RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 RGPD1P0DJD0 1748 aa10.23□□□□□ -0.77
VPS8-218ENST00000465818 NWD2Q9ULI1 1742 aa10.23□□□□□ -0.77
VPS8-218ENST00000465818 RTL1A6NKG5 1358 aa10.23□□□□□ -0.77
VPS8-218ENST00000465818 CAMTA1Q9Y6Y1 1673 aa10.22□□□□□ -0.77
VPS8-218ENST00000465818 RRS1Q15050 365 aaKnown RBP10.22□□□□□ -0.77
VPS8-218ENST00000465818 DMRTA1Q5VZB9 504 aa10.22□□□□□ -0.77
VPS8-218ENST00000465818 NPM2Q86SE8 214 aaKnown RBP10.22□□□□□ -0.77
VPS8-218ENST00000465818 EMILIN1Q9Y6C2 1016 aa10.22□□□□□ -0.77
VPS8-218ENST00000465818 MAP3K19Q56UN5 1328 aa10.22□□□□□ -0.77
VPS8-218ENST00000465818 GCP02774 474 aa10.21□□□□□ -0.77
VPS8-218ENST00000465818 VAC14Q08AM6 782 aa10.21□□□□□ -0.77
VPS8-218ENST00000465818 MTMR2Q13614 643 aa10.21□□□□□ -0.77
VPS8-218ENST00000465818 AEBP1Q8IUX7 1158 aa10.21□□□□□ -0.77
VPS8-218ENST00000465818 KCNH5Q8NCM2 988 aa10.21□□□□□ -0.77
VPS8-218ENST00000465818 SYMPKQ92797 1274 aaKnown RBP10.21□□□□□ -0.77
VPS8-218ENST00000465818 CPDO75976 1380 aa10.21□□□□□ -0.78
VPS8-218ENST00000465818 FLT4P35916 1363 aa10.21□□□□□ -0.78
VPS8-218ENST00000465818 KIAA0232Q92628 1395 aa10.21□□□□□ -0.78
VPS8-218ENST00000465818 WNK3Q9BYP7 1800 aa10.21□□□□□ -0.78
VPS8-218ENST00000465818 FUT2Q10981 343 aa10.2□□□□□ -0.78
VPS8-218ENST00000465818 WWC1Q8IX03 1113 aa10.2□□□□□ -0.78
VPS8-218ENST00000465818 FBXO41Q8TF61 875 aa10.2□□□□□ -0.78
VPS8-218ENST00000465818 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.2□□□□□ -0.78
VPS8-218ENST00000465818 PRM3Q9NNZ6 103 aa10.2□□□□□ -0.78
VPS8-218ENST00000465818 POLKQ9UBT6 870 aa10.2□□□□□ -0.78
VPS8-218ENST00000465818 RABGEF1Q9UJ41 708 aa10.2□□□□□ -0.78
VPS8-218ENST00000465818 BLMP54132 1417 aaPredicted RBP10.19□□□□□ -0.78
VPS8-218ENST00000465818 KIF24Q5T7B8 1368 aa10.19□□□□□ -0.78
VPS8-218ENST00000465818 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.19□□□□□ -0.78
VPS8-218ENST00000465818 PPM1GO15355 546 aaPredicted RBP10.19□□□□□ -0.78
VPS8-218ENST00000465818 MTHFSP49914 203 aa10.19□□□□□ -0.78
VPS8-218ENST00000465818 ZC3H6P61129 1189 aaKnown RBP10.19□□□□□ -0.78
VPS8-218ENST00000465818 CCDC184Q52MB2 194 aa10.19□□□□□ -0.78
VPS8-218ENST00000465818 KCTD17Q8N5Z5 321 aa10.19□□□□□ -0.78
VPS8-218ENST00000465818 ALG2Q9H553 416 aa10.19□□□□□ -0.78
VPS8-218ENST00000465818 MAMSTRQ6ZN01 415 aa10.18□□□□□ -0.78
VPS8-218ENST00000465818 ARHGEF25Q86VW2 580 aa10.18□□□□□ -0.78
VPS8-218ENST00000465818 AXIN2Q9Y2T1 843 aa10.18□□□□□ -0.78
VPS8-218ENST00000465818 COL5A2P05997 1499 aaPredicted RBP10.17□□□□□ -0.78
VPS8-218ENST00000465818 SPATA31A6Q5VVP1 1343 aa10.17□□□□□ -0.78
VPS8-218ENST00000465818 CCER2I3L3R5 266 aa10.17□□□□□ -0.78
VPS8-218ENST00000465818 HOXC9P31274 260 aa10.17□□□□□ -0.78
VPS8-218ENST00000465818 AMPHP49418 695 aa10.17□□□□□ -0.78
VPS8-218ENST00000465818 CHRNA2Q15822 529 aa10.17□□□□□ -0.78
VPS8-218ENST00000465818 UCN2Q96RP3 112 aa10.17□□□□□ -0.78
VPS8-218ENST00000465818 MRS2Q9HD23 443 aa10.17□□□□□ -0.78
VPS8-218ENST00000465818 PRDM11Q9NQV5 511 aa10.17□□□□□ -0.78
VPS8-218ENST00000465818 CCDC9Q9Y3X0 531 aaKnown RBP10.17□□□□□ -0.78
VPS8-218ENST00000465818 INSRP06213 1382 aa10.16□□□□□ -0.78
VPS8-218ENST00000465818 CARNS1A5YM72 827 aa10.16□□□□□ -0.78
VPS8-218ENST00000465818 RFX1P22670 979 aa10.16□□□□□ -0.78
VPS8-218ENST00000465818 SAMD7Q7Z3H4 446 aa10.16□□□□□ -0.78
VPS8-218ENST00000465818 TSC1Q92574 1164 aa10.16□□□□□ -0.78
VPS8-218ENST00000465818 CFAP53Q96M91 514 aa10.16□□□□□ -0.78
VPS8-218ENST00000465818 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
VPS8-218ENST00000465818 ADAMTS2O95450 1211 aa10.15□□□□□ -0.78
VPS8-218ENST00000465818 CFHP08603 1231 aa10.15□□□□□ -0.78
VPS8-218ENST00000465818 WASHC4Q2M389 1173 aa10.15□□□□□ -0.78
VPS8-218ENST00000465818 PRR7Q8TB68 274 aa10.15□□□□□ -0.78
VPS8-218ENST00000465818 PBXIP1Q96AQ6 731 aa10.15□□□□□ -0.78
VPS8-218ENST00000465818 PPP1R12CQ9BZL4 782 aa10.15□□□□□ -0.78
VPS8-218ENST00000465818 PARP4Q9UKK3 1724 aaKnown RBP10.15□□□□□ -0.78
VPS8-218ENST00000465818 SLIT2O94813 1529 aa10.14□□□□□ -0.79
VPS8-218ENST00000465818 C6orf229H3BNL8 230 aa10.14□□□□□ -0.79
VPS8-218ENST00000465818 ARHGAP33O14559 1287 aa10.14□□□□□ -0.79
VPS8-218ENST00000465818 SNPHO15079 494 aa10.14□□□□□ -0.79
VPS8-218ENST00000465818 NR6A1Q15406 480 aa10.14□□□□□ -0.79
VPS8-218ENST00000465818 FAM98CQ17RN3 349 aaKnown RBP10.14□□□□□ -0.79
VPS8-218ENST00000465818 HSP90AB2PQ58FF8 381 aa10.14□□□□□ -0.79
VPS8-218ENST00000465818 IP6K1Q92551 441 aa10.14□□□□□ -0.79
VPS8-218ENST00000465818 DLG5Q8TDM6 1919 aa10.13□□□□□ -0.79
VPS8-218ENST00000465818 ERBB3P21860 1342 aa10.13□□□□□ -0.79
VPS8-218ENST00000465818 VIRMAQ69YN4 1812 aaKnown RBP10.13□□□□□ -0.79
VPS8-218ENST00000465818 EIF4A2Q14240 407 aaKnown RBP10.13□□□□□ -0.79
VPS8-218ENST00000465818 HELBQ8NG08 1087 aaPredicted RBP10.13□□□□□ -0.79
VPS8-218ENST00000465818 LTV1Q96GA3 475 aaPredicted RBP10.13□□□□□ -0.79
VPS8-218ENST00000465818 VPS9D1Q9Y2B5 631 aa10.13□□□□□ -0.79
VPS8-218ENST00000465818 NCAPD2Q15021 1401 aa10.13□□□□□ -0.79
VPS8-218ENST00000465818 PKD1L3Q7Z443 1732 aa10.13□□□□□ -0.79
VPS8-218ENST00000465818 PALM3A6NDB9 673 aaPredicted RBP10.12□□□□□ -0.79
VPS8-218ENST00000465818 DIAPH1O60610 1272 aaKnown RBP10.12□□□□□ -0.79
VPS8-218ENST00000465818 ANKRD24Q8TF21 1146 aa10.12□□□□□ -0.79
VPS8-218ENST00000465818 SHANK3Q9BYB0 1731 aa10.12□□□□□ -0.79
VPS8-218ENST00000465818 FAM83GA6ND36 823 aa10.11□□□□□ -0.79
VPS8-218ENST00000465818 BHMG1C9JSJ3 638 aaPredicted RBP10.11□□□□□ -0.79
VPS8-218ENST00000465818 U2SURPO15042 1029 aaKnown RBP10.11□□□□□ -0.79
VPS8-218ENST00000465818 IL13P35225 146 aa10.11□□□□□ -0.79
VPS8-218ENST00000465818 WDR43Q15061 677 aaKnown RBP eCLIP10.11□□□□□ -0.79
VPS8-218ENST00000465818 VARS2Q5ST30 1063 aaKnown RBP10.11□□□□□ -0.79
VPS8-218ENST00000465818 MEX3CQ5U5Q3 659 aaKnown RBP10.11□□□□□ -0.79
VPS8-218ENST00000465818 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
VPS8-218ENST00000465818 C8orf37Q96NL8 207 aa10.11□□□□□ -0.79
VPS8-218ENST00000465818 IGSF1Q8N6C5 1336 aa10.1□□□□□ -0.79
VPS8-218ENST00000465818 ATP6V1AP38606 617 aa10.1□□□□□ -0.79
VPS8-218ENST00000465818 GZF1Q9H116 711 aaPredicted RBP10.1□□□□□ -0.79
VPS8-218ENST00000465818 BTG4Q9NY30 223 aa10.1□□□□□ -0.79
VPS8-218ENST00000465818 LRRC37A3O60309 1634 aa10.1□□□□□ -0.79
VPS8-218ENST00000465818 WDR17Q8IZU2 1322 aa10.09□□□□□ -0.79
VPS8-218ENST00000465818 CRB1P82279 1406 aa10.09□□□□□ -0.79
VPS8-218ENST00000465818 CSB-PGBD3P0DP91 1061 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms