RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 ANKRD31Q8N7Z5 1873 aa12.7□□□□□ -0.38
RTFDC1-205ENST00000466260 NBPF26B4DH59 902 aa12.7□□□□□ -0.38
RTFDC1-205ENST00000466260 NFIXQ14938 502 aa12.7□□□□□ -0.38
RTFDC1-205ENST00000466260 TBC1D9BQ66K14 1250 aa12.7□□□□□ -0.38
RTFDC1-205ENST00000466260 NBPF10Q6P3W6 841 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-205ENST00000466260 NBPF15Q8N660 670 aa12.7□□□□□ -0.38
RTFDC1-205ENST00000466260 CD2APQ9Y5K6 639 aa12.7□□□□□ -0.38
RTFDC1-205ENST00000466260 POLRMTO00411 1230 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-205ENST00000466260 ANXA1P04083 346 aa12.69□□□□□ -0.38
RTFDC1-205ENST00000466260 PXDNLA1KZ92 1463 aa12.69□□□□□ -0.38
RTFDC1-205ENST00000466260 ANKRD36CQ5JPF3 1778 aa12.69□□□□□ -0.38
RTFDC1-205ENST00000466260 NPHP1O15259 732 aa12.68□□□□□ -0.38
RTFDC1-205ENST00000466260 CAMTA2O94983 1202 aa12.68□□□□□ -0.38
RTFDC1-205ENST00000466260 SERPINB2P05120 415 aa12.68□□□□□ -0.38
RTFDC1-205ENST00000466260 CCDC24Q8N4L8 307 aa12.68□□□□□ -0.38
RTFDC1-205ENST00000466260 MBIPQ9NS73 344 aa12.68□□□□□ -0.38
RTFDC1-205ENST00000466260 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
RTFDC1-205ENST00000466260 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
RTFDC1-205ENST00000466260 CARMIL3Q8ND23 1372 aa12.68□□□□□ -0.38
RTFDC1-205ENST00000466260 A0A0G2JLW4 131 aa12.67□□□□□ -0.38
RTFDC1-205ENST00000466260 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
RTFDC1-205ENST00000466260 CHL1O00533 1208 aa12.67□□□□□ -0.38
RTFDC1-205ENST00000466260 YBX3P16989 372 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■□□□□ 11.2
RTFDC1-205ENST00000466260 TM4SF1P30408 202 aa12.67□□□□□ -0.38
RTFDC1-205ENST00000466260 ELL2O00472 640 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-205ENST00000466260 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
RTFDC1-205ENST00000466260 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
RTFDC1-205ENST00000466260 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
RTFDC1-205ENST00000466260 BABAM1Q9NWV8 329 aa12.66□□□□□ -0.38
RTFDC1-205ENST00000466260 ARFGEF1Q9Y6D6 1849 aa12.66□□□□□ -0.38
RTFDC1-205ENST00000466260 DPEP1P16444 411 aa12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 CHRNA5P30532 468 aa12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 GNAI1P63096 354 aa12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 AIMP1Q12904 312 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 HLFQ16534 295 aa12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 KIF6Q6ZMV9 814 aa12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 TSR2Q969E8 191 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 IFT57Q9NWB7 429 aa12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
RTFDC1-205ENST00000466260 ARFGEF2Q9Y6D5 1785 aa12.64□□□□□ -0.39
RTFDC1-205ENST00000466260 YY1P25490 414 aa12.64□□□□□ -0.39
RTFDC1-205ENST00000466260 HDGFL1Q5TGJ6 251 aa12.64□□□□□ -0.39
RTFDC1-205ENST00000466260 DUSP27Q5VZP5 1158 aa12.64□□□□□ -0.39
RTFDC1-205ENST00000466260 SETDB2Q96T68 719 aa12.64□□□□□ -0.39
RTFDC1-205ENST00000466260 NIP7Q9Y221 180 aaKnown RBP eCLIP12.64□□□□□ -0.39
RTFDC1-205ENST00000466260 BCS1LQ9Y276 419 aa12.64□□□□□ -0.39
RTFDC1-205ENST00000466260 GPTP24298 496 aa12.63□□□□□ -0.39
RTFDC1-205ENST00000466260 TGFB2P61812 414 aa12.63□□□□□ -0.39
RTFDC1-205ENST00000466260 WWC1Q8IX03 1113 aa12.63□□□□□ -0.39
RTFDC1-205ENST00000466260 CHPF2Q9P2E5 772 aa12.63□□□□□ -0.39
RTFDC1-205ENST00000466260 TNRC6CQ9HCJ0 1690 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-205ENST00000466260 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
RTFDC1-205ENST00000466260 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
RTFDC1-205ENST00000466260 SPDYE2BA6NHP3 402 aa12.62□□□□□ -0.39
RTFDC1-205ENST00000466260 ZNF853P0CG23 659 aa12.62□□□□□ -0.39
RTFDC1-205ENST00000466260 SPDYE6P0CI01 402 aa12.62□□□□□ -0.39
RTFDC1-205ENST00000466260 PDIA6Q15084 440 aa12.62□□□□□ -0.39
RTFDC1-205ENST00000466260 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
RTFDC1-205ENST00000466260 PRR5LQ6MZQ0 368 aa12.62□□□□□ -0.39
RTFDC1-205ENST00000466260 CNBD1Q8NA66 436 aa12.62□□□□□ -0.39
RTFDC1-205ENST00000466260 CCDC88AQ3V6T2 1871 aa12.61□□□□□ -0.39
RTFDC1-205ENST00000466260 ST5P78524 1137 aa12.61□□□□□ -0.39
RTFDC1-205ENST00000466260 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-205ENST00000466260 XAGE3Q8WTP9 111 aa12.61□□□□□ -0.39
RTFDC1-205ENST00000466260 ZNF428Q96B54 188 aa12.61□□□□□ -0.39
RTFDC1-205ENST00000466260 UTRNP46939 3433 aa12.61□□□□□ -0.39
RTFDC1-205ENST00000466260 TCERG1O14776 1098 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-205ENST00000466260 GRIN3BO60391 1043 aa12.6□□□□□ -0.39
RTFDC1-205ENST00000466260 GTF2E1P29083 439 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-205ENST00000466260 CCDC27Q2M243 656 aa12.6□□□□□ -0.39
RTFDC1-205ENST00000466260 CLEC4GQ6UXB4 293 aa12.6□□□□□ -0.39
RTFDC1-205ENST00000466260 COPS6Q7L5N1 327 aa12.6□□□□□ -0.39
RTFDC1-205ENST00000466260 C2CD5Q86YS7 1000 aa12.6□□□□□ -0.39
RTFDC1-205ENST00000466260 C8orf58Q8NAV2 365 aa12.6□□□□□ -0.39
RTFDC1-205ENST00000466260 DDX21Q9NR30 783 aaKnown RBP eCLIP12.6□□□□□ -0.39
RTFDC1-205ENST00000466260 LAMB2P55268 1798 aa12.59□□□□□ -0.39
RTFDC1-205ENST00000466260 GOLGB1Q14789 3259 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-205ENST00000466260 NUTM1Q86Y26 1132 aa12.59□□□□□ -0.39
RTFDC1-205ENST00000466260 TSPYL6Q8N831 410 aa12.59□□□□□ -0.39
RTFDC1-205ENST00000466260 ZNF622Q969S3 477 aaKnown RBP eCLIP12.59□□□□□ -0.399e-9■□□□□ 9.6
RTFDC1-205ENST00000466260 PIM2Q9P1W9 311 aa12.59□□□□□ -0.39
RTFDC1-205ENST00000466260 HOXB7P09629 217 aa12.58□□□□□ -0.4
RTFDC1-205ENST00000466260 KCNA3P22001 575 aa12.58□□□□□ -0.4
RTFDC1-205ENST00000466260 LRP10Q7Z4F1 713 aa12.58□□□□□ -0.4
RTFDC1-205ENST00000466260 UBN2Q6ZU65 1347 aa12.58□□□□□ -0.4
RTFDC1-205ENST00000466260 FANCIQ9NVI1 1328 aa12.58□□□□□ -0.4
RTFDC1-205ENST00000466260 SLX4Q8IY92 1834 aa12.58□□□□□ -0.4
RTFDC1-205ENST00000466260 ATP10DQ9P241 1426 aa12.57□□□□□ -0.4
RTFDC1-205ENST00000466260 ERVV-1B6SEH8 477 aa12.57□□□□□ -0.4
RTFDC1-205ENST00000466260 H0YIN7 160 aa12.57□□□□□ -0.4
RTFDC1-205ENST00000466260 DALRD3Q5D0E6 543 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-205ENST00000466260 GIGYF2Q6Y7W6 1299 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-205ENST00000466260 ARHGAP27Q6ZUM4 889 aa12.57□□□□□ -0.4
RTFDC1-205ENST00000466260 PHAXQ9H814 394 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-205ENST00000466260 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-205ENST00000466260 SBF1O95248 1867 aa12.57□□□□□ -0.4
RTFDC1-205ENST00000466260 ABCC12Q96J65 1359 aa12.56□□□□□ -0.4
RTFDC1-205ENST00000466260 CCER2I3L3R5 266 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms