RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 C9orf131Q5VYM1 1079 aa33.98■■■■□ 3.03
U2AF1-206ENST00000464750 CACNA1SQ13698 1873 aa33.98■■■■□ 3.03
U2AF1-206ENST00000464750 RGL2O15211 777 aa33.97■■■■□ 3.03
U2AF1-206ENST00000464750 NEUROD2Q15784 382 aa33.97■■■■□ 3.03
U2AF1-206ENST00000464750 ADAMTS8Q9UP79 889 aa33.97■■■■□ 3.03
U2AF1-206ENST00000464750 PDZRN3Q9UPQ7 1066 aa33.97■■■■□ 3.03
U2AF1-206ENST00000464750 NUP98P52948 1817 aa33.97■■■■□ 3.03
U2AF1-206ENST00000464750 NBPF5PQ86XG9 351 aaPredicted RBP33.95■■■■□ 3.03
U2AF1-206ENST00000464750 NGEFQ8N5V2 710 aa33.95■■■■□ 3.03
U2AF1-206ENST00000464750 ZNF622Q969S3 477 aaKnown RBP eCLIP33.94■■■■□ 3.02
U2AF1-206ENST00000464750 BABAM1Q9NWV8 329 aa33.94■■■■□ 3.02
U2AF1-206ENST00000464750 NIP7Q9Y221 180 aaKnown RBP eCLIP33.94■■■■□ 3.02
U2AF1-206ENST00000464750 ARFGEF2Q9Y6D5 1785 aa33.93■■■■□ 3.02
U2AF1-206ENST00000464750 HLFQ16534 295 aa33.93■■■■□ 3.02
U2AF1-206ENST00000464750 RNF181Q9P0P0 153 aa33.93■■■■□ 3.02
U2AF1-206ENST00000464750 SENP3-EIF4A1A0A087X0R7 540 aa33.92■■■■□ 3.02
U2AF1-206ENST00000464750 MYL6BP14649 208 aa33.92■■■■□ 3.02
U2AF1-206ENST00000464750 RASSF7Q02833 373 aa33.92■■■■□ 3.02
U2AF1-206ENST00000464750 ERBB4Q15303 1308 aa33.91■■■■□ 3.02
U2AF1-206ENST00000464750 TRIM35Q9UPQ4 493 aa33.9■■■■□ 3.02
U2AF1-206ENST00000464750 CCDC88AQ3V6T2 1871 aa33.9■■■■□ 3.02
U2AF1-206ENST00000464750 MAP3K15Q6ZN16 1313 aa33.89■■■■□ 3.02
U2AF1-206ENST00000464750 KIF6Q6ZMV9 814 aa33.89■■■■□ 3.02
U2AF1-206ENST00000464750 TTLL7Q6ZT98 887 aa33.89■■■■□ 3.02
U2AF1-206ENST00000464750 SLX4Q8IY92 1834 aa33.88■■■■□ 3.01
U2AF1-206ENST00000464750 FAM177BA6PVY3 158 aa33.87■■■■□ 3.01
U2AF1-206ENST00000464750 ERVV-1B6SEH8 477 aa33.87■■■■□ 3.01
U2AF1-206ENST00000464750 KIF3CO14782 793 aa33.87■■■■□ 3.01
U2AF1-206ENST00000464750 TIAM2Q8IVF5 1701 aa33.87■■■■□ 3.01
U2AF1-206ENST00000464750 SRGNP10124 158 aa33.86■■■■□ 3.01
U2AF1-206ENST00000464750 TPTE2Q6XPS3 522 aa33.86■■■■□ 3.01
U2AF1-206ENST00000464750 FER1L6Q2WGJ9 1857 aa33.86■■■■□ 3.01
U2AF1-206ENST00000464750 EIF2S2P20042 333 aaKnown RBP33.85■■■■□ 3.01
U2AF1-206ENST00000464750 STYK1Q6J9G0 422 aa33.85■■■■□ 3.01
U2AF1-206ENST00000464750 TNRC6CQ9HCJ0 1690 aaKnown RBP33.84■■■■□ 3.01
U2AF1-206ENST00000464750 MASTLQ96GX5 879 aa33.84■■■■□ 3.01
U2AF1-206ENST00000464750 ZBTB3Q9H5J0 574 aa33.84■■■■□ 3.01
U2AF1-206ENST00000464750 ZNF219Q9P2Y4 722 aaPredicted RBP33.84■■■■□ 3.01
U2AF1-206ENST00000464750 NFKBIEO00221 500 aa33.83■■■■□ 3.01
U2AF1-206ENST00000464750 C21orf2O43822 256 aa33.83■■■■□ 3.01
U2AF1-206ENST00000464750 CNKSR1Q969H4 720 aa33.83■■■■□ 3.01
U2AF1-206ENST00000464750 LAS1LQ9Y4W2 734 aaKnown RBP33.83■■■■□ 3.01
U2AF1-206ENST00000464750 CHL1O00533 1208 aa33.82■■■■□ 3
U2AF1-206ENST00000464750 LMNB1P20700 586 aa33.82■■■■□ 3
U2AF1-206ENST00000464750 PRELPP51888 382 aa33.81■■■■□ 3
U2AF1-206ENST00000464750 PDIA6Q15084 440 aa33.81■■■■□ 3
U2AF1-206ENST00000464750 NMRK2Q9NPI5 230 aa33.81■■■■□ 3
U2AF1-206ENST00000464750 PRPF40BQ6NWY9 871 aaKnown RBP33.8■■■■□ 3
U2AF1-206ENST00000464750 LRP10Q7Z4F1 713 aa33.8■■■■□ 3
U2AF1-206ENST00000464750 GTF2E1P29083 439 aaPredicted RBP33.79■■■■□ 3
U2AF1-206ENST00000464750 PROSER3Q2NL68 480 aa33.79■■■■□ 3
U2AF1-206ENST00000464750 ZC3H4Q9UPT8 1303 aaKnown RBP33.79■■■■□ 3
U2AF1-206ENST00000464750 ABCC12Q96J65 1359 aa33.78■■■■□ 3
U2AF1-206ENST00000464750 ANXA1P04083 346 aa33.78■■■■□ 3
U2AF1-206ENST00000464750 GPTP24298 496 aa33.78■■■■□ 3
U2AF1-206ENST00000464750 KRT24Q2M2I5 525 aa33.78■■■■□ 3
U2AF1-206ENST00000464750 NECTIN2Q92692 538 aa33.78■■■■□ 3
U2AF1-206ENST00000464750 NYXQ9GZU5 481 aa33.78■■■■□ 3
U2AF1-206ENST00000464750 DICER1Q9UPY3 1922 aaKnown RBP33.78■■■■□ 3
U2AF1-206ENST00000464750 UBN2Q6ZU65 1347 aa33.78■■■■□ 3
U2AF1-206ENST00000464750 KDM2BQ8NHM5 1336 aa33.78■■■■□ 3
U2AF1-206ENST00000464750 IBTKQ9P2D0 1353 aaPredicted RBP33.77■■■■□ 3
U2AF1-206ENST00000464750 KLRG2A4D1S0 409 aaPredicted RBP33.77■■■■□ 3
U2AF1-206ENST00000464750 ANKRD36CQ5JPF3 1778 aa33.77■■■■□ 3
U2AF1-206ENST00000464750 APAF1O14727 1248 aa33.76■■■□□ 2.99
U2AF1-206ENST00000464750 NPR1P16066 1061 aa33.76■■■□□ 2.99
U2AF1-206ENST00000464750 GIGYF2Q6Y7W6 1299 aaKnown RBP33.76■■■□□ 2.99
U2AF1-206ENST00000464750 NUTM1Q86Y26 1132 aa33.75■■■□□ 2.99
U2AF1-206ENST00000464750 ZNF34Q8IZ26 560 aa33.73■■■□□ 2.99
U2AF1-206ENST00000464750 CFAP44Q96MT7 982 aa33.73■■■□□ 2.99
U2AF1-206ENST00000464750 ZNF316A6NFI3 1004 aaPredicted RBP33.72■■■□□ 2.99
U2AF1-206ENST00000464750 SOGA3Q5TF21 947 aa33.72■■■□□ 2.99
U2AF1-206ENST00000464750 TAOK3Q9H2K8 898 aa33.72■■■□□ 2.99
U2AF1-206ENST00000464750 RIC1Q4ADV7 1423 aa33.71■■■□□ 2.99
U2AF1-206ENST00000464750 ERFEQ4G0M1 354 aa33.71■■■□□ 2.99
U2AF1-206ENST00000464750 CCDC184Q52MB2 194 aa33.71■■■□□ 2.99
U2AF1-206ENST00000464750 SUSD4Q5VX71 490 aa33.71■■■□□ 2.99
U2AF1-206ENST00000464750 LTBP3Q9NS15 1303 aa33.71■■■□□ 2.99
U2AF1-206ENST00000464750 TOMM70O94826 608 aa33.7■■■□□ 2.99
U2AF1-206ENST00000464750 DDX21Q9NR30 783 aaKnown RBP eCLIP33.7■■■□□ 2.99
U2AF1-206ENST00000464750 XAGE3Q8WTP9 111 aa33.69■■■□□ 2.98
U2AF1-206ENST00000464750 NTSR2O95665 410 aa33.68■■■□□ 2.98
U2AF1-206ENST00000464750 HOXB7P09629 217 aa33.68■■■□□ 2.98
U2AF1-206ENST00000464750 AIMP1Q12904 312 aaKnown RBP33.68■■■□□ 2.98
U2AF1-206ENST00000464750 HDGFL1Q5TGJ6 251 aa33.68■■■□□ 2.98
U2AF1-206ENST00000464750 COPS6Q7L5N1 327 aa33.68■■■□□ 2.98
U2AF1-206ENST00000464750 MBIPQ9NS73 344 aa33.68■■■□□ 2.98
U2AF1-206ENST00000464750 HSPA6P17066 643 aa33.67■■■□□ 2.98
U2AF1-206ENST00000464750 PARP10Q53GL7 1025 aa33.67■■■□□ 2.98
U2AF1-206ENST00000464750 CCDC93Q567U6 631 aa33.67■■■□□ 2.98
U2AF1-206ENST00000464750 C7orf43Q8WVR3 580 aa33.67■■■□□ 2.98
U2AF1-206ENST00000464750 CHPF2Q9P2E5 772 aa33.67■■■□□ 2.98
U2AF1-206ENST00000464750 CRY2Q49AN0 593 aa33.66■■■□□ 2.98
U2AF1-206ENST00000464750 RRAGCQ9HB90 399 aa33.66■■■□□ 2.98
U2AF1-206ENST00000464750 ZNF853P0CG23 659 aa33.65■■■□□ 2.98
U2AF1-206ENST00000464750 CALD1Q05682 793 aaKnown RBP33.65■■■□□ 2.98
U2AF1-206ENST00000464750 PPP1R42Q7Z4L9 355 aa33.65■■■□□ 2.98
U2AF1-206ENST00000464750 C16orf71Q8IYS4 520 aaPredicted RBP33.65■■■□□ 2.98
U2AF1-206ENST00000464750 IFT57Q9NWB7 429 aa33.65■■■□□ 2.98
U2AF1-206ENST00000464750 GLTPD2A6NH11 291 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms