS39 739 aaKnown RBP7.73□□□□□ -1.17
CXXC4-202ENST00000466963 CAPN15O75808 1086 aa7.72□□□□□ -1.17
CXXC4-202ENST00000466963 CHRNA5P30532 468 aa7.72□□□□□ -1.17
CXXC4-202ENST00000466963 HSP90B1P14625 803 aaKnown RBP7.72□□□□□ -1.17
CXXC4-202ENST00000466963 RPS12P25398 132 aaKnown RBP7.72□□□□□ -1.17
CXXC4-202ENST00000466963 LBX1P52954 281 aa7.72□□□□□ -1.17
CXXC4-202ENST00000466963 TNIP1Q15025 636 aa7.72□□□□□ -1.17
CXXC4-202ENST00000466963 PRR5LQ6MZQ0 368 aa7.72□□□□□ -1.17
CXXC4-202ENST00000466963 CAPNS2Q96L46 248 aa7.72□□□□□ -1.17
CXXC4-202ENST00000466963 SNED1Q8TER0 1413 aa7.72□□□□□ -1.17
CXXC4-202ENST00000466963 RBBP6Q7Z6E9 1792 aaKnown RBP7.72□□□□□ -1.17
CXXC4-202ENST00000466963 PRPF40BQ6NWY9 871 aaKnown RBP7.72□□□□□ -1.17
CXXC4-202ENST00000466963 BCL2L12Q9HB09 334 aa7.72□□□□□ -1.17
CXXC4-202ENST00000466963 BABAM1Q9NWV8 329 aa7.72□□□□□ -1.17
CXXC4-202ENST00000466963 IL13P35225 146 aa7.71□□□□□ -1.18
CXXC4-202ENST00000466963 CRY2Q49AN0 593 aa7.71□□□□□ -1.18
CXXC4-202ENST00000466963 INTS3Q68E01 1043 aaKnown RBP7.71□□□□□ -1.18
CXXC4-202ENST00000466963 NFATC2IPQ8NCF5 419 aa7.71□□□□□ -1.18
CXXC4-202ENST00000466963 CARD14Q9BXL6 1004 aa7.71□□□□□ -1.18
CXXC4-202ENST00000466963 RTFDC1Q9BY42 306 aaPredicted RBP7.71□□□□□ -1.18
CXXC4-202ENST00000466963 DNAJC10Q8IXB1 793 aa7.7□□□□□ -1.18
CXXC4-202ENST00000466963 SRP68Q9UHB9 627 aaKnown RBP7.7□□□□□ -1.18
CXXC4-202ENST00000466963 MKRN1Q9UHC7 482 aaKnown RBP7.7□□□□□ -1.18
CXXC4-202ENST00000466963 LAMB1P07942 1786 aa7.7□□□□□ -1.18
CXXC4-202ENST00000466963 PARP10Q53GL7 1025 aa7.7□□□□□ -1.18
CXXC4-202ENST00000466963 ZNF622Q969S3 477 aaKnown RBP eCLIP7.7□□□□□ -1.18
CXXC4-202ENST00000466963 FAM161AQ3B820 660 aa7.69□□□□□ -1.18
CXXC4-202ENST00000466963 DPF2Q92785 391 aa7.69□□□□□ -1.18
CXXC4-202ENST00000466963 RBM17Q96I25 401 aaKnown RBP7.69□□□□□ -1.18
CXXC4-202ENST00000466963 GPR101Q96P66 508 aaPredicted RBP7.69□□□□□ -1.18
CXXC4-202ENST00000466963 CHMP4AQ9BY43 222 aa7.69□□□□□ -1.18
CXXC4-202ENST00000466963 ANKRD36CQ5JPF3 1778 aa7.69□□□□□ -1.18
CXXC4-202ENST00000466963 COL1A1P02452 1464 aaPredicted RBP7.69□□□□□ -1.18
CXXC4-202ENST00000466963 CAMTA2O94983 1202 aa7.69□□□□□ -1.18
CXXC4-202ENST00000466963 SLX4Q8IY92 1834 aa7.69□□□□□ -1.18
CXXC4-202ENST00000466963 CDC37L1Q7L3B6 337 aa7.69□□□□□ -1.18
CXXC4-202ENST00000466963 ZNF496Q96IT1 587 aaPredicted RBP7.69□□□□□ -1.18
CXXC4-202ENST00000466963 PNNQ9H307 717 aaKnown RBP7.69□□□□□ -1.18
CXXC4-202ENST00000466963 ABT1Q9ULW3 272 aaKnown RBP7.69□□□□□ -1.18
CXXC4-202ENST00000466963 EIF4G2P78344 907 aaKnown RBP eCLIP7.68□□□□□ -1.18
CXXC4-202ENST00000466963 TEFQ10587 303 aa7.68□□□□□ -1.18
CXXC4-202ENST00000466963 CTU1Q7Z7A3 348 aaKnown RBP7.68□□□□□ -1.18
CXXC4-202ENST00000466963 SIN3AQ96ST3 1273 aa7.68□□□□□ -1.18
CXXC4-202ENST00000466963 PITPNM2Q9BZ72 1349 aa7.68□□□□□ -1.18
CXXC4-202ENST00000466963 GNAT3A8MTJ3 354 aa7.68□□□□□ -1.18
CXXC4-202ENST00000466963 C21orf2O43822 256 aa7.68□□□□□ -1.18
CXXC4-202ENST00000466963 NEUROD1Q13562 356 aa7.68□□□□□ -1.18
CXXC4-202ENST00000466963 ARHGEF6Q15052 776 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms