RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 MAP3K15Q6ZN16 1313 aa21.18■□□□□ 0.98
SSNA1-204ENST00000464553 EIF2S2P20042 333 aaKnown RBP21.17■□□□□ 0.98
SSNA1-204ENST00000464553 ST5P78524 1137 aa21.17■□□□□ 0.98
SSNA1-204ENST00000464553 PDIA6Q15084 440 aa21.17■□□□□ 0.98
SSNA1-204ENST00000464553 NGEFQ8N5V2 710 aa21.17■□□□□ 0.98
SSNA1-204ENST00000464553 KIAA1551Q9HCM1 1747 aa21.17■□□□□ 0.98
SSNA1-204ENST00000464553 NPHP1O15259 732 aa21.16■□□□□ 0.98
SSNA1-204ENST00000464553 MYL6BP14649 208 aa21.16■□□□□ 0.98
SSNA1-204ENST00000464553 CHRNA5P30532 468 aa21.16■□□□□ 0.98
SSNA1-204ENST00000464553 NBPF5PQ86XG9 351 aaPredicted RBP21.16■□□□□ 0.98
SSNA1-204ENST00000464553 ZNF784Q8NCA9 323 aaPredicted RBP21.16■□□□□ 0.98
SSNA1-204ENST00000464553 DDX21Q9NR30 783 aaKnown RBP eCLIP21.16■□□□□ 0.98
SSNA1-204ENST00000464553 NIP7Q9Y221 180 aaKnown RBP eCLIP21.16■□□□□ 0.98
SSNA1-204ENST00000464553 LRP10Q7Z4F1 713 aa21.15■□□□□ 0.98
SSNA1-204ENST00000464553 TTLL6Q8N841 843 aa21.15■□□□□ 0.98
SSNA1-204ENST00000464553 MBIPQ9NS73 344 aa21.15■□□□□ 0.98
SSNA1-204ENST00000464553 HLFQ16534 295 aa21.14■□□□□ 0.97
SSNA1-204ENST00000464553 GIGYF2Q6Y7W6 1299 aaKnown RBP21.14■□□□□ 0.97
SSNA1-204ENST00000464553 C2CD5Q86YS7 1000 aa21.14■□□□□ 0.97
SSNA1-204ENST00000464553 NYXQ9GZU5 481 aa21.14■□□□□ 0.97
SSNA1-204ENST00000464553 AFDNP55196 1824 aaKnown RBP21.13■□□□□ 0.97
SSNA1-204ENST00000464553 BCORQ6W2J9 1755 aa21.13■□□□□ 0.97
SSNA1-204ENST00000464553 TTLL7Q6ZT98 887 aa21.13■□□□□ 0.97
SSNA1-204ENST00000464553 ARHGAP27Q6ZUM4 889 aa21.13■□□□□ 0.97
SSNA1-204ENST00000464553 DBF4Q9UBU7 674 aaPredicted RBP21.13■□□□□ 0.97
SSNA1-204ENST00000464553 N4BP2Q86UW6 1770 aaPredicted RBP21.13■□□□□ 0.97
SSNA1-204ENST00000464553 ATP10DQ9P241 1426 aa21.12■□□□□ 0.97
SSNA1-204ENST00000464553 IL16Q14005 1332 aa21.12■□□□□ 0.97
SSNA1-204ENST00000464553 KLRG2A4D1S0 409 aaPredicted RBP21.12■□□□□ 0.97
SSNA1-204ENST00000464553 WWC1Q8IX03 1113 aa21.12■□□□□ 0.97
SSNA1-204ENST00000464553 WWC3Q9ULE0 1092 aa21.12■□□□□ 0.97
SSNA1-204ENST00000464553 HDGFL1Q5TGJ6 251 aa21.11■□□□□ 0.97
SSNA1-204ENST00000464553 DUSP27Q5VZP5 1158 aa21.11■□□□□ 0.97
SSNA1-204ENST00000464553 STYK1Q6J9G0 422 aa21.11■□□□□ 0.97
SSNA1-204ENST00000464553 ZNF34Q8IZ26 560 aa21.11■□□□□ 0.97
SSNA1-204ENST00000464553 PARP10Q53GL7 1025 aa21.1■□□□□ 0.97
SSNA1-204ENST00000464553 HSP90AB3PQ58FF7 597 aa21.1■□□□□ 0.97
SSNA1-204ENST00000464553 CNKSR1Q969H4 720 aa21.1■□□□□ 0.97
SSNA1-204ENST00000464553 HYPKQ9NX55 129 aa21.1■□□□□ 0.97
SSNA1-204ENST00000464553 IBTKQ9P2D0 1353 aaPredicted RBP21.1■□□□□ 0.97
SSNA1-204ENST00000464553 SRGNP10124 158 aa21.09■□□□□ 0.97
SSNA1-204ENST00000464553 GTF2E1P29083 439 aaPredicted RBP21.09■□□□□ 0.97
SSNA1-204ENST00000464553 COPS6Q7L5N1 327 aa21.09■□□□□ 0.97
SSNA1-204ENST00000464553 MASTLQ96GX5 879 aa21.09■□□□□ 0.97
SSNA1-204ENST00000464553 BRCA1P38398 1863 aaKnown RBP21.09■□□□□ 0.97
SSNA1-204ENST00000464553 KRT24Q2M2I5 525 aa21.08■□□□□ 0.97
SSNA1-204ENST00000464553 PPP1R42Q7Z4L9 355 aa21.08■□□□□ 0.97
SSNA1-204ENST00000464553 WDR63Q8IWG1 891 aa21.08■□□□□ 0.97
SSNA1-204ENST00000464553 ZBTB3Q9H5J0 574 aa21.08■□□□□ 0.97
SSNA1-204ENST00000464553 PROSER3Q2NL68 480 aa21.07■□□□□ 0.96
SSNA1-204ENST00000464553 ZNF622Q969S3 477 aaKnown RBP eCLIP21.07■□□□□ 0.96
SSNA1-204ENST00000464553 RNF123Q5XPI4 1314 aa21.06■□□□□ 0.96
SSNA1-204ENST00000464553 NPR1P16066 1061 aa21.06■□□□□ 0.96
SSNA1-204ENST00000464553 SOGA3Q5TF21 947 aa21.06■□□□□ 0.96
SSNA1-204ENST00000464553 XAGE3Q8WTP9 111 aa21.06■□□□□ 0.96
SSNA1-204ENST00000464553 NECTIN2Q92692 538 aa21.06■□□□□ 0.96
SSNA1-204ENST00000464553 CHPF2Q9P2E5 772 aa21.06■□□□□ 0.96
SSNA1-204ENST00000464553 ADCY9O60503 1353 aa21.06■□□□□ 0.96
SSNA1-204ENST00000464553 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
SSNA1-204ENST00000464553 ANKRD13DQ6ZTN6 518 aa21.05■□□□□ 0.96
SSNA1-204ENST00000464553 PLBD2Q8NHP8 589 aa21.05■□□□□ 0.96
SSNA1-204ENST00000464553 UTRNP46939 3433 aa21.04■□□□□ 0.96
SSNA1-204ENST00000464553 ALDH1B1P30837 517 aa21.04■□□□□ 0.96
SSNA1-204ENST00000464553 TCIRG1Q13488 830 aa21.04■□□□□ 0.96
SSNA1-204ENST00000464553 CCDC30Q5VVM6 783 aa21.04■□□□□ 0.96
SSNA1-204ENST00000464553 CCDC24Q8N4L8 307 aa21.04■□□□□ 0.96
SSNA1-204ENST00000464553 RIC1Q4ADV7 1423 aa21.04■□□□□ 0.96
SSNA1-204ENST00000464553 ANXA1P04083 346 aa21.03■□□□□ 0.96
SSNA1-204ENST00000464553 AIMP1Q12904 312 aaKnown RBP21.03■□□□□ 0.96
SSNA1-204ENST00000464553 SLC10A5Q5PT55 438 aa21.03■□□□□ 0.96
SSNA1-204ENST00000464553 SUSD4Q5VX71 490 aa21.03■□□□□ 0.96
SSNA1-204ENST00000464553 FAM9BQ8IZU0 186 aa21.03■□□□□ 0.96
SSNA1-204ENST00000464553 C8orf58Q8NAV2 365 aa21.03■□□□□ 0.96
SSNA1-204ENST00000464553 DLEC1Q9Y238 1755 aa21.02■□□□□ 0.96
SSNA1-204ENST00000464553 GPTP24298 496 aa21.02■□□□□ 0.96
SSNA1-204ENST00000464553 UTP14AQ9BVJ6 771 aaKnown RBP21.02■□□□□ 0.96
SSNA1-204ENST00000464553 UBN2Q6ZU65 1347 aa21.02■□□□□ 0.95
SSNA1-204ENST00000464553 GOLGB1Q14789 3259 aaKnown RBP21.01■□□□□ 0.95
SSNA1-204ENST00000464553 FAM177BA6PVY3 158 aa21.01■□□□□ 0.95
SSNA1-204ENST00000464553 NTSR2O95665 410 aa21.01■□□□□ 0.95
SSNA1-204ENST00000464553 CRY2Q49AN0 593 aa21.01■□□□□ 0.95
SSNA1-204ENST00000464553 NUP98P52948 1817 aa21.01■□□□□ 0.95
SSNA1-204ENST00000464553 ZC3H4Q9UPT8 1303 aaKnown RBP21.01■□□□□ 0.95
SSNA1-204ENST00000464553 ELL2O00472 640 aaPredicted RBP21■□□□□ 0.95
SSNA1-204ENST00000464553 LMNB1P20700 586 aa21■□□□□ 0.95
SSNA1-204ENST00000464553 HOXA10P31260 410 aaPredicted RBP21■□□□□ 0.95
SSNA1-204ENST00000464553 TRIM28Q13263 835 aaKnown RBP21■□□□□ 0.95
SSNA1-204ENST00000464553 C9orf131Q5VYM1 1079 aa21■□□□□ 0.95
SSNA1-204ENST00000464553 ANKRD31Q8N7Z5 1873 aa21■□□□□ 0.95
SSNA1-204ENST00000464553 ERFEQ4G0M1 354 aa20.99■□□□□ 0.95
SSNA1-204ENST00000464553 PRPF40BQ6NWY9 871 aaKnown RBP20.99■□□□□ 0.95
SSNA1-204ENST00000464553 NLRP10Q86W26 655 aa20.99■□□□□ 0.95
SSNA1-204ENST00000464553 GPBP1L1Q9HC44 474 aaPredicted RBP20.99■□□□□ 0.95
SSNA1-204ENST00000464553 LTBP3Q9NS15 1303 aa20.99■□□□□ 0.95
SSNA1-204ENST00000464553 CCER2I3L3R5 266 aa20.98■□□□□ 0.95
SSNA1-204ENST00000464553 C21orf2O43822 256 aa20.98■□□□□ 0.95
SSNA1-204ENST00000464553 NUTM1Q86Y26 1132 aa20.98■□□□□ 0.95
SSNA1-204ENST00000464553 C7orf43Q8WVR3 580 aa20.98■□□□□ 0.95
SSNA1-204ENST00000464553 NLRP3Q96P20 1036 aa20.98■□□□□ 0.95
SSNA1-204ENST00000464553 GRIPAP1Q4V328 841 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms