RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 COX20Q5RI15 118 aa7.83□□□□□ -1.16
EDEM3-205ENST00000466606 NANOS1Q8WY41 292 aaKnown RBP7.83□□□□□ -1.16
EDEM3-205ENST00000466606 SUSD3Q96L08 255 aa7.83□□□□□ -1.16
EDEM3-205ENST00000466606 ZCCHC2Q9C0B9 1178 aaKnown RBP7.83□□□□□ -1.16
EDEM3-205ENST00000466606 TREML4Q6UXN2 200 aa7.82□□□□□ -1.16
EDEM3-205ENST00000466606 IRF7Q92985 503 aa7.82□□□□□ -1.16
EDEM3-205ENST00000466606 DCDC2BA2VCK2 349 aa7.81□□□□□ -1.16
EDEM3-205ENST00000466606 ATXN7O15265 892 aaPredicted RBP7.81□□□□□ -1.16
EDEM3-205ENST00000466606 PTCD1O75127 700 aaKnown RBP7.81□□□□□ -1.16
EDEM3-205ENST00000466606 PDE4CQ08493 712 aa7.81□□□□□ -1.16
EDEM3-205ENST00000466606 NLRP8Q86W28 1048 aa7.81□□□□□ -1.16
EDEM3-205ENST00000466606 ABHD17AQ96GS6 310 aa7.81□□□□□ -1.16
EDEM3-205ENST00000466606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.81□□□□□ -1.16
EDEM3-205ENST00000466606 BCS1LQ9Y276 419 aa7.81□□□□□ -1.16
EDEM3-205ENST00000466606 BNIP3LO60238 219 aa7.8□□□□□ -1.16
EDEM3-205ENST00000466606 GMPRP36959 345 aa7.8□□□□□ -1.16
EDEM3-205ENST00000466606 RNFT1Q5M7Z0 435 aa7.8□□□□□ -1.16
EDEM3-205ENST00000466606 C16orf46Q6P387 395 aa7.8□□□□□ -1.16
EDEM3-205ENST00000466606 COL26A1Q96A83 441 aa7.8□□□□□ -1.16
EDEM3-205ENST00000466606 GMCL1Q96IK5 515 aa7.8□□□□□ -1.16
EDEM3-205ENST00000466606 COL25A1Q9BXS0 654 aaPredicted RBP7.8□□□□□ -1.16
EDEM3-205ENST00000466606 ANO2Q9NQ90 1003 aa7.8□□□□□ -1.16
EDEM3-205ENST00000466606 KHNYNO15037 678 aaKnown RBP7.79□□□□□ -1.16
EDEM3-205ENST00000466606 VSIG8P0DPA2 414 aa7.79□□□□□ -1.16
EDEM3-205ENST00000466606 MTMR3Q13615 1198 aa7.79□□□□□ -1.16
EDEM3-205ENST00000466606 LBRQ14739 615 aaKnown RBP7.79□□□□□ -1.16
EDEM3-205ENST00000466606 C11orf91Q3C1V1 193 aa7.79□□□□□ -1.16
EDEM3-205ENST00000466606 FAM26DQ5JW98 314 aa7.79□□□□□ -1.16
EDEM3-205ENST00000466606 FOXR1Q6PIV2 292 aa7.79□□□□□ -1.16
EDEM3-205ENST00000466606 GTF3C2Q8WUA4 911 aaPredicted RBP7.79□□□□□ -1.16
EDEM3-205ENST00000466606 MYO19Q96H55 970 aa7.79□□□□□ -1.16
EDEM3-205ENST00000466606 TRERF1Q96PN7 1200 aa7.79□□□□□ -1.16
EDEM3-205ENST00000466606 HCN2Q9UL51 889 aa7.79□□□□□ -1.16
EDEM3-205ENST00000466606 PCDHGC4Q9Y5F7 938 aa7.79□□□□□ -1.16
EDEM3-205ENST00000466606 TNFRSF10BO14763 440 aa7.78□□□□□ -1.16
EDEM3-205ENST00000466606 ABL1P00519 1130 aa7.78□□□□□ -1.16
EDEM3-205ENST00000466606 KRT76Q01546 638 aa7.78□□□□□ -1.16
EDEM3-205ENST00000466606 GAS6Q14393 721 aa7.78□□□□□ -1.16
EDEM3-205ENST00000466606 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
EDEM3-205ENST00000466606 FIGNL1Q6PIW4 674 aa7.78□□□□□ -1.16
EDEM3-205ENST00000466606 CEP63Q96MT8 703 aa7.78□□□□□ -1.16
EDEM3-205ENST00000466606 ANKIB1Q9P2G1 1089 aa7.78□□□□□ -1.16
EDEM3-205ENST00000466606 GPC6Q9Y625 555 aaPredicted RBP7.78□□□□□ -1.16
EDEM3-205ENST00000466606 MAPTP10636 758 aaKnown RBP7.77□□□□□ -1.17
EDEM3-205ENST00000466606 PDIA4P13667 645 aaKnown RBP7.77□□□□□ -1.17
EDEM3-205ENST00000466606 SERPINB4P48594 390 aa7.77□□□□□ -1.17
EDEM3-205ENST00000466606 ZNF211Q13398 564 aaPredicted RBP7.77□□□□□ -1.17
EDEM3-205ENST00000466606 GRIN2CQ14957 1233 aa7.77□□□□□ -1.17
EDEM3-205ENST00000466606 B4GALNT3Q6L9W6 998 aa7.77□□□□□ -1.17
EDEM3-205ENST00000466606 IFT43Q96FT9 208 aa7.77□□□□□ -1.17
EDEM3-205ENST00000466606 CNTNAP3BQ96NU0 1288 aa7.77□□□□□ -1.17
EDEM3-205ENST00000466606 TRAIPQ9BWF2 469 aa7.77□□□□□ -1.17
EDEM3-205ENST00000466606 CNTNAP3Q9BZ76 1288 aa7.77□□□□□ -1.17
EDEM3-205ENST00000466606 STRN4Q9NRL3 753 aa7.77□□□□□ -1.17
EDEM3-205ENST00000466606 NDFIP2Q9NV92 336 aa7.77□□□□□ -1.17
EDEM3-205ENST00000466606 DNMT3AQ9Y6K1 912 aaPredicted RBP7.77□□□□□ -1.17
EDEM3-205ENST00000466606 CD33P20138 364 aa7.76□□□□□ -1.17
EDEM3-205ENST00000466606 TNP2Q05952 138 aa7.76□□□□□ -1.17
EDEM3-205ENST00000466606 SFSWAPQ12872 951 aaKnown RBP7.76□□□□□ -1.17
EDEM3-205ENST00000466606 BTLAQ7Z6A9 289 aa7.76□□□□□ -1.17
EDEM3-205ENST00000466606 ETFBKMTQ8IXQ9 262 aa7.76□□□□□ -1.17
EDEM3-205ENST00000466606 USP20Q9Y2K6 914 aa7.76□□□□□ -1.17
EDEM3-205ENST00000466606 TGFBR3LH3BV60 316 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 ZBTB39O15060 712 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 MICAL2O94851 1124 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 BRD1O95696 1058 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 FGFR3P22607 806 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 ARID4AP29374 1257 aaPredicted RBP7.75□□□□□ -1.17
EDEM3-205ENST00000466606 IDH3AP50213 366 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 CTBSQ01459 385 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 TYRO3Q06418 890 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 SAMD5Q5TGI4 173 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 TREML1Q86YW5 311 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 CFHR5Q9BXR6 569 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 BRD7Q9NPI1 651 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 DMGDHQ9UI17 866 aaKnown RBP7.75□□□□□ -1.17
EDEM3-205ENST00000466606 ATXN7L1Q9ULK2 861 aaPredicted RBP7.75□□□□□ -1.17
EDEM3-205ENST00000466606 PHF24Q9UPV7 400 aa7.75□□□□□ -1.17
EDEM3-205ENST00000466606 FAM157BP0CG42 384 aa7.74□□□□□ -1.17
EDEM3-205ENST00000466606 MX2P20592 715 aa7.74□□□□□ -1.17
EDEM3-205ENST00000466606 BRD2P25440 801 aaKnown RBP7.74□□□□□ -1.17
EDEM3-205ENST00000466606 HIF1AQ16665 826 aa7.74□□□□□ -1.17
EDEM3-205ENST00000466606 AEBP1Q8IUX7 1158 aa7.74□□□□□ -1.17
EDEM3-205ENST00000466606 HELQQ8TDG4 1101 aa7.74□□□□□ -1.17
EDEM3-205ENST00000466606 STIM2Q9P246 746 aa7.74□□□□□ -1.17
EDEM3-205ENST00000466606 EFSO43281 561 aa7.73□□□□□ -1.17
EDEM3-205ENST00000466606 MPSTP25325 297 aa7.73□□□□□ -1.17
EDEM3-205ENST00000466606 TXNDC2Q86VQ3 553 aa7.73□□□□□ -1.17
EDEM3-205ENST00000466606 ATCAYQ86WG3 371 aa7.73□□□□□ -1.17
EDEM3-205ENST00000466606 MTMR7Q9Y216 660 aa7.73□□□□□ -1.17
EDEM3-205ENST00000466606 C2CD2LO14523 706 aa7.72□□□□□ -1.17
EDEM3-205ENST00000466606 OPLAHO14841 1288 aa7.72□□□□□ -1.17
EDEM3-205ENST00000466606 GRNP28799 593 aaKnown RBP7.72□□□□□ -1.17
EDEM3-205ENST00000466606 IER5Q5VY09 327 aa7.72□□□□□ -1.17
EDEM3-205ENST00000466606 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
EDEM3-205ENST00000466606 MBIPQ9NS73 344 aa7.72□□□□□ -1.17
EDEM3-205ENST00000466606 MARK1Q9P0L2 795 aa7.72□□□□□ -1.17
EDEM3-205ENST00000466606 BMP4P12644 408 aa7.71□□□□□ -1.18
EDEM3-205ENST00000466606 INPP5BP32019 993 aa7.71□□□□□ -1.18
EDEM3-205ENST00000466606 RAB44Q7Z6P3 723 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms