RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 MTFR1LQ9H019 292 aa12.76□□□□□ -0.37
ATG3-203ENST00000465980 CCNL1Q9UK58 526 aaPredicted RBP12.76□□□□□ -0.37
ATG3-203ENST00000465980 SOWAHBA6NEL2 793 aa12.75□□□□□ -0.37
ATG3-203ENST00000465980 EIF4A2Q14240 407 aaKnown RBP12.75□□□□□ -0.37
ATG3-203ENST00000465980 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
ATG3-203ENST00000465980 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
ATG3-203ENST00000465980 TFCP2L1Q9NZI6 479 aa12.75□□□□□ -0.37
ATG3-203ENST00000465980 KIAA1468Q9P260 1216 aa12.75□□□□□ -0.37
ATG3-203ENST00000465980 ITGBL1O95965 494 aaPredicted RBP12.74□□□□□ -0.37
ATG3-203ENST00000465980 COL24A1Q17RW2 1714 aa12.74□□□□□ -0.37
ATG3-203ENST00000465980 PALLDQ8WX93 1383 aa12.73□□□□□ -0.37
ATG3-203ENST00000465980 PNPLA7Q6ZV29 1317 aa12.73□□□□□ -0.37
ATG3-203ENST00000465980 CHD4Q14839 1912 aa12.73□□□□□ -0.37
ATG3-203ENST00000465980 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
ATG3-203ENST00000465980 MORC1Q86VD1 984 aa12.73□□□□□ -0.37
ATG3-203ENST00000465980 ZFRQ96KR1 1074 aaKnown RBP12.73□□□□□ -0.37
ATG3-203ENST00000465980 FHDC1Q9C0D6 1143 aaPredicted RBP12.73□□□□□ -0.37
ATG3-203ENST00000465980 SPG7Q9UQ90 795 aa12.73□□□□□ -0.37
ATG3-203ENST00000465980 VIRMAQ69YN4 1812 aaKnown RBP12.73□□□□□ -0.37
ATG3-203ENST00000465980 UBR3Q6ZT12 1888 aa12.72□□□□□ -0.37
ATG3-203ENST00000465980 C4BP0C0L5 1744 aa12.71□□□□□ -0.37
ATG3-203ENST00000465980 ARXQ96QS3 562 aa12.71□□□□□ -0.37
ATG3-203ENST00000465980 KNSTRNQ9Y448 316 aa12.71□□□□□ -0.37
ATG3-203ENST00000465980 ANP32CO43423 234 aa12.7□□□□□ -0.38
ATG3-203ENST00000465980 BCAMP50895 628 aa12.7□□□□□ -0.38
ATG3-203ENST00000465980 PDIA6Q15084 440 aa12.7□□□□□ -0.38
ATG3-203ENST00000465980 PIGBQ92521 554 aa12.7□□□□□ -0.38
ATG3-203ENST00000465980 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
ATG3-203ENST00000465980 PER1O15534 1290 aaPredicted RBP12.69□□□□□ -0.38
ATG3-203ENST00000465980 YY1P25490 414 aa12.69□□□□□ -0.38
ATG3-203ENST00000465980 SYT17Q9BSW7 474 aa12.69□□□□□ -0.38
ATG3-203ENST00000465980 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
ATG3-203ENST00000465980 PHKG2P15735 406 aa12.68□□□□□ -0.38
ATG3-203ENST00000465980 POLD1P28340 1107 aa12.68□□□□□ -0.38
ATG3-203ENST00000465980 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
ATG3-203ENST00000465980 MSL1Q68DK7 614 aa12.68□□□□□ -0.38
ATG3-203ENST00000465980 IFNL2Q8IZJ0 200 aa12.68□□□□□ -0.38
ATG3-203ENST00000465980 DDX12PQ92771 950 aa12.68□□□□□ -0.38
ATG3-203ENST00000465980 TMOD3Q9NYL9 352 aa12.68□□□□□ -0.38
ATG3-203ENST00000465980 COL23A1Q86Y22 540 aaPredicted RBP12.67□□□□□ -0.38
ATG3-203ENST00000465980 AEBP1Q8IUX7 1158 aa12.67□□□□□ -0.38
ATG3-203ENST00000465980 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
ATG3-203ENST00000465980 SMARCC1Q92922 1105 aaPredicted RBP12.67□□□□□ -0.38
ATG3-203ENST00000465980 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
ATG3-203ENST00000465980 AMER1Q5JTC6 1135 aaPredicted RBP12.66□□□□□ -0.38
ATG3-203ENST00000465980 ZNF530Q6P9A1 599 aaPredicted RBP12.66□□□□□ -0.38
ATG3-203ENST00000465980 SMIM5Q71RC9 77 aa12.66□□□□□ -0.38
ATG3-203ENST00000465980 AK7Q96M32 723 aa12.66□□□□□ -0.38
ATG3-203ENST00000465980 SEPT9Q9UHD8 586 aaPredicted RBP12.66□□□□□ -0.38
ATG3-203ENST00000465980 ASAP1Q9ULH1 1129 aa12.66□□□□□ -0.38
ATG3-203ENST00000465980 CC2D1BQ5T0F9 858 aaKnown RBP12.65□□□□□ -0.38
ATG3-203ENST00000465980 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
ATG3-203ENST00000465980 MYH14Q7Z406 1995 aaKnown RBP12.64□□□□□ -0.39
ATG3-203ENST00000465980 LOC102724428A0A0B4J2F2 783 aa12.64□□□□□ -0.39
ATG3-203ENST00000465980 SIK1P57059 783 aa12.64□□□□□ -0.39
ATG3-203ENST00000465980 NBR1Q14596 966 aa12.64□□□□□ -0.39
ATG3-203ENST00000465980 SULT6B1Q6IMI4 303 aa12.64□□□□□ -0.39
ATG3-203ENST00000465980 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
ATG3-203ENST00000465980 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
ATG3-203ENST00000465980 IRX2Q9BZI1 471 aaPredicted RBP12.64□□□□□ -0.39
ATG3-203ENST00000465980 COL5A3P25940 1745 aaPredicted RBP12.64□□□□□ -0.39
ATG3-203ENST00000465980 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
ATG3-203ENST00000465980 KDM6AO15550 1401 aaPredicted RBP12.63□□□□□ -0.39
ATG3-203ENST00000465980 PLEKHO1Q53GL0 409 aaPredicted RBP12.63□□□□□ -0.39
ATG3-203ENST00000465980 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
ATG3-203ENST00000465980 NPC1L1Q9UHC9 1359 aa12.62□□□□□ -0.39
ATG3-203ENST00000465980 CCER2I3L3R5 266 aa12.62□□□□□ -0.39
ATG3-203ENST00000465980 IL13P35225 146 aa12.62□□□□□ -0.39
ATG3-203ENST00000465980 C1orf141Q5JVX7 400 aa12.62□□□□□ -0.39
ATG3-203ENST00000465980 NLGN2Q8NFZ4 835 aa12.62□□□□□ -0.39
ATG3-203ENST00000465980 ATG3Q9NT62 314 aa12.62□□□□□ -0.39
ATG3-203ENST00000465980 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
ATG3-203ENST00000465980 ARIH1Q9Y4X5 557 aaPredicted RBP12.62□□□□□ -0.39
ATG3-203ENST00000465980 PLEKHG2Q9H7P9 1386 aa12.61□□□□□ -0.39
ATG3-203ENST00000465980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.61□□□□□ -0.39
ATG3-203ENST00000465980 MAP3K7O43318 606 aa12.61□□□□□ -0.39
ATG3-203ENST00000465980 HSP90AB1P08238 724 aaKnown RBP12.61□□□□□ -0.39
ATG3-203ENST00000465980 ATP6V1AP38606 617 aa12.61□□□□□ -0.39
ATG3-203ENST00000465980 MTHFSP49914 203 aa12.61□□□□□ -0.39
ATG3-203ENST00000465980 ITPK1Q13572 414 aa12.61□□□□□ -0.39
ATG3-203ENST00000465980 GPR162Q16538 588 aa12.61□□□□□ -0.39
ATG3-203ENST00000465980 PACS2Q86VP3 889 aa12.61□□□□□ -0.39
ATG3-203ENST00000465980 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
ATG3-203ENST00000465980 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
ATG3-203ENST00000465980 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.61□□□□□ -0.39
ATG3-203ENST00000465980 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
ATG3-203ENST00000465980 TSR3Q9UJK0 312 aaKnown RBP12.61□□□□□ -0.39
ATG3-203ENST00000465980 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
ATG3-203ENST00000465980 C4AP0C0L4 1744 aa12.6□□□□□ -0.39
ATG3-203ENST00000465980 KDRP35968 1356 aa12.6□□□□□ -0.39
ATG3-203ENST00000465980 ERVV-2B6SEH9 535 aa12.6□□□□□ -0.39
ATG3-203ENST00000465980 GNPATO15228 680 aa12.6□□□□□ -0.39
ATG3-203ENST00000465980 HMOX1P09601 288 aa12.6□□□□□ -0.39
ATG3-203ENST00000465980 CABP4P57796 275 aa12.6□□□□□ -0.39
ATG3-203ENST00000465980 RALBP1Q15311 655 aa12.6□□□□□ -0.39
ATG3-203ENST00000465980 AMOTQ4VCS5 1084 aa12.6□□□□□ -0.39
ATG3-203ENST00000465980 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
ATG3-203ENST00000465980 KCNC4Q03721 635 aa12.59□□□□□ -0.39
ATG3-203ENST00000465980 TSR1Q2NL82 804 aaKnown RBP12.59□□□□□ -0.39
ATG3-203ENST00000465980 TSKSQ9UJT2 592 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms