RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 C11orf91Q3C1V1 193 aa6.35□□□□□ -1.39
HMGXB4-205ENST00000464480 NOM1Q5C9Z4 860 aaKnown RBP6.35□□□□□ -1.39
HMGXB4-205ENST00000464480 ZFP42Q96MM3 310 aa6.35□□□□□ -1.39
HMGXB4-205ENST00000464480 TIMMDC1Q9NPL8 285 aa6.35□□□□□ -1.39
HMGXB4-205ENST00000464480 RHOQP17081 205 aa6.34□□□□□ -1.39
HMGXB4-205ENST00000464480 ARHGAP4P98171 946 aa6.34□□□□□ -1.39
HMGXB4-205ENST00000464480 AAMPQ13685 434 aa6.34□□□□□ -1.39
HMGXB4-205ENST00000464480 BICDL1Q6ZP65 573 aa6.34□□□□□ -1.39
HMGXB4-205ENST00000464480 FIGNL2A6NMB9 653 aa6.33□□□□□ -1.4
HMGXB4-205ENST00000464480 POTECB2RU33 542 aa6.33□□□□□ -1.4
HMGXB4-205ENST00000464480 MAN1A2O60476 641 aa6.33□□□□□ -1.4
HMGXB4-205ENST00000464480 EIF1AXP47813 144 aaKnown RBP6.33□□□□□ -1.4
HMGXB4-205ENST00000464480 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.33□□□□□ -1.41e-6■□□□□ 9.6
HMGXB4-205ENST00000464480 ZSCAN29Q8IWY8 852 aaPredicted RBP6.33□□□□□ -1.4
HMGXB4-205ENST00000464480 KLK14Q9P0G3 267 aa6.33□□□□□ -1.4
HMGXB4-205ENST00000464480 BRPF3Q9ULD4 1205 aa6.33□□□□□ -1.4
HMGXB4-205ENST00000464480 TGFBR3LH3BV60 316 aa6.32□□□□□ -1.4
HMGXB4-205ENST00000464480 ATP4AP20648 1035 aa6.32□□□□□ -1.4
HMGXB4-205ENST00000464480 ECM1Q16610 540 aa6.32□□□□□ -1.4
HMGXB4-205ENST00000464480 ARSJQ5FYB0 599 aaPredicted RBP6.32□□□□□ -1.4
HMGXB4-205ENST00000464480 IFT43Q96FT9 208 aa6.32□□□□□ -1.4
HMGXB4-205ENST00000464480 NEUROD4Q9HD90 331 aa6.32□□□□□ -1.4
HMGXB4-205ENST00000464480 ANKIB1Q9P2G1 1089 aa6.32□□□□□ -1.4
HMGXB4-205ENST00000464480 DNMT3LQ9UJW3 386 aa6.32□□□□□ -1.4
HMGXB4-205ENST00000464480 MSX1P28360 303 aa6.31□□□□□ -1.4
HMGXB4-205ENST00000464480 IER5Q5VY09 327 aa6.31□□□□□ -1.4
HMGXB4-205ENST00000464480 DNAJC14Q6Y2X3 702 aaPredicted RBP6.31□□□□□ -1.4
HMGXB4-205ENST00000464480 TREML1Q86YW5 311 aa6.31□□□□□ -1.4
HMGXB4-205ENST00000464480 ETFBKMTQ8IXQ9 262 aa6.31□□□□□ -1.4
HMGXB4-205ENST00000464480 ASB16Q96NS5 453 aa6.31□□□□□ -1.4
HMGXB4-205ENST00000464480 FAM13BQ9NYF5 915 aa6.31□□□□□ -1.4
HMGXB4-205ENST00000464480 AMOTL2Q9Y2J4 779 aa6.31□□□□□ -1.4
HMGXB4-205ENST00000464480 DYRK1BQ9Y463 629 aa6.31□□□□□ -1.4
HMGXB4-205ENST00000464480 SNRPBP14678 240 aaKnown RBP6.3□□□□□ -1.4
HMGXB4-205ENST00000464480 ZAP70P43403 619 aa6.3□□□□□ -1.4
HMGXB4-205ENST00000464480 PGBD3Q8N328 593 aa6.3□□□□□ -1.4
HMGXB4-205ENST00000464480 FOXD4L4Q8WXT5 416 aaPredicted RBP6.3□□□□□ -1.4
HMGXB4-205ENST00000464480 ZNF775Q96BV0 537 aaPredicted RBP6.3□□□□□ -1.4
HMGXB4-205ENST00000464480 SUSD3Q96L08 255 aa6.3□□□□□ -1.4
HMGXB4-205ENST00000464480 CITED4Q96RK1 184 aa6.3□□□□□ -1.4
HMGXB4-205ENST00000464480 RBCK1Q9BYM8 510 aa6.3□□□□□ -1.4
HMGXB4-205ENST00000464480 GJA3Q9Y6H8 435 aa6.3□□□□□ -1.4
HMGXB4-205ENST00000464480 ANKRD33BA6NCL7 494 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 FZD6O60353 706 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 F11P03951 625 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 PCSK2P16519 638 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 USP5P45974 858 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 PDE3BQ13370 1112 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 RGL4Q8IZJ4 473 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 TMC1Q8TDI8 760 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 HSH2DQ96JZ2 352 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 CRISPLD1Q9H336 500 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 GPAMQ9HCL2 828 aa6.29□□□□□ -1.4
HMGXB4-205ENST00000464480 A0A1W2PNR3 127 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 ZBTB39O15060 712 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 MICAL2O94851 1124 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 EPB42P16452 691 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 MZF1P28698 734 aaPredicted RBP6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 DNM1Q05193 864 aaKnown RBP6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 EFHC2Q5JST6 749 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 FAM26DQ5JW98 314 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 NPM2Q86SE8 214 aaKnown RBP6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 ATCAYQ86WG3 371 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 SLC16A10Q8TF71 515 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 C7orf43Q8WVR3 580 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 EDEM1Q92611 657 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 ZIC5Q96T25 663 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 GAS2L1Q99501 681 aaPredicted RBP6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 CCDC87Q9NVE4 849 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 BCS1LQ9Y276 419 aa6.28□□□□□ -1.4
HMGXB4-205ENST00000464480 RPLP1P05386 114 aaKnown RBP6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 IDH3AP50213 366 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 ARSDP51689 593 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 LBRQ14739 615 aaKnown RBP6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 LRRC69Q6ZNQ3 347 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 BTLAQ7Z6A9 289 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 NLRP8Q86W28 1048 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 NPAS4Q8IUM7 802 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 ZNF280CQ8ND82 737 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 TTC16Q8NEE8 873 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 DMRTB1Q96MA1 342 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 RUBCNLQ9H714 662 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 POLIQ9UNA4 740 aa6.27□□□□□ -1.41
HMGXB4-205ENST00000464480 PDGFAP04085 211 aa6.26□□□□□ -1.41
HMGXB4-205ENST00000464480 PTSQ03393 145 aa6.26□□□□□ -1.41
HMGXB4-205ENST00000464480 EHHADHQ08426 723 aa6.26□□□□□ -1.41
HMGXB4-205ENST00000464480 COL19A1Q14993 1142 aa6.26□□□□□ -1.41
HMGXB4-205ENST00000464480 TMC7Q7Z402 723 aa6.26□□□□□ -1.41
HMGXB4-205ENST00000464480 NPAS3Q8IXF0 933 aa6.26□□□□□ -1.41
HMGXB4-205ENST00000464480 GJD3Q8N144 294 aa6.26□□□□□ -1.41
HMGXB4-205ENST00000464480 PIK3R5Q8WYR1 880 aa6.26□□□□□ -1.41
HMGXB4-205ENST00000464480 SENP3-EIF4A1A0A087X0R7 540 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 SOBPA7XYQ1 873 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 H7C1W4 665 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 WFS1O76024 890 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 TYRO3Q06418 890 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 SAMD5Q5TGI4 173 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 FIGNL1Q6PIW4 674 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 TREML4Q6UXN2 200 aa6.25□□□□□ -1.41
HMGXB4-205ENST00000464480 RIPOR1Q6ZS17 1223 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms