RNA–Protein interactions for RNA: ENST00000464429.1

CACNA1D-204, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-204ENST00000464429 NBPF26B4DH59 902 aa11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 RGL2O15211 777 aa11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 CCDC30Q5VVM6 783 aa11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 NBPF10Q6P3W6 841 aaKnown RBP11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 COL23A1Q86Y22 540 aaPredicted RBP11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 NBPF15Q8N660 670 aa11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 TSPYL6Q8N831 410 aa11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 ZNF428Q96B54 188 aa11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 CDCA7LQ96GN5 454 aa11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 MTFR1LQ9H019 292 aa11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 DDX21Q9NR30 783 aaKnown RBP eCLIP11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 DBF4Q9UBU7 674 aaPredicted RBP11.3□□□□□ -0.6
CACNA1D-204ENST00000464429 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
CACNA1D-204ENST00000464429 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
CACNA1D-204ENST00000464429 ELL2O00472 640 aaPredicted RBP11.29□□□□□ -0.6
CACNA1D-204ENST00000464429 RFC4P35249 363 aa11.29□□□□□ -0.6
CACNA1D-204ENST00000464429 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
CACNA1D-204ENST00000464429 STK31Q9BXU1 1019 aa11.29□□□□□ -0.6
CACNA1D-204ENST00000464429 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
CACNA1D-204ENST00000464429 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
CACNA1D-204ENST00000464429 ZPR1O75312 459 aa11.28□□□□□ -0.6
CACNA1D-204ENST00000464429 PIP4K2AP48426 406 aaPredicted RBP11.28□□□□□ -0.6
CACNA1D-204ENST00000464429 PDIA6Q15084 440 aa11.28□□□□□ -0.6
CACNA1D-204ENST00000464429 KIF6Q6ZMV9 814 aa11.28□□□□□ -0.6
CACNA1D-204ENST00000464429 LRP10Q7Z4F1 713 aa11.28□□□□□ -0.6
CACNA1D-204ENST00000464429 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
CACNA1D-204ENST00000464429 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
CACNA1D-204ENST00000464429 HYPKQ9NX55 129 aa11.28□□□□□ -0.6
CACNA1D-204ENST00000464429 NARFQ9UHQ1 456 aa11.28□□□□□ -0.6
CACNA1D-204ENST00000464429 ATP10DQ9P241 1426 aa11.27□□□□□ -0.6
CACNA1D-204ENST00000464429 VAMP4O75379 141 aa11.27□□□□□ -0.61
CACNA1D-204ENST00000464429 MYL6BP14649 208 aa11.27□□□□□ -0.61
CACNA1D-204ENST00000464429 EVX2Q03828 476 aa11.27□□□□□ -0.61
CACNA1D-204ENST00000464429 PROSER3Q2NL68 480 aa11.27□□□□□ -0.61
CACNA1D-204ENST00000464429 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.61
CACNA1D-204ENST00000464429 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.61
CACNA1D-204ENST00000464429 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
CACNA1D-204ENST00000464429 ARFGEF2Q9Y6D5 1785 aa11.26□□□□□ -0.61
CACNA1D-204ENST00000464429 CAMTA2O94983 1202 aa11.26□□□□□ -0.61
CACNA1D-204ENST00000464429 GYS1P13807 737 aa11.26□□□□□ -0.61
CACNA1D-204ENST00000464429 PDGFDQ9GZP0 370 aaPredicted RBP11.26□□□□□ -0.61
CACNA1D-204ENST00000464429 MAP3K15Q6ZN16 1313 aa11.26□□□□□ -0.61
CACNA1D-204ENST00000464429 ERVV-1B6SEH8 477 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 ZBTB7AO95365 584 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 ANXA1P04083 346 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 POLD1P28340 1107 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 ALDH1L2Q3SY69 923 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 USPL1Q5W0Q7 1092 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 CLEC4GQ6UXB4 293 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 SMIM5Q71RC9 77 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 NLGN1Q8N2Q7 840 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 XAGE3Q8WTP9 111 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 SPON1Q9HCB6 807 aa11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 SRP68Q9UHB9 627 aaKnown RBP11.25□□□□□ -0.61
CACNA1D-204ENST00000464429 NRXN2Q9P2S2 1712 aa11.24□□□□□ -0.61
CACNA1D-204ENST00000464429 DDX58O95786 925 aaKnown RBP11.24□□□□□ -0.61
CACNA1D-204ENST00000464429 TBC1D2BQ9UPU7 963 aa11.24□□□□□ -0.61
CACNA1D-204ENST00000464429 CARMIL3Q8ND23 1372 aa11.24□□□□□ -0.61
CACNA1D-204ENST00000464429 IBTKQ9P2D0 1353 aaPredicted RBP11.24□□□□□ -0.61
CACNA1D-204ENST00000464429 NUP98P52948 1817 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 FLIIQ13045 1269 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 FKBP8Q14318 412 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 HSP90AB3PQ58FF7 597 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 MSL1Q68DK7 614 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 COPS6Q7L5N1 327 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 SGIP1Q9BQI5 828 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 BCL2L12Q9HB09 334 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 KIF16BQ96L93 1317 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 PXDNLA1KZ92 1463 aa11.23□□□□□ -0.61
CACNA1D-204ENST00000464429 BRPF1P55201 1214 aaPredicted RBP11.22□□□□□ -0.61
CACNA1D-204ENST00000464429 AIMP1Q12904 312 aaKnown RBP11.22□□□□□ -0.61
CACNA1D-204ENST00000464429 GIGYF2Q6Y7W6 1299 aaKnown RBP11.22□□□□□ -0.61
CACNA1D-204ENST00000464429 C10orf71Q711Q0 1435 aa11.22□□□□□ -0.61
CACNA1D-204ENST00000464429 N4BP2Q86UW6 1770 aaPredicted RBP11.22□□□□□ -0.61
CACNA1D-204ENST00000464429 PLBD2Q8NHP8 589 aa11.22□□□□□ -0.61
CACNA1D-204ENST00000464429 ARXQ96QS3 562 aa11.22□□□□□ -0.61
CACNA1D-204ENST00000464429 ZBTB3Q9H5J0 574 aa11.22□□□□□ -0.61
CACNA1D-204ENST00000464429 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
CACNA1D-204ENST00000464429 PTPRCP08575 1304 aa11.21□□□□□ -0.61
CACNA1D-204ENST00000464429 MMP10P09238 476 aa11.21□□□□□ -0.61
CACNA1D-204ENST00000464429 PTGER2P43116 358 aa11.21□□□□□ -0.61
CACNA1D-204ENST00000464429 ANKRD13DQ6ZTN6 518 aa11.21□□□□□ -0.61
CACNA1D-204ENST00000464429 SSH1Q8WYL5 1049 aa11.21□□□□□ -0.61
CACNA1D-204ENST00000464429 PHAXQ9H814 394 aaKnown RBP11.21□□□□□ -0.61
CACNA1D-204ENST00000464429 CREBZFQ9NS37 354 aa11.21□□□□□ -0.61
CACNA1D-204ENST00000464429 ADCY9O60503 1353 aa11.2□□□□□ -0.62
CACNA1D-204ENST00000464429 RNF123Q5XPI4 1314 aa11.2□□□□□ -0.62
CACNA1D-204ENST00000464429 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
CACNA1D-204ENST00000464429 RARSP54136 660 aaKnown RBP11.2□□□□□ -0.62
CACNA1D-204ENST00000464429 FKBP5Q13451 457 aaPredicted RBP11.2□□□□□ -0.62
CACNA1D-204ENST00000464429 NFIXQ14938 502 aa11.2□□□□□ -0.62
CACNA1D-204ENST00000464429 PARP10Q53GL7 1025 aa11.2□□□□□ -0.62
CACNA1D-204ENST00000464429 MRPL50Q8N5N7 158 aaKnown RBP11.2□□□□□ -0.62
CACNA1D-204ENST00000464429 PARP3Q9Y6F1 533 aa11.2□□□□□ -0.62
CACNA1D-204ENST00000464429 KIF13BQ9NQT8 1826 aa11.2□□□□□ -0.62
CACNA1D-204ENST00000464429 RIC1Q4ADV7 1423 aa11.19□□□□□ -0.62
CACNA1D-204ENST00000464429 AFDNP55196 1824 aaKnown RBP11.19□□□□□ -0.62
CACNA1D-204ENST00000464429 POLRMTO00411 1230 aaKnown RBP11.19□□□□□ -0.62
CACNA1D-204ENST00000464429 TM4SF1P30408 202 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms