RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 KLRG2A4D1S0 409 aaPredicted RBP27.04■■□□□ 1.92
PDLIM4-205ENST00000463615 ERVV-1B6SEH8 477 aa27.04■■□□□ 1.92
PDLIM4-205ENST00000463615 STYK1Q6J9G0 422 aa27.04■■□□□ 1.92
PDLIM4-205ENST00000463615 SRGNP10124 158 aa27.03■■□□□ 1.92
PDLIM4-205ENST00000463615 LMNB1P20700 586 aa27.03■■□□□ 1.92
PDLIM4-205ENST00000463615 NBPF5PQ86XG9 351 aaPredicted RBP27.03■■□□□ 1.92
PDLIM4-205ENST00000463615 CCDC24Q8N4L8 307 aa27.03■■□□□ 1.92
PDLIM4-205ENST00000463615 PRKRIP1Q9H875 184 aaPredicted RBP27.03■■□□□ 1.92
PDLIM4-205ENST00000463615 TSPYL4Q9UJ04 414 aa27.02■■□□□ 1.92
PDLIM4-205ENST00000463615 NIP7Q9Y221 180 aaKnown RBP eCLIP27.02■■□□□ 1.92
PDLIM4-205ENST00000463615 NFKBIEO00221 500 aa27.01■■□□□ 1.91
PDLIM4-205ENST00000463615 RASSF7Q02833 373 aa27.01■■□□□ 1.91
PDLIM4-205ENST00000463615 HLFQ16534 295 aa27.01■■□□□ 1.91
PDLIM4-205ENST00000463615 TPTE2Q6XPS3 522 aa27.01■■□□□ 1.91
PDLIM4-205ENST00000463615 CNKSR1Q969H4 720 aa27.01■■□□□ 1.91
PDLIM4-205ENST00000463615 ZNF622Q969S3 477 aaKnown RBP eCLIP27.01■■□□□ 1.91
PDLIM4-205ENST00000463615 RUNDC1Q96C34 613 aa27.01■■□□□ 1.91
PDLIM4-205ENST00000463615 NPHP1O15259 732 aa27■■□□□ 1.91
PDLIM4-205ENST00000463615 TOMM70O94826 608 aa27■■□□□ 1.91
PDLIM4-205ENST00000463615 PRELPP51888 382 aa27■■□□□ 1.91
PDLIM4-205ENST00000463615 MASTLQ96GX5 879 aa27■■□□□ 1.91
PDLIM4-205ENST00000463615 NMRK2Q9NPI5 230 aa27■■□□□ 1.91
PDLIM4-205ENST00000463615 MAP3K15Q6ZN16 1313 aa26.99■■□□□ 1.91
PDLIM4-205ENST00000463615 KDM2BQ8NHM5 1336 aa26.99■■□□□ 1.91
PDLIM4-205ENST00000463615 ARFGEF2Q9Y6D5 1785 aa26.99■■□□□ 1.91
PDLIM4-205ENST00000463615 HSPA6P17066 643 aa26.98■■□□□ 1.91
PDLIM4-205ENST00000463615 WDR43Q15061 677 aaKnown RBP eCLIP26.98■■□□□ 1.91
PDLIM4-205ENST00000463615 LTBP3Q9NS15 1303 aa26.97■■□□□ 1.91
PDLIM4-205ENST00000463615 RRP7AQ9Y3A4 280 aaKnown RBP26.97■■□□□ 1.91
PDLIM4-205ENST00000463615 FER1L6Q2WGJ9 1857 aa26.96■■□□□ 1.91
PDLIM4-205ENST00000463615 TTLL7Q6ZT98 887 aa26.96■■□□□ 1.91
PDLIM4-205ENST00000463615 LRP10Q7Z4F1 713 aa26.96■■□□□ 1.91
PDLIM4-205ENST00000463615 ADAMTS8Q9UP79 889 aa26.96■■□□□ 1.91
PDLIM4-205ENST00000463615 IBTKQ9P2D0 1353 aaPredicted RBP26.96■■□□□ 1.91
PDLIM4-205ENST00000463615 CHL1O00533 1208 aa26.95■■□□□ 1.9
PDLIM4-205ENST00000463615 C21orf2O43822 256 aa26.95■■□□□ 1.9
PDLIM4-205ENST00000463615 SOGA3Q5TF21 947 aa26.95■■□□□ 1.9
PDLIM4-205ENST00000463615 PRPF40BQ6NWY9 871 aaKnown RBP26.95■■□□□ 1.9
PDLIM4-205ENST00000463615 KIF6Q6ZMV9 814 aa26.95■■□□□ 1.9
PDLIM4-205ENST00000463615 CCDC146Q8IYE0 955 aa26.95■■□□□ 1.9
PDLIM4-205ENST00000463615 TRIM35Q9UPQ4 493 aa26.95■■□□□ 1.9
PDLIM4-205ENST00000463615 NUP98P52948 1817 aa26.95■■□□□ 1.9
PDLIM4-205ENST00000463615 NPR1P16066 1061 aa26.94■■□□□ 1.9
PDLIM4-205ENST00000463615 PDIA6Q15084 440 aa26.94■■□□□ 1.9
PDLIM4-205ENST00000463615 C7orf43Q8WVR3 580 aa26.94■■□□□ 1.9
PDLIM4-205ENST00000463615 SLX4Q8IY92 1834 aa26.94■■□□□ 1.9
PDLIM4-205ENST00000463615 RIC1Q4ADV7 1423 aa26.93■■□□□ 1.9
PDLIM4-205ENST00000463615 TNRC6CQ9HCJ0 1690 aaKnown RBP26.93■■□□□ 1.9
PDLIM4-205ENST00000463615 MYL6BP14649 208 aa26.93■■□□□ 1.9
PDLIM4-205ENST00000463615 RBM46Q8TBY0 533 aaKnown RBP26.93■■□□□ 1.9
PDLIM4-205ENST00000463615 NYXQ9GZU5 481 aa26.93■■□□□ 1.9
PDLIM4-205ENST00000463615 NGEFQ8N5V2 710 aa26.92■■□□□ 1.9
PDLIM4-205ENST00000463615 GLTPD2A6NH11 291 aa26.91■■□□□ 1.9
PDLIM4-205ENST00000463615 GIGYF2Q6Y7W6 1299 aaKnown RBP26.91■■□□□ 1.9
PDLIM4-205ENST00000463615 ZNF34Q8IZ26 560 aa26.91■■□□□ 1.9
PDLIM4-205ENST00000463615 CCDC88AQ3V6T2 1871 aa26.89■■□□□ 1.9
PDLIM4-205ENST00000463615 DICER1Q9UPY3 1922 aaKnown RBP26.89■■□□□ 1.9
PDLIM4-205ENST00000463615 NEUROD2Q15784 382 aa26.89■■□□□ 1.9
PDLIM4-205ENST00000463615 CRY2Q49AN0 593 aa26.89■■□□□ 1.9
PDLIM4-205ENST00000463615 TAOK3Q9H2K8 898 aa26.89■■□□□ 1.9
PDLIM4-205ENST00000463615 TIAM2Q8IVF5 1701 aa26.89■■□□□ 1.9
PDLIM4-205ENST00000463615 ZBTB3Q9H5J0 574 aa26.88■■□□□ 1.89
PDLIM4-205ENST00000463615 UBN2Q6ZU65 1347 aa26.88■■□□□ 1.89
PDLIM4-205ENST00000463615 CEP350Q5VT06 3117 aa26.87■■□□□ 1.89
PDLIM4-205ENST00000463615 FAM177BA6PVY3 158 aa26.87■■□□□ 1.89
PDLIM4-205ENST00000463615 HOXB7P09629 217 aa26.87■■□□□ 1.89
PDLIM4-205ENST00000463615 EIF2S2P20042 333 aaKnown RBP26.87■■□□□ 1.89
PDLIM4-205ENST00000463615 GTF2E1P29083 439 aaPredicted RBP26.87■■□□□ 1.89
PDLIM4-205ENST00000463615 ZEB1P37275 1124 aaPredicted RBP26.87■■□□□ 1.89
PDLIM4-205ENST00000463615 RRAGCQ9HB90 399 aa26.87■■□□□ 1.89
PDLIM4-205ENST00000463615 ZNF219Q9P2Y4 722 aaPredicted RBP26.87■■□□□ 1.89
PDLIM4-205ENST00000463615 ABCC12Q96J65 1359 aa26.86■■□□□ 1.89
PDLIM4-205ENST00000463615 ALDH1B1P30837 517 aa26.86■■□□□ 1.89
PDLIM4-205ENST00000463615 FSTL1Q12841 308 aa26.86■■□□□ 1.89
PDLIM4-205ENST00000463615 PROSER3Q2NL68 480 aa26.85■■□□□ 1.89
PDLIM4-205ENST00000463615 PARP10Q53GL7 1025 aa26.85■■□□□ 1.89
PDLIM4-205ENST00000463615 CCDC93Q567U6 631 aa26.85■■□□□ 1.89
PDLIM4-205ENST00000463615 C16orf71Q8IYS4 520 aaPredicted RBP26.85■■□□□ 1.89
PDLIM4-205ENST00000463615 CFAP44Q96MT7 982 aa26.85■■□□□ 1.89
PDLIM4-205ENST00000463615 CACNA1SQ13698 1873 aa26.85■■□□□ 1.89
PDLIM4-205ENST00000463615 ERFEQ4G0M1 354 aa26.84■■□□□ 1.89
PDLIM4-205ENST00000463615 SUSD4Q5VX71 490 aa26.84■■□□□ 1.89
PDLIM4-205ENST00000463615 DDX21Q9NR30 783 aaKnown RBP eCLIP26.84■■□□□ 1.89
PDLIM4-205ENST00000463615 NTSR2O95665 410 aa26.83■■□□□ 1.89
PDLIM4-205ENST00000463615 VEGFAP15692 232 aaPredicted RBP26.83■■□□□ 1.89
PDLIM4-205ENST00000463615 GPTP24298 496 aa26.83■■□□□ 1.89
PDLIM4-205ENST00000463615 HOXA10P31260 410 aaPredicted RBP26.83■■□□□ 1.89
PDLIM4-205ENST00000463615 APLP1P51693 650 aa26.83■■□□□ 1.89
PDLIM4-205ENST00000463615 NUTM1Q86Y26 1132 aa26.83■■□□□ 1.89
PDLIM4-205ENST00000463615 WDR90Q96KV7 1748 aa26.82■■□□□ 1.88
PDLIM4-205ENST00000463615 DPY19L2Q6NUT2 758 aa26.82■■□□□ 1.88
PDLIM4-205ENST00000463615 ZNF853P0CG23 659 aa26.81■■□□□ 1.88
PDLIM4-205ENST00000463615 PPP1R42Q7Z4L9 355 aa26.81■■□□□ 1.88
PDLIM4-205ENST00000463615 RTKN2Q8IZC4 609 aa26.81■■□□□ 1.88
PDLIM4-205ENST00000463615 RNF123Q5XPI4 1314 aa26.81■■□□□ 1.88
PDLIM4-205ENST00000463615 SNED1Q8TER0 1413 aa26.81■■□□□ 1.88
PDLIM4-205ENST00000463615 ANXA1P04083 346 aa26.8■■□□□ 1.88
PDLIM4-205ENST00000463615 FKBP4Q02790 459 aaKnown RBP eCLIP26.8■■□□□ 1.88
PDLIM4-205ENST00000463615 KRT24Q2M2I5 525 aa26.8■■□□□ 1.88
PDLIM4-205ENST00000463615 SLC10A5Q5PT55 438 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms